Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is nhaA1 [H]
Identifier: 91788225
GI number: 91788225
Start: 2453767
End: 2454306
Strand: Direct
Name: nhaA1 [H]
Synonym: Bpro_2358
Alternate gene names: 91788225
Gene position: 2453767-2454306 (Clockwise)
Preceding gene: 91788224
Following gene: 91788227
Centisome position: 47.19
GC content: 60.19
Gene sequence:
>540_bases ATGAAAACCCGGGACTCGCTGCTAGCCCCTGACGGGGCAACCGATCACATCCGTGGCCAGTCGTTCGCCGCTGTCACGGT GATTGAGTATGGCGATTTTGAATGCGCGCTATGCCTGCAGGCCTACGCGGGGCTGAAGGTGATGCTTCCGCATTTCGGAC AGCAGTTGCGCTTTGTATTTCGCCACTTCCCGCTGCGGGAAATGCATCCGCACGCCGAACTGGCCGCGGAAGCGGCGGAA GCGGCCGGCGCCCAGGGCAAGTTCTGGCCCATGTACGAACTGCTTTTCACGCACCAGCAACACCTGACGGAAAAGCACCT GCTCGACTATGCCGAGCAGGTGGGCCTGGACATGCCGCGGTACCGGAACGAAATGAGAGACCATGTCTACCTGCAGCGCG TGCAGGAGCACATACTGGGCGCAAGACACCTGGACATACGCTCGACCCCCGCCTTTTATGTCAATGGCGTGGTCACTGAT GTTTCATTTGGCCTGCAGCACCTGCACGAGGCAATTGACAAGGTGCTGCTGGCCGCCTGA
Upstream 100 bases:
>100_bases GCCGGCTGAGCCCCGCATTGATGCATTGATCATGGGGCTGCCCCTGGCGCATACTGCCTGAAAAATGCACAGATAAAGGC GCACGTAAAAGGTGACTGCC
Downstream 100 bases:
>100_bases CGCTCTTCGCAGCTCAGAGAGCAGGCGCCACCAGTGCGCCGGCCAGCGCGGCATTCCTGCTGTGCAAACGTCGTGCCTGC AGTGTCGCGCCAATGAAGAA
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: Sodium/proton antiporter nhaA 1 [H]
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MKTRDSLLAPDGATDHIRGQSFAAVTVIEYGDFECALCLQAYAGLKVMLPHFGQQLRFVFRHFPLREMHPHAELAAEAAE AAGAQGKFWPMYELLFTHQQHLTEKHLLDYAEQVGLDMPRYRNEMRDHVYLQRVQEHILGARHLDIRSTPAFYVNGVVTD VSFGLQHLHEAIDKVLLAA
Sequences:
>Translated_179_residues MKTRDSLLAPDGATDHIRGQSFAAVTVIEYGDFECALCLQAYAGLKVMLPHFGQQLRFVFRHFPLREMHPHAELAAEAAE AAGAQGKFWPMYELLFTHQQHLTEKHLLDYAEQVGLDMPRYRNEMRDHVYLQRVQEHILGARHLDIRSTPAFYVNGVVTD VSFGLQHLHEAIDKVLLAA >Mature_179_residues MKTRDSLLAPDGATDHIRGQSFAAVTVIEYGDFECALCLQAYAGLKVMLPHFGQQLRFVFRHFPLREMHPHAELAAEAAE AAGAQGKFWPMYELLFTHQQHLTEKHLLDYAEQVGLDMPRYRNEMRDHVYLQRVQEHILGARHLDIRSTPAFYVNGVVTD VSFGLQHLHEAIDKVLLAA
Specific function: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR023171 - InterPro: IPR004670 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA; PF06965 Na_H_antiport_1 [H]
EC number: NA
Molecular weight: Translated: 20393; Mature: 20393
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRDSLLAPDGATDHIRGQSFAAVTVIEYGDFECALCLQAYAGLKVMLPHFGQQLRFVF CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH RHFPLREMHPHAELAAEAAEAAGAQGKFWPMYELLFTHQQHLTEKHLLDYAEQVGLDMPR HHCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH YRNEMRDHVYLQRVQEHILGARHLDIRSTPAFYVNGVVTDVSFGLQHLHEAIDKVLLAA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTRDSLLAPDGATDHIRGQSFAAVTVIEYGDFECALCLQAYAGLKVMLPHFGQQLRFVF CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH RHFPLREMHPHAELAAEAAEAAGAQGKFWPMYELLFTHQQHLTEKHLLDYAEQVGLDMPR HHCCHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH YRNEMRDHVYLQRVQEHILGARHLDIRSTPAFYVNGVVTDVSFGLQHLHEAIDKVLLAA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA