Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is amiC [H]

Identifier: 91787288

GI number: 91787288

Start: 1429913

End: 1431199

Strand: Direct

Name: amiC [H]

Synonym: Bpro_1393

Alternate gene names: 91787288

Gene position: 1429913-1431199 (Clockwise)

Preceding gene: 91787287

Following gene: 91787289

Centisome position: 27.5

GC content: 58.59

Gene sequence:

>1287_bases
ATGCAACGTCGTTTTACCCTCAAGGCGCTTACCGCTGCCGTCGCGCTGACGGGCCTTTCTGCCCTGTCAGCCCATGCCCA
GACCACGGGCACGATCAAGGTTGGCATTCTGCACAGCCTGTCGGGCACCATGGCCATTTCCGAGACTGTGTTGAAAGACA
CCGTGCTGATGGCGATTGACGAGATCAATGCCAAAGGCGGCGTGATGGGCAAGAAGCTTGAGCCCGTGATTGTGGATCCG
GCTTCCAACTGGCCGCTGTTTGCCGAAAAAACCAAGCAGCTGCTGGGCCAGGACAAGGTTTCGGTGATCTTCGGCTGCTG
GACGTCGGTGTCCCGCAAGTCGGTGCTGCCAGTCGTTGAGGAAATGAACGGCCTGCTGTTCTACCCCGTGCAGTACGAGG
GCGAAGAACTCTCCAAGAACGTGTTCTACACGGGTGCGGCACCTAACCAGCAGGCTATTCCTGCTGTGGACTACCTGATG
AGCAAGGCCGGTGGCGGCGCCAAGCGCTGGGTGCTGCTGGGTACCGACTATGTGTACCCACGCACCACCAACAAGATTTT
GCGCGCCTACCTGAAGAGCAAGGGCGTGAAAGACACCGACATCGACGAGAAGTACACCCCGTTTGGCCATTCCGACTACC
AGACCATCGTGGCTGACGTGAAGAAATTCTCTGCCGGCGGCAAGACGGCTGTGGTGTCCACCATCAACGGTGACTCCAAC
GTGCCTTTCTACAAGGAACTGGGCAATGCCGGCCTGAAGGCCAAGGACGTGCCTGTGGTCGCTTTCTCGGTGGGTGAAGA
AGAACTGCGCGGCGTGGACACGAAGCCGCTGGTCGGCCACCTGGCTGCCTGGAACTACTTCCAGTCGATCAAGAGCCCGG
CCAACACCGAGTTCATCAAGAAGTGGTCTGACTACGCCAAGGCCAAGGGCATTGCTGGCCACAAAGACAAGCCTTTGACC
AACGACCCGATGGAAGCCACCTACATCGGCATCAACATGTGGAAGCAGGCCGTCGAGAAGGCCAAGTCCACCGACACCGA
CAAGGTCATTGCCGCCATGGCTGGCCAGACCTTCAAGGCGCCGTCGGGCATCGTGTCGAAGATGGATGAGAAAAACCATC
ACCTGCACAAGTCCGTCTTCATCGGCGAGATCAAGGCCGACGGCCAGTTCAATGTGGTGTGGAAGACGCCTGGCCCGGTG
AAGGCCAAGCCATGGAGCCCGTACATCGAAGGCAACGACAAGAAGCCAGACGAGCCGGCGAAAAGCGCGACAGTAGCAAC
CAAATAA

Upstream 100 bases:

>100_bases
CCCCTCCGGTCCCCAGAATGAGTCCATCGCTGCGTAAAAGCCTCACTTTCGGGCTTGCGCGCAGCGAAACGCGATTTACC
ACCTTACCGGAGAAGCACTC

Downstream 100 bases:

>100_bases
GGTTGCCACCGCAAAGTCCGTTGGGCTAAGCGGTGCAAGCCGCACCTGGGTTGCAGAAAACAGGTGTGGTTTTTTTTACT
GTCGGGGTCAAGGGCTCGGG

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MQRRFTLKALTAAVALTGLSALSAHAQTTGTIKVGILHSLSGTMAISETVLKDTVLMAIDEINAKGGVMGKKLEPVIVDP
ASNWPLFAEKTKQLLGQDKVSVIFGCWTSVSRKSVLPVVEEMNGLLFYPVQYEGEELSKNVFYTGAAPNQQAIPAVDYLM
SKAGGGAKRWVLLGTDYVYPRTTNKILRAYLKSKGVKDTDIDEKYTPFGHSDYQTIVADVKKFSAGGKTAVVSTINGDSN
VPFYKELGNAGLKAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFQSIKSPANTEFIKKWSDYAKAKGIAGHKDKPLT
NDPMEATYIGINMWKQAVEKAKSTDTDKVIAAMAGQTFKAPSGIVSKMDEKNHHLHKSVFIGEIKADGQFNVVWKTPGPV
KAKPWSPYIEGNDKKPDEPAKSATVATK

Sequences:

>Translated_428_residues
MQRRFTLKALTAAVALTGLSALSAHAQTTGTIKVGILHSLSGTMAISETVLKDTVLMAIDEINAKGGVMGKKLEPVIVDP
ASNWPLFAEKTKQLLGQDKVSVIFGCWTSVSRKSVLPVVEEMNGLLFYPVQYEGEELSKNVFYTGAAPNQQAIPAVDYLM
SKAGGGAKRWVLLGTDYVYPRTTNKILRAYLKSKGVKDTDIDEKYTPFGHSDYQTIVADVKKFSAGGKTAVVSTINGDSN
VPFYKELGNAGLKAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFQSIKSPANTEFIKKWSDYAKAKGIAGHKDKPLT
NDPMEATYIGINMWKQAVEKAKSTDTDKVIAAMAGQTFKAPSGIVSKMDEKNHHLHKSVFIGEIKADGQFNVVWKTPGPV
KAKPWSPYIEGNDKKPDEPAKSATVATK
>Mature_428_residues
MQRRFTLKALTAAVALTGLSALSAHAQTTGTIKVGILHSLSGTMAISETVLKDTVLMAIDEINAKGGVMGKKLEPVIVDP
ASNWPLFAEKTKQLLGQDKVSVIFGCWTSVSRKSVLPVVEEMNGLLFYPVQYEGEELSKNVFYTGAAPNQQAIPAVDYLM
SKAGGGAKRWVLLGTDYVYPRTTNKILRAYLKSKGVKDTDIDEKYTPFGHSDYQTIVADVKKFSAGGKTAVVSTINGDSN
VPFYKELGNAGLKAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFQSIKSPANTEFIKKWSDYAKAKGIAGHKDKPLT
NDPMEATYIGINMWKQAVEKAKSTDTDKVIAAMAGQTFKAPSGIVSKMDEKNHHLHKSVFIGEIKADGQFNVVWKTPGPV
KAKPWSPYIEGNDKKPDEPAKSATVATK

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46445; Mature: 46445

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRFTLKALTAAVALTGLSALSAHAQTTGTIKVGILHSLSGTMAISETVLKDTVLMAID
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
EINAKGGVMGKKLEPVIVDPASNWPLFAEKTKQLLGQDKVSVIFGCWTSVSRKSVLPVVE
HCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEHHHCCHHHHHHHHH
EMNGLLFYPVQYEGEELSKNVFYTGAAPNQQAIPAVDYLMSKAGGGAKRWVLLGTDYVYP
HCCCEEEEEEEECCCHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCEECC
RTTNKILRAYLKSKGVKDTDIDEKYTPFGHSDYQTIVADVKKFSAGGKTAVVSTINGDSN
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCC
VPFYKELGNAGLKAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFQSIKSPANTEFIK
CCHHHHHCCCCCCCCCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
KWSDYAKAKGIAGHKDKPLTNDPMEATYIGINMWKQAVEKAKSTDTDKVIAAMAGQTFKA
HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
PSGIVSKMDEKNHHLHKSVFIGEIKADGQFNVVWKTPGPVKAKPWSPYIEGNDKKPDEPA
CHHHHHHHHHHCCHHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
KSATVATK
CCCCCCCC
>Mature Secondary Structure
MQRRFTLKALTAAVALTGLSALSAHAQTTGTIKVGILHSLSGTMAISETVLKDTVLMAID
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH
EINAKGGVMGKKLEPVIVDPASNWPLFAEKTKQLLGQDKVSVIFGCWTSVSRKSVLPVVE
HCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEHHHCCHHHHHHHHH
EMNGLLFYPVQYEGEELSKNVFYTGAAPNQQAIPAVDYLMSKAGGGAKRWVLLGTDYVYP
HCCCEEEEEEEECCCHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCEECC
RTTNKILRAYLKSKGVKDTDIDEKYTPFGHSDYQTIVADVKKFSAGGKTAVVSTINGDSN
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCC
VPFYKELGNAGLKAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFQSIKSPANTEFIK
CCHHHHHCCCCCCCCCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH
KWSDYAKAKGIAGHKDKPLTNDPMEATYIGINMWKQAVEKAKSTDTDKVIAAMAGQTFKA
HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
PSGIVSKMDEKNHHLHKSVFIGEIKADGQFNVVWKTPGPVKAKPWSPYIEGNDKKPDEPA
CHHHHHHHHHHCCHHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
KSATVATK
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]