Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yhhW [C]

Identifier: 91788757

GI number: 91788757

Start: 3058663

End: 3059547

Strand: Reverse

Name: yhhW [C]

Synonym: Bpro_2897

Alternate gene names: 91788757

Gene position: 3059547-3058663 (Counterclockwise)

Preceding gene: 91788758

Following gene: 91788756

Centisome position: 58.83

GC content: 62.94

Gene sequence:

>885_bases
ATGAGCGTGCAACTCAAGCTGACCGGGCACAACAAGGATCTGGGCGGAGGCTTCGTGGTGCGGCGCCTGTTGCCTGCGGT
GCAGAGGCAGTCTGTGGGGCCTTTCATCTTTTTTGATCACTTCGGCCCGGTCACGGTGCAGCCGGGCGCCAGCCATGATG
TGCGGCCGCATCCGCATATCGGGTTGGCCACGGTCACTTACCTGTTTGAAGGCGCGATGATGCATCGCGACAGCGTGGGC
TCTGTCCAGCGCATCGAGCCTGGCGCGATCAACTGGATGACGGCCGGGCGCGGCATCGTGCACTCCGAGCGCGCGCCCGA
GGATCTGCGGAACAAGGCTTATGTGAACCATGGCCTGCAGCTGTGGGCTGCCTTGCCGCAGGCTTATGAAGAAGCGGCCC
CCTGCTTTTCACACACTCCCGCGTCGGCCATTCCCGCGGTGTCGGTGGGCGGAGCCGACGTGCGCGTGCTGATTGGCGAG
GCGTTTGGCGCAACATCGCCGGTCAAGACATTCTCCAAAACGATTTACCTGGATATCCAACTCGCGGCAAATGCGGCGCT
GCAATTGCCGGCGCTGGCCGAGGAGCTTGCGCTTTATGCCGTGGAGGGGGATGTGACAGTGGACGGCGAGCCGGTTGTGG
CTGGCACCCTGGCCACTTTGGCGGCTGGTACTGTCGTGACCATCGGTAGCAGCGCGCCGGCGCGGCTGGTGGTGATAGGC
GGTGAGCCGCTCGATGCCCCCCGGTTTATCTGGTGGAACTTTGTGTCCAGCCAGAAGGCGCGCATTGTGCAAGCCAGTGA
TGACTGGGAGGCTCAAGCCATGGGTCATGTGGGCGGGGAAACCGAATTCATTCCCCTGCCTGAACGAAAGTTCGCCGTCA
GTTAG

Upstream 100 bases:

>100_bases
CCCAGCTGGAGGAGTTGCAGGCGGTTGCGCAAAAATGCCCCGTCCACAAACTGATGACCACCGTTACCACTGAAATCACA
ACCAATGTGGAGAGGCTGTC

Downstream 100 bases:

>100_bases
GAACTGCCTTTTCGCGTCGATTTTTTGGAAGTATCTTGCACGTAAGATGGTGCGATGAAAATCTTCGCGCTGCTTCCCTG
GAGTGACTGGCTGGCCATCG

Product: Pirin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSVQLKLTGHNKDLGGGFVVRRLLPAVQRQSVGPFIFFDHFGPVTVQPGASHDVRPHPHIGLATVTYLFEGAMMHRDSVG
SVQRIEPGAINWMTAGRGIVHSERAPEDLRNKAYVNHGLQLWAALPQAYEEAAPCFSHTPASAIPAVSVGGADVRVLIGE
AFGATSPVKTFSKTIYLDIQLAANAALQLPALAEELALYAVEGDVTVDGEPVVAGTLATLAAGTVVTIGSSAPARLVVIG
GEPLDAPRFIWWNFVSSQKARIVQASDDWEAQAMGHVGGETEFIPLPERKFAVS

Sequences:

>Translated_294_residues
MSVQLKLTGHNKDLGGGFVVRRLLPAVQRQSVGPFIFFDHFGPVTVQPGASHDVRPHPHIGLATVTYLFEGAMMHRDSVG
SVQRIEPGAINWMTAGRGIVHSERAPEDLRNKAYVNHGLQLWAALPQAYEEAAPCFSHTPASAIPAVSVGGADVRVLIGE
AFGATSPVKTFSKTIYLDIQLAANAALQLPALAEELALYAVEGDVTVDGEPVVAGTLATLAAGTVVTIGSSAPARLVVIG
GEPLDAPRFIWWNFVSSQKARIVQASDDWEAQAMGHVGGETEFIPLPERKFAVS
>Mature_293_residues
SVQLKLTGHNKDLGGGFVVRRLLPAVQRQSVGPFIFFDHFGPVTVQPGASHDVRPHPHIGLATVTYLFEGAMMHRDSVGS
VQRIEPGAINWMTAGRGIVHSERAPEDLRNKAYVNHGLQLWAALPQAYEEAAPCFSHTPASAIPAVSVGGADVRVLIGEA
FGATSPVKTFSKTIYLDIQLAANAALQLPALAEELALYAVEGDVTVDGEPVVAGTLATLAAGTVVTIGSSAPARLVVIGG
EPLDAPRFIWWNFVSSQKARIVQASDDWEAQAMGHVGGETEFIPLPERKFAVS

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=282, Percent_Identity=32.9787234042553, Blast_Score=128, Evalue=7e-30,
Organism=Homo sapiens, GI4505823, Length=282, Percent_Identity=32.9787234042553, Blast_Score=128, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: NA

Molecular weight: Translated: 31244; Mature: 31113

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQLKLTGHNKDLGGGFVVRRLLPAVQRQSVGPFIFFDHFGPVTVQPGASHDVRPHPHI
CEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCCCCCCCC
GLATVTYLFEGAMMHRDSVGSVQRIEPGAINWMTAGRGIVHSERAPEDLRNKAYVNHGLQ
HHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHH
LWAALPQAYEEAAPCFSHTPASAIPAVSVGGADVRVLIGEAFGATSPVKTFSKTIYLDIQ
HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCHHHCCEEEEEEEE
LAANAALQLPALAEELALYAVEGDVTVDGEPVVAGTLATLAAGTVVTIGSSAPARLVVIG
EECCCEEECHHHHHHHEEEEECCCEEECCCCEEHHHHHHHHCCEEEEECCCCCEEEEEEC
GEPLDAPRFIWWNFVSSQKARIVQASDDWEAQAMGHVGGETEFIPLPERKFAVS
CCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
SVQLKLTGHNKDLGGGFVVRRLLPAVQRQSVGPFIFFDHFGPVTVQPGASHDVRPHPHI
EEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCCCCCCCCCC
GLATVTYLFEGAMMHRDSVGSVQRIEPGAINWMTAGRGIVHSERAPEDLRNKAYVNHGLQ
HHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEECCCCEEECCCCCHHHHHHHHHHHHHH
LWAALPQAYEEAAPCFSHTPASAIPAVSVGGADVRVLIGEAFGATSPVKTFSKTIYLDIQ
HHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCHHHCCEEEEEEEE
LAANAALQLPALAEELALYAVEGDVTVDGEPVVAGTLATLAAGTVVTIGSSAPARLVVIG
EECCCEEECHHHHHHHEEEEECCCEEECCCCEEHHHHHHHHCCEEEEECCCCCEEEEEEC
GEPLDAPRFIWWNFVSSQKARIVQASDDWEAQAMGHVGGETEFIPLPERKFAVS
CCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]