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The map label for this gene is yjdC [C]

Identifier: 91787300

GI number: 91787300

Start: 1442884

End: 1443495

Strand: Direct

Name: yjdC [C]

Synonym: Bpro_1405

Alternate gene names: 91787300

Gene position: 1442884-1443495 (Clockwise)

Preceding gene: 91787297

Following gene: 91787301

Centisome position: 27.75

GC content: 62.91

Gene sequence:

>612_bases
ATGAAAAAGCGTACGGCGGAGACCAGCAAAGTGAGTGATGAGCAGGGTGTCCTGAGCGTGCGGGAACGCCTCCTTGAGAC
CGCGGCGAGGCTGTTCTACCAGGAAGGCGTCAGAGCCGTCGGCGTCGATCTTGTGGTCGAACGATCCGGCGTCGCCAAGA
CCAGCCTCTACCGCCACTTCGCCACCAAGGACGATCTCGTGGTTGCATTTCTCGAGCGCGAGGACGCCGAGTATTGGAGT
GACTGGGAAAGTGCTGCGGCGCAAGGCAAGGATGATGCCGAAGCGGAACTTCAGGCGCTTCTGCGCTGGATCGCCGAGCA
TATCGCCGGGCCGAAGTACCGCGGCTGCCCGTTTCTCAATGTGGCGACCGAGTTCCCGGCCCCAGCCCATCCCGCCCGCG
CAGTCGCCAGAAGGAACAAGGTGGAGCTGCATCGCCGTCTCGGCGTGCTGGCCAGGAAATTGGGGGCTCGCAAGCCTGAC
GAGCTGGCCGACCAGCTTGTGCTTCTCATCGATGGTGCCTATATGAACGGTCCGCTTCTCGGCAAGAAGGGGCCGGCGCA
CTCGTTCGTGGCGGCGGGACTGGCTTTGATCCTTGCTGCTCAACGTCGCTGA

Upstream 100 bases:

>100_bases
TCGATGGAGAGCCATCTGCCGCAAGACGCTACAGATCTGTACTCTTTTAATGAGTGTAGAGTACAGATCTGTAGCGTGTC
AAGGGTATAGAGGAAATGCA

Downstream 100 bases:

>100_bases
TGTTCGAGGCAACGACCGAATACTAGAAACTGTTTAACAGCACACTTGGGGAGGGCACTGGGGGGCGATCCGGGGGAGAT
AAAGCGAAAGCATGTCGTCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; TetR Family Regulatory Protein; Regulatory Protein; Transcriptional Regulatory Protein; Transcriptional Regulator Tetr Family; Transcriptional Regulator Protein; Methionine And Cysteine Biosynthesis Regulator; Tetr Family Transcriptional Regulator; TetR-Type Transcriptional Regulator Of Sulfur Metabolism; Transcriptional Regulator TetR/AcrR-Family; Transcription Regulator Protein; Transcription Regulator TetR; Transcription Regulator; TetR-Family Protein Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator Tetr-Like Protein; Transcriptional Repressor

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKKRTAETSKVSDEQGVLSVRERLLETAARLFYQEGVRAVGVDLVVERSGVAKTSLYRHFATKDDLVVAFLEREDAEYWS
DWESAAAQGKDDAEAELQALLRWIAEHIAGPKYRGCPFLNVATEFPAPAHPARAVARRNKVELHRRLGVLARKLGARKPD
ELADQLVLLIDGAYMNGPLLGKKGPAHSFVAAGLALILAAQRR

Sequences:

>Translated_203_residues
MKKRTAETSKVSDEQGVLSVRERLLETAARLFYQEGVRAVGVDLVVERSGVAKTSLYRHFATKDDLVVAFLEREDAEYWS
DWESAAAQGKDDAEAELQALLRWIAEHIAGPKYRGCPFLNVATEFPAPAHPARAVARRNKVELHRRLGVLARKLGARKPD
ELADQLVLLIDGAYMNGPLLGKKGPAHSFVAAGLALILAAQRR
>Mature_203_residues
MKKRTAETSKVSDEQGVLSVRERLLETAARLFYQEGVRAVGVDLVVERSGVAKTSLYRHFATKDDLVVAFLEREDAEYWS
DWESAAAQGKDDAEAELQALLRWIAEHIAGPKYRGCPFLNVATEFPAPAHPARAVARRNKVELHRRLGVLARKLGARKPD
ELADQLVLLIDGAYMNGPLLGKKGPAHSFVAAGLALILAAQRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22396; Mature: 22396

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRTAETSKVSDEQGVLSVRERLLETAARLFYQEGVRAVGVDLVVERSGVAKTSLYRHF
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEEECCCCHHHHHHHHH
ATKDDLVVAFLEREDAEYWSDWESAAAQGKDDAEAELQALLRWIAEHIAGPKYRGCPFLN
CCCCCCEEHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEE
VATEFPAPAHPARAVARRNKVELHRRLGVLARKLGARKPDELADQLVLLIDGAYMNGPLL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC
GKKGPAHSFVAAGLALILAAQRR
CCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKRTAETSKVSDEQGVLSVRERLLETAARLFYQEGVRAVGVDLVVERSGVAKTSLYRHF
CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEEECCCCHHHHHHHHH
ATKDDLVVAFLEREDAEYWSDWESAAAQGKDDAEAELQALLRWIAEHIAGPKYRGCPFLN
CCCCCCEEHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEE
VATEFPAPAHPARAVARRNKVELHRRLGVLARKLGARKPDELADQLVLLIDGAYMNGPLL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC
GKKGPAHSFVAAGLALILAAQRR
CCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA