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The map label for this gene is yfdZ [H]

Identifier: 91787305

GI number: 91787305

Start: 1450573

End: 1451784

Strand: Direct

Name: yfdZ [H]

Synonym: Bpro_1410

Alternate gene names: 91787305

Gene position: 1450573-1451784 (Clockwise)

Preceding gene: 91787304

Following gene: 91787312

Centisome position: 27.89

GC content: 64.19

Gene sequence:

>1212_bases
ATGTCCGCTTCCTCTTCAGGCAAGCGCCGCTTTGCGCGCATTGATCGACTTCCTCCCTACGTCTTCAACATCACGGCCGA
GCTCAAGCTCGCGGCGCGCCGGCGCGGTGAAGACATCATCGACATGAGCATGGGCAACCCAGATGGCGCCACCCCGGCGC
ACATCGTCGCCAAGCTCACCGAGGTTGCGCAGCGGCCCGACACGCACGGCTACTCGGCCAGCAAGGGCATCCCGCGCCTG
CGCCGCGCCATCGCGCACTGGTACCAGAGCCGCTACCAGGTGGCGATAGACCCCGACACCGAGGCCATCGTCACCATCGG
CTCCAAGGAAGGCCTGGCGCACCTGATGCTGGCCACGCTGGACCGTGGCGACACCGTGCTGGTGCCGGATCCGAGCTATC
CGATCCACATCTACGGCGCGGTGATCGCTGGGGCCGACATCCGCTCCGTGCCGCTGACGCCCGACACGGATTTTTTTGCC
GAGCTGGAGAAGGCGATTCGCGGCAGCTACCCCAAACCCAAGATGATGGTGCTGGGTTTTCCGTCCAACCCGACGGCCCA
GTGCGTGGAGCTGGAGTTCTTCGAGAAGGTGATTGCGCTGGCGCGCAAGCACGACATTTTTGTGGTGCACGATCTGGCCT
ATGCCGACATTGTGTTCGACGGCTGGAAGGCACCGTCCATCATGCAGGTGCCGGGTGCCAAGGACATTGCGGTCGAGTTC
TTCACGCTGTCCAAGAGCTACAACATGGCGGGCTGGCGCGTGGGCTTCATGGTGGGCAACCCCGACCTGGTGGCCGCGCT
GGCCCGCATCAAGAGCTACCACGACTACGGCACCTTCACCCCGCTGCAGGTGGCAGCCATCGCCGCGCTGGAAGGCGACC
AGAGTTGCGTGAAAGAGATCGCCGCGCAGTACCAGAGCCGGCGCGATGTGCTGTACAAGGGTTTGATCGAAGCGGGTTGG
CAGGTGGACTGCCCCAAGGCCTCGATGTACATCTGGGCCCGCATCCCCGAGGCCTATCGCAAGCTCGGTTCGCTGGAGTT
TGCCAAACAGCTGCTTGAAAAAGCCAGGGTGTGCGTGTCGCCCGGCATCGGCTTTGGCGACCATGGCGACGACCATGTGC
GCTTTGCGCTGATCGAAAACGAGGCCCGCATCCGCCAGGCCGTGCGCGGCATCAAGGCCATGTTCAAGGCCGACGGGCTG
GTCAGGCCCTAG

Upstream 100 bases:

>100_bases
TCAGTTGACAGGCATCGCCGTCGGTTACGATGGCGGTGGGCCGGCCTCATTGCCGGCCACGTCGCTCGGACGGTTCCGGG
CGCTTACGTGAAAGTTTTTT

Downstream 100 bases:

>100_bases
CCTGAAGTTTCCCCGGGCTCGGAGCGCGTTTTCCCTTGCAAGACATCTGTCTGCAGGGGAAGTTACTGGATCAGCTCAAG
GGCGCGCTGGTGTTTTGCGA

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MSASSSGKRRFARIDRLPPYVFNITAELKLAARRRGEDIIDMSMGNPDGATPAHIVAKLTEVAQRPDTHGYSASKGIPRL
RRAIAHWYQSRYQVAIDPDTEAIVTIGSKEGLAHLMLATLDRGDTVLVPDPSYPIHIYGAVIAGADIRSVPLTPDTDFFA
ELEKAIRGSYPKPKMMVLGFPSNPTAQCVELEFFEKVIALARKHDIFVVHDLAYADIVFDGWKAPSIMQVPGAKDIAVEF
FTLSKSYNMAGWRVGFMVGNPDLVAALARIKSYHDYGTFTPLQVAAIAALEGDQSCVKEIAAQYQSRRDVLYKGLIEAGW
QVDCPKASMYIWARIPEAYRKLGSLEFAKQLLEKARVCVSPGIGFGDHGDDHVRFALIENEARIRQAVRGIKAMFKADGL
VRP

Sequences:

>Translated_403_residues
MSASSSGKRRFARIDRLPPYVFNITAELKLAARRRGEDIIDMSMGNPDGATPAHIVAKLTEVAQRPDTHGYSASKGIPRL
RRAIAHWYQSRYQVAIDPDTEAIVTIGSKEGLAHLMLATLDRGDTVLVPDPSYPIHIYGAVIAGADIRSVPLTPDTDFFA
ELEKAIRGSYPKPKMMVLGFPSNPTAQCVELEFFEKVIALARKHDIFVVHDLAYADIVFDGWKAPSIMQVPGAKDIAVEF
FTLSKSYNMAGWRVGFMVGNPDLVAALARIKSYHDYGTFTPLQVAAIAALEGDQSCVKEIAAQYQSRRDVLYKGLIEAGW
QVDCPKASMYIWARIPEAYRKLGSLEFAKQLLEKARVCVSPGIGFGDHGDDHVRFALIENEARIRQAVRGIKAMFKADGL
VRP
>Mature_402_residues
SASSSGKRRFARIDRLPPYVFNITAELKLAARRRGEDIIDMSMGNPDGATPAHIVAKLTEVAQRPDTHGYSASKGIPRLR
RAIAHWYQSRYQVAIDPDTEAIVTIGSKEGLAHLMLATLDRGDTVLVPDPSYPIHIYGAVIAGADIRSVPLTPDTDFFAE
LEKAIRGSYPKPKMMVLGFPSNPTAQCVELEFFEKVIALARKHDIFVVHDLAYADIVFDGWKAPSIMQVPGAKDIAVEFF
TLSKSYNMAGWRVGFMVGNPDLVAALARIKSYHDYGTFTPLQVAAIAALEGDQSCVKEIAAQYQSRRDVLYKGLIEAGWQ
VDCPKASMYIWARIPEAYRKLGSLEFAKQLLEKARVCVSPGIGFGDHGDDHVRFALIENEARIRQAVRGIKAMFKADGLV
RP

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI56713254, Length=423, Percent_Identity=23.4042553191489, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI56713256, Length=414, Percent_Identity=22.9468599033816, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI95147551, Length=413, Percent_Identity=23.728813559322, Blast_Score=108, Evalue=8e-24,
Organism=Homo sapiens, GI169881279, Length=413, Percent_Identity=23.728813559322, Blast_Score=108, Evalue=8e-24,
Organism=Homo sapiens, GI169881281, Length=239, Percent_Identity=23.4309623430962, Blast_Score=80, Evalue=4e-15,
Organism=Escherichia coli, GI1788722, Length=399, Percent_Identity=81.453634085213, Blast_Score=690, Evalue=0.0,
Organism=Escherichia coli, GI1786816, Length=369, Percent_Identity=24.6612466124661, Blast_Score=116, Evalue=3e-27,
Organism=Escherichia coli, GI1788627, Length=367, Percent_Identity=25.8855585831063, Blast_Score=101, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71994472, Length=328, Percent_Identity=26.219512195122, Blast_Score=114, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI71994476, Length=328, Percent_Identity=26.219512195122, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17567369, Length=415, Percent_Identity=22.8915662650602, Blast_Score=108, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6322401, Length=393, Percent_Identity=20.1017811704835, Blast_Score=93, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6320317, Length=349, Percent_Identity=23.7822349570201, Blast_Score=82, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28573069, Length=385, Percent_Identity=24.1558441558442, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24646114, Length=385, Percent_Identity=24.1558441558442, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI28573067, Length=385, Percent_Identity=24.1558441558442, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI28573065, Length=385, Percent_Identity=24.1558441558442, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI45551451, Length=364, Percent_Identity=25.5494505494505, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24641770, Length=364, Percent_Identity=25.5494505494505, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24641760, Length=364, Percent_Identity=25.5494505494505, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24641768, Length=364, Percent_Identity=25.5494505494505, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24641766, Length=364, Percent_Identity=25.5494505494505, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24641764, Length=364, Percent_Identity=25.5494505494505, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI18859735, Length=201, Percent_Identity=25.8706467661692, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.- [C]

Molecular weight: Translated: 44524; Mature: 44393

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASSSGKRRFARIDRLPPYVFNITAELKLAARRRGEDIIDMSMGNPDGATPAHIVAKLT
CCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH
EVAQRPDTHGYSASKGIPRLRRAIAHWYQSRYQVAIDPDTEAIVTIGSKEGLAHLMLATL
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCCHHHHHHHHC
DRGDTVLVPDPSYPIHIYGAVIAGADIRSVPLTPDTDFFAELEKAIRGSYPKPKMMVLGF
CCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEC
PSNPTAQCVELEFFEKVIALARKHDIFVVHDLAYADIVFDGWKAPSIMQVPGAKDIAVEF
CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCEEHEEECCCCCCCEEECCCCCCEEEEE
FTLSKSYNMAGWRVGFMVGNPDLVAALARIKSYHDYGTFTPLQVAAIAALEGDQSCVKEI
EEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHH
AAQYQSRRDVLYKGLIEAGWQVDCPKASMYIWARIPEAYRKLGSLEFAKQLLEKARVCVS
HHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEECHHHHHHHCCHHHHHHHHHHHHHEEC
PGIGFGDHGDDHVRFALIENEARIRQAVRGIKAMFKADGLVRP
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SASSSGKRRFARIDRLPPYVFNITAELKLAARRRGEDIIDMSMGNPDGATPAHIVAKLT
CCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHH
EVAQRPDTHGYSASKGIPRLRRAIAHWYQSRYQVAIDPDTEAIVTIGSKEGLAHLMLATL
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCCCHHHHHHHHC
DRGDTVLVPDPSYPIHIYGAVIAGADIRSVPLTPDTDFFAELEKAIRGSYPKPKMMVLGF
CCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEC
PSNPTAQCVELEFFEKVIALARKHDIFVVHDLAYADIVFDGWKAPSIMQVPGAKDIAVEF
CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCEEHEEECCCCCCCEEECCCCCCEEEEE
FTLSKSYNMAGWRVGFMVGNPDLVAALARIKSYHDYGTFTPLQVAAIAALEGDQSCVKEI
EEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHH
AAQYQSRRDVLYKGLIEAGWQVDCPKASMYIWARIPEAYRKLGSLEFAKQLLEKARVCVS
HHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEECHHHHHHHCCHHHHHHHHHHHHHEEC
PGIGFGDHGDDHVRFALIENEARIRQAVRGIKAMFKADGLVRP
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]