Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91788732
Identifier: 91788732
GI number: 91788732
Start: 3025913
End: 3028804
Strand: Reverse
Name: 91788732
Synonym: Bpro_2871
Alternate gene names: NA
Gene position: 3028804-3025913 (Counterclockwise)
Preceding gene: 91788733
Following gene: 91788726
Centisome position: 58.24
GC content: 66.08
Gene sequence:
>2892_bases ATGCTGCGTTTTCCCATGTCCAAATCTTCCAAAGCCGACGCTACTCCGGCACATGCATCCACCGTGAAAACCGGCCCGGC CAAATCGGCCGAAGCCCATCCGCTGGACGGCCTGACGGGCGGCGCGTTTTCAGCGCCCACCTCGGGCGAGCGCGCGGCGC GCATCCGTCAGTGGCTGGCGACGGAACCCACAGCGGAGCAGATGGCCGAGGTTTACAAGGACCTGGCCAACCGCGACAAG GGCGCCGCCAAACCCCTCAAGGAAAAGCTCGACGAGGTCAAGCGCAGCAAGGGCCAGGAAGCCGTGGCGGCCGAATGGGC TGAAAAAGCGCAGGGCCTGCTGGCCTTGCCCAAACTCAATCTGGCTGATGCCCTGGCCTGGCAGCGTGACGCCGCCAAGG CTGGAGCGCCCTTGTCCCGGGAACCGCTGGCCGGCCTGAAGGTACAACTGGCCGAGCGCGTCAAGACCATCGAAGACCTG CAGCACCGCACCCAGGTGCAGCGCGAAGCCGCCGTGCTGATTGCGCAGCGCATCGAGGTGTTGTCCATCAAACCCTGGCG CGATGCGCAAGCCGCGCTCGATACCCTGCGCACCGACGTGACGCACTGGCAGAACCAGGCCGACGAAATCATGCACGACG CCAACTGGGCCAGCGTCGACGCGAAATTTCCTCCGCTGCTGGACGCCTCGCGTGGCCAGTTGCTGGCTGTCTGGGAGGCC TTCCAGGGAGCACTGGCCGTGGCCGTGAAAGCTGCGGAGGATGCGGCGGCGCCACTGCCCGCCGTGCCCGTGTGGGCCGA CGAGTTGCGCGCCGCGCGTGGCGTTCCGGCACCCGCGGGCGAGCAGCCGGCGCGCGCGCCCAAGGCCAAAATCGATCCTG CTGTCTTGAAGGACATGCGCGAGAAGGCGACGGCGGCTGTGCAGGAAGCGCTGGCCAGGCTGGAGCACGAAGTGACGGAA GGCCATGGCAAGTCCACGCCCAAAGTCGCGGCTGACCTGCGCCATGCGCTGAAAGAGCATATCCGCCACATCGACAGCAA GCTCGAAGCCGCTGCGCACGCTGCGCTGACGGCGGCCGGCGAACTGGAAGGCTGGCAGCGCTGGCGCGCCGACCAGATCC GCGAAGAGCTGGTCGTGAAAGCCGAAGCGCTGGTGGCACACCCCATGGGCGGCCGCAAGCAGCAGGAAGCCCTGCGCGCC ATGCGCGAGCAGTGGAAGACCAGCGACCAGGGCGGCACGCCCAACCATGCGCTGTGGAAGCGCTTTGACGATGCCTGCAA TGAAGCCCATAAAGTGGTCGAAACCTGGCTCGAAAAAGTCAAGGAGCAGACGGAGGCCAGCAAGGCGCAGCGCCACGCAC TGATTGAAGAAGTGCTGGCCTGGGCCGAAGCCCACAAGACCAACACCGACTGGAAGCACCACATTCGCAGCCTCAACGGG TTTGTGGAGAAATGGCGCGAAGCGGGGCACCTGGGTGAAAAGGCCTTTGCCGAAATCCAGCCTGTCTGGAAAGCCGCCAT GGATGCGGCTGATGCACCGCTGACGGCCGCCCGCAACGAGAGCCTGGCGCGCCGCAAGGCCATGATTGAAGAGGCGCAAG TTCTGGGGGCTGAGCCCCAGTTGCGCATTGATGCCGTCAAGACCCTGCAGCAGCGCTGGCAGCATGAGGCGCAAAGTGTG CCGATTGAGCGCAAGCAGGAGCAAAAACTGTGGGACGCTTTTCGCAAGCCGATTGATGACGCCTTCCAGCGGAAAACCGC CGAGCGCGAAAAAGCAGCAGCTGCGCTCGGCGAGTTCGACCGCATGGTGCTCGAGGCCTCCAAAGCGGTGGAGGCCGCCA CGGCCAGCGGCGATGCGCAAAAAATCCACGCCGCCGCCAAGGCGCTTGAGGCGATTGTTCGTGGCCAGGTTCCCGTGCCG GCCCCTGCGCCCGTGCCTGCACCTGCGGCTACATCGGAGTCCGAAGTGCCGTCGGCGGCTTCGGTCGAGGCTGTGCTTGC CGCCGCCAACGAAACACCTGTTGCAGCAGGAGATGATGCCGAAGCCTCCGTTGAATCTACGCAGGAAGCTACAGAAACAG TAGCAGACCAATCGCCCGTCATGGAAGCCGCTTCTGAAGCGGCCGCCACCGAGTTTGCGCAAGCCGGCGAGCCCGCCTCT GCACCCGCTGAACCCCCACCACCGCCCAAAGCCGCACCCAGGCCCATCGTGGCCATGCGCGGTGACGACCGCCCCGGCAT