Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is allA [H]
Identifier: 91787297
GI number: 91787297
Start: 1439590
End: 1440105
Strand: Direct
Name: allA [H]
Synonym: Bpro_1402
Alternate gene names: 91787297
Gene position: 1439590-1440105 (Clockwise)
Preceding gene: 91787292
Following gene: 91787300
Centisome position: 27.68
GC content: 62.6
Gene sequence:
>516_bases ATGTCAACCCGTCGCCACGTCATGCCCATCGAACCTCTCAGCGCGGGAGCGTTTCGCCGCTACGGCGATGTCATTGAGGC CAGTGATTCGGCCGAGCAGTTCACGGTCAACCAGGGCAACGCGACGCGGTACCACGATCTGGCAACGGTGGACGTGGCTG CCGAGCATGGCCATCCGGTCATTAGCATTTTCCGCGCGCAGCCATGCAACTTGCCCCTGCGTCTGCGGCTGCTCGAGCGC CACCCGATCGGCAGCCAAGCGTTCATTCCGATGGGAAACCACCCCTATCTGGTGATTGTGGCCGCGGCCGACACGCCGCT GGGCGCACAGCACATCCACTGCTTTCGGGCGTCCCCTGGCCAAGGTGTCAATTTTGCACGCGGGACATGGCATCCCCCGG TGCTGCCCCTGCACTCGGTTTGCGATTTTCTCGTGATCGACCGGGGTGGGCCGTCGAAGCTCCCCAATTGCGAGGAACTC GCGCTGGATGAATTGGAACTGTGGATCGAAGCTTGA
Upstream 100 bases:
>100_bases CCTTATGCTGTGCAGAACAACAGTTGCTAATTATCTGCATGTATCTGCATGTCGCTCGTCCCTTTCGATCTCGCCACCCC CACCTCTGAAGGTCGCCACC
Downstream 100 bases:
>100_bases GCGGAACGCCAGCACACCAAGGGTTCTCTTGGGGAATGCGTCCAGCCGATCGAGCAGTGCGCGCCTGCGGACCATGAGAC CGATGCGATCAGAGATACCA
Product: ureidoglycolate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSTRRHVMPIEPLSAGAFRRYGDVIEASDSAEQFTVNQGNATRYHDLATVDVAAEHGHPVISIFRAQPCNLPLRLRLLER HPIGSQAFIPMGNHPYLVIVAAADTPLGAQHIHCFRASPGQGVNFARGTWHPPVLPLHSVCDFLVIDRGGPSKLPNCEEL ALDELELWIEA
Sequences:
>Translated_171_residues MSTRRHVMPIEPLSAGAFRRYGDVIEASDSAEQFTVNQGNATRYHDLATVDVAAEHGHPVISIFRAQPCNLPLRLRLLER HPIGSQAFIPMGNHPYLVIVAAADTPLGAQHIHCFRASPGQGVNFARGTWHPPVLPLHSVCDFLVIDRGGPSKLPNCEEL ALDELELWIEA >Mature_170_residues STRRHVMPIEPLSAGAFRRYGDVIEASDSAEQFTVNQGNATRYHDLATVDVAAEHGHPVISIFRAQPCNLPLRLRLLERH PIGSQAFIPMGNHPYLVIVAAADTPLGAQHIHCFRASPGQGVNFARGTWHPPVLPLHSVCDFLVIDRGGPSKLPNCEELA LDELELWIEA
Specific function: Involved In The Anaerobic Utilization Of Allantoin. Reinforces The Induction Of Genes Involved In The Degradation Of Allantoin And Glyoxylate By Producing Glyoxylate. [C]
COG id: COG3194
COG function: function code F; Ureidoglycolate hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureidoglycolate hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786714, Length=160, Percent_Identity=45, Blast_Score=130, Evalue=6e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR007247 [H]
Pfam domain/function: PF04115 Ureidogly_hydro [H]
EC number: =3.5.3.19 [H]
Molecular weight: Translated: 18812; Mature: 18680
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRRHVMPIEPLSAGAFRRYGDVIEASDSAEQFTVNQGNATRYHDLATVDVAAEHGHPV CCCCCCCCCCCCCCCCHHHHHCCEEECCCCCCEEEEECCCCCEEECEEEEEEECCCCCEE ISIFRAQPCNLPLRLRLLERHPIGSQAFIPMGNHPYLVIVAAADTPLGAQHIHCFRASPG EEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCC QGVNFARGTWHPPVLPLHSVCDFLVIDRGGPSKLPNCEELALDELELWIEA CCCCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCHHHHHHHHEEEEECC >Mature Secondary Structure STRRHVMPIEPLSAGAFRRYGDVIEASDSAEQFTVNQGNATRYHDLATVDVAAEHGHPV CCCCCCCCCCCCCCCHHHHHCCEEECCCCCCEEEEECCCCCEEECEEEEEEECCCCCEE ISIFRAQPCNLPLRLRLLERHPIGSQAFIPMGNHPYLVIVAAADTPLGAQHIHCFRASPG EEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEEEECCCC QGVNFARGTWHPPVLPLHSVCDFLVIDRGGPSKLPNCEELALDELELWIEA CCCCCCCCCCCCCCCCHHHHCCEEEECCCCCCCCCCHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA