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The map label for this gene is yfjP [H]

Identifier: 91788725

GI number: 91788725

Start: 3019506

End: 3020201

Strand: Reverse

Name: yfjP [H]

Synonym: Bpro_2864

Alternate gene names: 91788725

Gene position: 3020201-3019506 (Counterclockwise)

Preceding gene: 91788726

Following gene: 91788724

Centisome position: 58.08

GC content: 59.91

Gene sequence:

>696_bases
ATGAAAAAGATAGTAAAAACCGGCCCTGCCAGTGTTGAGCTGGCCGATGTTCCCGAGCCCGCCACCACGGTGCCCGAGTA
TTGGGGCGACGCCTGCAGGCACCTGGTCAAGAAAGACCGGGTGATGAAGCGGCTGATTCCCCAGTTTGGCGACGCCTGTC
TTCATGCAAGGGGGGATGCCTTCAGCACGCTGGCGCGCAGCATCGTGGGGCAGCAGATCTCCGTGAAAGCGGCCCAGAGC
GTCTGGACAAAGTTCTCGGCCCTGCCCAAGAAAATCACTCCCGCCAACGTGCTCAGGCTCAAGGTTAACGACATGCGGGC
TGCGGGCCTGAGTGCGCGCAAGGTGGAGTACCTGGTAGACCTGTCGATACACTTCGACACCGGCACGGTCCATGTGAAGG
ACTGGCAGGCGATGGACGACGAAGCCATCATTGCCGAGCTGGTGGCCATCCGCGGCATTGGCCGCTGGACCGCCGAGATG
TTCCTGATTTTTTACCTGATGCGTCCCAACGTGCTGCCGCTGGACGATCTCGGCCTGATCAACGGCATCAGCCAGAACTA
TTTTTCGGGTGAATCCGTCAGCCGCAGTGATGCGCGCGAGGTGGCTGCGGCCTGGGCGCCGTATTGCAGTGTCGCAACTT
GGTATATTTGGCGCTCGCTGGACCCATTACCGGTTCTGGGTACCGAGCAAAAATAA

Upstream 100 bases:

>100_bases
TCACCGGCAGGCACCACCTGGGAAGTGCAATCGTGAGGTTGGGGCTTAAATATTCAGATCATTCTGGCCACCAGTTGCTG
CAGCGCGGGTGCGGGCAGTT

Downstream 100 bases:

>100_bases
CGGTAACAGGCCTTAAGTTTTAAGAAGCCTTGAGGAGCATGACATGGCGAAAAAGACCTTTCTCGATTTTGAGCAGCCCA
TTGCGGAGCTTGAAGGGAAA

Product: HhH-GPD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKKIVKTGPASVELADVPEPATTVPEYWGDACRHLVKKDRVMKRLIPQFGDACLHARGDAFSTLARSIVGQQISVKAAQS
VWTKFSALPKKITPANVLRLKVNDMRAAGLSARKVEYLVDLSIHFDTGTVHVKDWQAMDDEAIIAELVAIRGIGRWTAEM
FLIFYLMRPNVLPLDDLGLINGISQNYFSGESVSRSDAREVAAAWAPYCSVATWYIWRSLDPLPVLGTEQK

Sequences:

>Translated_231_residues
MKKIVKTGPASVELADVPEPATTVPEYWGDACRHLVKKDRVMKRLIPQFGDACLHARGDAFSTLARSIVGQQISVKAAQS
VWTKFSALPKKITPANVLRLKVNDMRAAGLSARKVEYLVDLSIHFDTGTVHVKDWQAMDDEAIIAELVAIRGIGRWTAEM
FLIFYLMRPNVLPLDDLGLINGISQNYFSGESVSRSDAREVAAAWAPYCSVATWYIWRSLDPLPVLGTEQK
>Mature_231_residues
MKKIVKTGPASVELADVPEPATTVPEYWGDACRHLVKKDRVMKRLIPQFGDACLHARGDAFSTLARSIVGQQISVKAAQS
VWTKFSALPKKITPANVLRLKVNDMRAAGLSARKVEYLVDLSIHFDTGTVHVKDWQAMDDEAIIAELVAIRGIGRWTAEM
FLIFYLMRPNVLPLDDLGLINGISQNYFSGESVSRSDAREVAAAWAPYCSVATWYIWRSLDPLPVLGTEQK

Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine, 3-methylguanine, 7-methylguanine, O2- methylthymine, and O2-methylcytosine from the damaged DNA polymer formed by alkylation lesions [H]

COG id: COG0122

COG function: function code L; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alkylbase DNA glycosidase alkA family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320990, Length=240, Percent_Identity=26.6666666666667, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR003265
- InterPro:   IPR003583
- InterPro:   IPR023170 [H]

Pfam domain/function: PF00730 HhH-GPD [H]

EC number: =3.2.2.21 [H]

Molecular weight: Translated: 25658; Mature: 25658

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIVKTGPASVELADVPEPATTVPEYWGDACRHLVKKDRVMKRLIPQFGDACLHARGDA
CCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FSTLARSIVGQQISVKAAQSVWTKFSALPKKITPANVLRLKVNDMRAAGLSARKVEYLVD
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCCCCHHHEEEEEE
LSIHFDTGTVHVKDWQAMDDEAIIAELVAIRGIGRWTAEMFLIFYLMRPNVLPLDDLGLI
EEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHH
NGISQNYFSGESVSRSDAREVAAAWAPYCSVATWYIWRSLDPLPVLGTEQK
HCCHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKKIVKTGPASVELADVPEPATTVPEYWGDACRHLVKKDRVMKRLIPQFGDACLHARGDA
CCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FSTLARSIVGQQISVKAAQSVWTKFSALPKKITPANVLRLKVNDMRAAGLSARKVEYLVD
HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCCCCHHHEEEEEE
LSIHFDTGTVHVKDWQAMDDEAIIAELVAIRGIGRWTAEMFLIFYLMRPNVLPLDDLGLI
EEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHH
NGISQNYFSGESVSRSDAREVAAAWAPYCSVATWYIWRSLDPLPVLGTEQK
HCCHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]