Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is phoU [H]
Identifier: 91788127
GI number: 91788127
Start: 2343059
End: 2343760
Strand: Direct
Name: phoU [H]
Synonym: Bpro_2256
Alternate gene names: 91788127
Gene position: 2343059-2343760 (Clockwise)
Preceding gene: 91788126
Following gene: 91788128
Centisome position: 45.06
GC content: 58.26
Gene sequence:
>702_bases ATGCCTGATAAACACCTCTCGACCCAGTTTGACAGCGAACTCAACGGCGTGTCCTCGCGTGTGATGGAGCTCGGCGGCCT GGTTGAATCCCAGATCCGTCTGGCCATCTATGCGTTGTCGCAATTCAGCACCGAGAGCGCCAACCAGGTGATAGAGACTG AGGCGCGTGTCAACGCGATGGAAATCGACATTGACCGCGAGCTGTCTTCCATCATTGCCCGCCGCCAGCCTACTGCCCGC GATTTGCGCCTGCTGATCGCCATTTCAAAGACCACGGCCAACCTGGAGCGTGCCGGCGATGAAGCCGAAAAAATCGCGCG CATGGTCAATTCGATCATCAACAGCGGTTCGGCACGCGTCCTGCCGTCGTCCGATCTTCGCGTTGCCGCAGAACTGGCTT CCGGCTTGCTGCGCAAGGCGCTGGACGCCTTCGCCCGGCTGGATACCGCTGCGGCGGTATCCATCCTCAAGGAGGACGAC CTGATTGACCAGGAGTTTGACGGTTTTGTGCGCAAGCTGATCACCTACATGATGGAAGATCCACGCACCATTTCAGCCAG CCTGGACTTGCTGTTTGTCGCCAAGGCCATCGAGCGTGTGGGCGACCACGCCAAGAATATCGCCGAGTTCATCATCTATA TCGTCAAAGGCGCGGATGTCAGGCATACCTCCATGGACCAGATCGAGTCCGCCGTCAAGTAA
Upstream 100 bases:
>100_bases GCCCGGCGAAGCCGGTTCCGCGACGCCCGCTGGCTCGGCACTGAGCGTCTCATGCGTTGCGGCTCCGATTGCAGCGGCAA ATAAACCCAAAGGGAACAAC
Downstream 100 bases:
>100_bases GGCCGCATGAAACACCAAGCCCGCATACTGATTGTTGAAGACGAGCCAGCGATTGCCGAACTGATTGCGGTCAACTTGAG GCATGGTGGGTTTGAGCCCG
Product: phosphate uptake regulator PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MPDKHLSTQFDSELNGVSSRVMELGGLVESQIRLAIYALSQFSTESANQVIETEARVNAMEIDIDRELSSIIARRQPTAR DLRLLIAISKTTANLERAGDEAEKIARMVNSIINSGSARVLPSSDLRVAAELASGLLRKALDAFARLDTAAAVSILKEDD LIDQEFDGFVRKLITYMMEDPRTISASLDLLFVAKAIERVGDHAKNIAEFIIYIVKGADVRHTSMDQIESAVK
Sequences:
>Translated_233_residues MPDKHLSTQFDSELNGVSSRVMELGGLVESQIRLAIYALSQFSTESANQVIETEARVNAMEIDIDRELSSIIARRQPTAR DLRLLIAISKTTANLERAGDEAEKIARMVNSIINSGSARVLPSSDLRVAAELASGLLRKALDAFARLDTAAAVSILKEDD LIDQEFDGFVRKLITYMMEDPRTISASLDLLFVAKAIERVGDHAKNIAEFIIYIVKGADVRHTSMDQIESAVK >Mature_232_residues PDKHLSTQFDSELNGVSSRVMELGGLVESQIRLAIYALSQFSTESANQVIETEARVNAMEIDIDRELSSIIARRQPTARD LRLLIAISKTTANLERAGDEAEKIARMVNSIINSGSARVLPSSDLRVAAELASGLLRKALDAFARLDTAAAVSILKEDDL IDQEFDGFVRKLITYMMEDPRTISASLDLLFVAKAIERVGDHAKNIAEFIIYIVKGADVRHTSMDQIESAVK
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=227, Percent_Identity=47.136563876652, Blast_Score=204, Evalue=3e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 25635; Mature: 25503
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDKHLSTQFDSELNGVSSRVMELGGLVESQIRLAIYALSQFSTESANQVIETEARVNAM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCE EIDIDRELSSIIARRQPTARDLRLLIAISKTTANLERAGDEAEKIARMVNSIINSGSARV EECHHHHHHHHHHHCCCCHHHHHHHEEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEE LPSSDLRVAAELASGLLRKALDAFARLDTAAAVSILKEDDLIDQEFDGFVRKLITYMMED CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC PRTISASLDLLFVAKAIERVGDHAKNIAEFIIYIVKGADVRHTSMDQIESAVK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC >Mature Secondary Structure PDKHLSTQFDSELNGVSSRVMELGGLVESQIRLAIYALSQFSTESANQVIETEARVNAM CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCE EIDIDRELSSIIARRQPTARDLRLLIAISKTTANLERAGDEAEKIARMVNSIINSGSARV EECHHHHHHHHHHHCCCCHHHHHHHEEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEE LPSSDLRVAAELASGLLRKALDAFARLDTAAAVSILKEDDLIDQEFDGFVRKLITYMMED CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC PRTISASLDLLFVAKAIERVGDHAKNIAEFIIYIVKGADVRHTSMDQIESAVK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10383982 [H]