GCGCAAGGCTGAAGCAGCGCCCGCAGGACGAGGCGGTAAATTCGGTGACCGCAAGGATTCGCGCCCGGGCGGCCCGCGCC AAAGCACGGACAACAAGTTCGAGCCTTACCGCCCCGACCGCGATGGCAGCCGTTCCGGCCGTGACGACCGGGGCCCTCGT GACAATGACCGCCCGGCCTTCGAAGACCGCGGTCCGCGCCTGGGCGATGCCGCTTTCCGCGCCCAGCGCGAAGCCTTTGA GGCCGCCAACCACGCGCTCAAAAAGCTCGCCATGCAGGCCCATGGTGAAGTGCTGACCCACTTGATCACCGCCTGGGAAA AGCGCGATCCGTCGCTGTTGCCCGGCGCGCAGGAACTGGGCAAGCAGGTCGCTCCCGCTGTGCGCAACCGCTGGGTTCAG GCGGTTGGCGTGCCCTCAGGCAAGGATGCGTCCGAAGCCTTGTTGCGTCTGGAGATCGCCGCCGAACTGCCCACGCCTGC CGAGCACCTCAGTGCCCGCCGCATGTTGCAGTTGCAGCTGCTGACCCGGCGCAACGCACCCGCACCCGCTGAAACCTGGG GTGAAGACGCCGCTCAGGTGCTGGCAGCTGACTTCGATGCCGGCAACGCCAGGCGCGTGCAAAACGTGCTGAAGGTGCTG CTCAAGCGATGA
Upstream 100 bases:
>100_bases CAGCAAGTGCTGGCAGGCGCAAGCATCCCGGAGCATAGGGCGCTCCGGCTCGCGTGCCGTCTTCGGCTGTTTTCTCGAAC CGAGTGTTATTAATTTTTTT
Downstream 100 bases:
>100_bases GCTGACCTGTGAACTAGCCTCTCGCAGCCCTCGGGCTTGGGGAGCGCTGGATGCTCACTGTCGCACCGCATGATGCAGAG GTGCTATCAAATAAATAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 963; Mature: 963
Protein sequence:
>963_residues MLRFPMSKSSKADATPAHASTVKTGPAKSAEAHPLDGLTGGAFSAPTSGERAARIRQWLATEPTAEQMAEVYKDLANRDK GAAKPLKEKLDEVKRSKGQEAVAAEWAEKAQGLLALPKLNLADALAWQRDAAKAGAPLSREPLAGLKVQLAERVKTIEDL QHRTQVQREAAVLIAQRIEVLSIKPWRDAQAALDTLRTDVTHWQNQADEIMHDANWASVDAKFPPLLDASRGQLLAVWEA FQGALAVAVKAAEDAAAPLPAVPVWADELRAARGVPAPAGEQPARAPKAKIDPAVLKDMREKATAAVQEALARLEHEVTE GHGKSTPKVAADLRHALKEHIRHIDSKLEAAAHAALTAAGELEGWQRWRADQIREELVVKAEALVAHPMGGRKQQEALRA MREQWKTSDQGGTPNHALWKRFDDACNEAHKVVETWLEKVKEQTEASKAQRHALIEEVLAWAEAHKTNTDWKHHIRSLNG FVEKWREAGHLGEKAFAEIQPVWKAAMDAADAPLTAARNESLARRKAMIEEAQVLGAEPQLRIDAVKTLQQRWQHEAQSV PIERKQEQKLWDAFRKPIDDAFQRKTAEREKAAAALGEFDRMVLEASKAVEAATASGDAQKIHAAAKALEAIVRGQVPVP APAPVPAPAATSESEVPSAASVEAVLAAANETPVAAGDDAEASVESTQEATETVADQSPVMEAASEAAATEFAQAGEPAS APAEPPPPPKAAPRPIVAMRGDDRPGMRKAEAAPAGRGGKFGDRKDSRPGGPRQSTDNKFEPYRPDRDGSRSGRDDRGPR DNDRPAFEDRGPRLGDAAFRAQREAFEAANHALKKLAMQAHGEVLTHLITAWEKRDPSLLPGAQELGKQVAPAVRNRWVQ AVGVPSGKDASEALLRLEIAAELPTPAEHLSARRMLQLQLLTRRNAPAPAETWGEDAAQVLAADFDAGNARRVQNVLKVL LKR
Sequences:
>Translated_963_residues MLRFPMSKSSKADATPAHASTVKTGPAKSAEAHPLDGLTGGAFSAPTSGERAARIRQWLATEPTAEQMAEVYKDLANRDK GAAKPLKEKLDEVKRSKGQEAVAAEWAEKAQGLLALPKLNLADALAWQRDAAKAGAPLSREPLAGLKVQLAERVKTIEDL QHRTQVQREAAVLIAQRIEVLSIKPWRDAQAALDTLRTDVTHWQNQADEIMHDANWASVDAKFPPLLDASRGQLLAVWEA FQGALAVAVKAAEDAAAPLPAVPVWADELRAARGVPAPAGEQPARAPKAKIDPAVLKDMREKATAAVQEALARLEHEVTE GHGKSTPKVAADLRHALKEHIRHIDSKLEAAAHAALTAAGELEGWQRWRADQIREELVVKAEALVAHPMGGRKQQEALRA MREQWKTSDQGGTPNHALWKRFDDACNEAHKVVETWLEKVKEQTEASKAQRHALIEEVLAWAEAHKTNTDWKHHIRSLNG FVEKWREAGHLGEKAFAEIQPVWKAAMDAADAPLTAARNESLARRKAMIEEAQVLGAEPQLRIDAVKTLQQRWQHEAQSV PIERKQEQKLWDAFRKPIDDAFQRKTAEREKAAAALGEFDRMVLEASKAVEAATASGDAQKIHAAAKALEAIVRGQVPVP APAPVPAPAATSESEVPSAASVEAVLAAANETPVAAGDDAEASVESTQEATETVADQSPVMEAASEAAATEFAQAGEPAS APAEPPPPPKAAPRPIVAMRGDDRPGMRKAEAAPAGRGGKFGDRKDSRPGGPRQSTDNKFEPYRPDRDGSRSGRDDRGPR DNDRPAFEDRGPRLGDAAFRAQREAFEAANHALKKLAMQAHGEVLTHLITAWEKRDPSLLPGAQELGKQVAPAVRNRWVQ AVGVPSGKDASEALLRLEIAAELPTPAEHLSARRMLQLQLLTRRNAPAPAETWGEDAAQVLAADFDAGNARRVQNVLKVL LKR >Mature_963_residues MLRFPMSKSSKADATPAHASTVKTGPAKSAEAHPLDGLTGGAFSAPTSGERAARIRQWLATEPTAEQMAEVYKDLANRDK GAAKPLKEKLDEVKRSKGQEAVAAEWAEKAQGLLALPKLNLADALAWQRDAAKAGAPLSREPLAGLKVQLAERVKTIEDL QHRTQVQREAAVLIAQRIEVLSIKPWRDAQAALDTLRTDVTHWQNQADEIMHDANWASVDAKFPPLLDASRGQLLAVWEA FQGALAVAVKAAEDAAAPLPAVPVWADELRAARGVPAPAGEQPARAPKAKIDPAVLKDMREKATAAVQEALARLEHEVTE GHGKSTPKVAADLRHALKEHIRHIDSKLEAAAHAALTAAGELEGWQRWRADQIREELVVKAEALVAHPMGGRKQQEALRA MREQWKTSDQGGTPNHALWKRFDDACNEAHKVVETWLEKVKEQTEASKAQRHALIEEVLAWAEAHKTNTDWKHHIRSLNG FVEKWREAGHLGEKAFAEIQPVWKAAMDAADAPLTAARNESLARRKAMIEEAQVLGAEPQLRIDAVKTLQQRWQHEAQSV PIERKQEQKLWDAFRKPIDDAFQRKTAEREKAAAALGEFDRMVLEASKAVEAATASGDAQKIHAAAKALEAIVRGQVPVP APAPVPAPAATSESEVPSAASVEAVLAAANETPVAAGDDAEASVESTQEATETVADQSPVMEAASEAAATEFAQAGEPAS APAEPPPPPKAAPRPIVAMRGDDRPGMRKAEAAPAGRGGKFGDRKDSRPGGPRQSTDNKFEPYRPDRDGSRSGRDDRGPR DNDRPAFEDRGPRLGDAAFRAQREAFEAANHALKKLAMQAHGEVLTHLITAWEKRDPSLLPGAQELGKQVAPAVRNRWVQ AVGVPSGKDASEALLRLEIAAELPTPAEHLSARRMLQLQLLTRRNAPAPAETWGEDAAQVLAADFDAGNARRVQNVLKVL LKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104277; Mature: 104277
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRFPMSKSSKADATPAHASTVKTGPAKSAEAHPLDGLTGGAFSAPTSGERAARIRQWLA CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC TEPTAEQMAEVYKDLANRDKGAAKPLKEKLDEVKRSKGQEAVAAEWAEKAQGLLALPKLN CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEECCCCC LADALAWQRDAAKAGAPLSREPLAGLKVQLAERVKTIEDLQHRTQVQREAAVLIAQRIEV HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSIKPWRDAQAALDTLRTDVTHWQNQADEIMHDANWASVDAKFPPLLDASRGQLLAVWEA HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH FQGALAVAVKAAEDAAAPLPAVPVWADELRAARGVPAPAGEQPARAPKAKIDPAVLKDMR HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH EKATAAVQEALARLEHEVTEGHGKSTPKVAADLRHALKEHIRHIDSKLEAAAHAALTAAG HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELEGWQRWRADQIREELVVKAEALVAHPMGGRKQQEALRAMREQWKTSDQGGTPNHALWK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH RFDDACNEAHKVVETWLEKVKEQTEASKAQRHALIEEVLAWAEAHKTNTDWKHHIRSLNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FVEKWREAGHLGEKAFAEIQPVWKAAMDAADAPLTAARNESLARRKAMIEEAQVLGAEPQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC LRIDAVKTLQQRWQHEAQSVPIERKQEQKLWDAFRKPIDDAFQRKTAEREKAAAALGEFD HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH RMVLEASKAVEAATASGDAQKIHAAAKALEAIVRGQVPVPAPAPVPAPAATSESEVPSAA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH SVEAVLAAANETPVAAGDDAEASVESTQEATETVADQSPVMEAASEAAATEFAQAGEPAS HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC APAEPPPPPKAAPRPIVAMRGDDRPGMRKAEAAPAGRGGKFGDRKDSRPGGPRQSTDNKF CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPYRPDRDGSRSGRDDRGPRDNDRPAFEDRGPRLGDAAFRAQREAFEAANHALKKLAMQA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HGEVLTHLITAWEKRDPSLLPGAQELGKQVAPAVRNRWVQAVGVPSGKDASEALLRLEIA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AELPTPAEHLSARRMLQLQLLTRRNAPAPAETWGEDAAQVLAADFDAGNARRVQNVLKVL HCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LKR HCC >Mature Secondary Structure MLRFPMSKSSKADATPAHASTVKTGPAKSAEAHPLDGLTGGAFSAPTSGERAARIRQWLA CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC TEPTAEQMAEVYKDLANRDKGAAKPLKEKLDEVKRSKGQEAVAAEWAEKAQGLLALPKLN CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEECCCCC LADALAWQRDAAKAGAPLSREPLAGLKVQLAERVKTIEDLQHRTQVQREAAVLIAQRIEV HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSIKPWRDAQAALDTLRTDVTHWQNQADEIMHDANWASVDAKFPPLLDASRGQLLAVWEA HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH FQGALAVAVKAAEDAAAPLPAVPVWADELRAARGVPAPAGEQPARAPKAKIDPAVLKDMR HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH EKATAAVQEALARLEHEVTEGHGKSTPKVAADLRHALKEHIRHIDSKLEAAAHAALTAAG HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELEGWQRWRADQIREELVVKAEALVAHPMGGRKQQEALRAMREQWKTSDQGGTPNHALWK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH RFDDACNEAHKVVETWLEKVKEQTEASKAQRHALIEEVLAWAEAHKTNTDWKHHIRSLNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FVEKWREAGHLGEKAFAEIQPVWKAAMDAADAPLTAARNESLARRKAMIEEAQVLGAEPQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC LRIDAVKTLQQRWQHEAQSVPIERKQEQKLWDAFRKPIDDAFQRKTAEREKAAAALGEFD HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH RMVLEASKAVEAATASGDAQKIHAAAKALEAIVRGQVPVPAPAPVPAPAATSESEVPSAA HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH SVEAVLAAANETPVAAGDDAEASVESTQEATETVADQSPVMEAASEAAATEFAQAGEPAS HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC APAEPPPPPKAAPRPIVAMRGDDRPGMRKAEAAPAGRGGKFGDRKDSRPGGPRQSTDNKF CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPYRPDRDGSRSGRDDRGPRDNDRPAFEDRGPRLGDAAFRAQREAFEAANHALKKLAMQA CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH HGEVLTHLITAWEKRDPSLLPGAQELGKQVAPAVRNRWVQAVGVPSGKDASEALLRLEIA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AELPTPAEHLSARRMLQLQLLTRRNAPAPAETWGEDAAQVLAADFDAGNARRVQNVLKVL HCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LKR HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA