Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is amiC [H]
Identifier: 91787288
GI number: 91787288
Start: 1429913
End: 1431199
Strand: Direct
Name: amiC [H]
Synonym: Bpro_1393
Alternate gene names: 91787288
Gene position: 1429913-1431199 (Clockwise)
Preceding gene: 91787287
Following gene: 91787289
Centisome position: 27.5
GC content: 58.59
Gene sequence:
>1287_bases ATGCAACGTCGTTTTACCCTCAAGGCGCTTACCGCTGCCGTCGCGCTGACGGGCCTTTCTGCCCTGTCAGCCCATGCCCA GACCACGGGCACGATCAAGGTTGGCATTCTGCACAGCCTGTCGGGCACCATGGCCATTTCCGAGACTGTGTTGAAAGACA CCGTGCTGATGGCGATTGACGAGATCAATGCCAAAGGCGGCGTGATGGGCAAGAAGCTTGAGCCCGTGATTGTGGATCCG GCTTCCAACTGGCCGCTGTTTGCCGAAAAAACCAAGCAGCTGCTGGGCCAGGACAAGGTTTCGGTGATCTTCGGCTGCTG GACGTCGGTGTCCCGCAAGTCGGTGCTGCCAGTCGTTGAGGAAATGAACGGCCTGCTGTTCTACCCCGTGCAGTACGAGG GCGAAGAACTCTCCAAGAACGTGTTCTACACGGGTGCGGCACCTAACCAGCAGGCTATTCCTGCTGTGGACTACCTGATG AGCAAGGCCGGTGGCGGCGCCAAGCGCTGGGTGCTGCTGGGTACCGACTATGTGTACCCACGCACCACCAACAAGATTTT GCGCGCCTACCTGAAGAGCAAGGGCGTGAAAGACACCGACATCGACGAGAAGTACACCCCGTTTGGCCATTCCGACTACC AGACCATCGTGGCTGACGTGAAGAAATTCTCTGCCGGCGGCAAGACGGCTGTGGTGTCCACCATCAACGGTGACTCCAAC GTGCCTTTCTACAAGGAACTGGGCAATGCCGGCCTGAAGGCCAAGGACGTGCCTGTGGTCGCTTTCTCGGTGGGTGAAGA AGAACTGCGCGGCGTGGACACGAAGCCGCTGGTCGGCCACCTGGCTGCCTGGAACTACTTCCAGTCGATCAAGAGCCCGG CCAACACCGAGTTCATCAAGAAGTGGTCTGACTACGCCAAGGCCAAGGGCATTGCTGGCCACAAAGACAAGCCTTTGACC AACGACCCGATGGAAGCCACCTACATCGGCATCAACATGTGGAAGCAGGCCGTCGAGAAGGCCAAGTCCACCGACACCGA CAAGGTCATTGCCGCCATGGCTGGCCAGACCTTCAAGGCGCCGTCGGGCATCGTGTCGAAGATGGATGAGAAAAACCATC ACCTGCACAAGTCCGTCTTCATCGGCGAGATCAAGGCCGACGGCCAGTTCAATGTGGTGTGGAAGACGCCTGGCCCGGTG AAGGCCAAGCCATGGAGCCCGTACATCGAAGGCAACGACAAGAAGCCAGACGAGCCGGCGAAAAGCGCGACAGTAGCAAC CAAATAA
Upstream 100 bases:
>100_bases CCCCTCCGGTCCCCAGAATGAGTCCATCGCTGCGTAAAAGCCTCACTTTCGGGCTTGCGCGCAGCGAAACGCGATTTACC ACCTTACCGGAGAAGCACTC
Downstream 100 bases:
>100_bases GGTTGCCACCGCAAAGTCCGTTGGGCTAAGCGGTGCAAGCCGCACCTGGGTTGCAGAAAACAGGTGTGGTTTTTTTTACT GTCGGGGTCAAGGGCTCGGG
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MQRRFTLKALTAAVALTGLSALSAHAQTTGTIKVGILHSLSGTMAISETVLKDTVLMAIDEINAKGGVMGKKLEPVIVDP ASNWPLFAEKTKQLLGQDKVSVIFGCWTSVSRKSVLPVVEEMNGLLFYPVQYEGEELSKNVFYTGAAPNQQAIPAVDYLM SKAGGGAKRWVLLGTDYVYPRTTNKILRAYLKSKGVKDTDIDEKYTPFGHSDYQTIVADVKKFSAGGKTAVVSTINGDSN VPFYKELGNAGLKAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFQSIKSPANTEFIKKWSDYAKAKGIAGHKDKPLT NDPMEATYIGINMWKQAVEKAKSTDTDKVIAAMAGQTFKAPSGIVSKMDEKNHHLHKSVFIGEIKADGQFNVVWKTPGPV KAKPWSPYIEGNDKKPDEPAKSATVATK
Sequences:
>Translated_428_residues MQRRFTLKALTAAVALTGLSALSAHAQTTGTIKVGILHSLSGTMAISETVLKDTVLMAIDEINAKGGVMGKKLEPVIVDP ASNWPLFAEKTKQLLGQDKVSVIFGCWTSVSRKSVLPVVEEMNGLLFYPVQYEGEELSKNVFYTGAAPNQQAIPAVDYLM SKAGGGAKRWVLLGTDYVYPRTTNKILRAYLKSKGVKDTDIDEKYTPFGHSDYQTIVADVKKFSAGGKTAVVSTINGDSN VPFYKELGNAGLKAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFQSIKSPANTEFIKKWSDYAKAKGIAGHKDKPLT NDPMEATYIGINMWKQAVEKAKSTDTDKVIAAMAGQTFKAPSGIVSKMDEKNHHLHKSVFIGEIKADGQFNVVWKTPGPV KAKPWSPYIEGNDKKPDEPAKSATVATK >Mature_428_residues MQRRFTLKALTAAVALTGLSALSAHAQTTGTIKVGILHSLSGTMAISETVLKDTVLMAIDEINAKGGVMGKKLEPVIVDP ASNWPLFAEKTKQLLGQDKVSVIFGCWTSVSRKSVLPVVEEMNGLLFYPVQYEGEELSKNVFYTGAAPNQQAIPAVDYLM SKAGGGAKRWVLLGTDYVYPRTTNKILRAYLKSKGVKDTDIDEKYTPFGHSDYQTIVADVKKFSAGGKTAVVSTINGDSN VPFYKELGNAGLKAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFQSIKSPANTEFIKKWSDYAKAKGIAGHKDKPLT NDPMEATYIGINMWKQAVEKAKSTDTDKVIAAMAGQTFKAPSGIVSKMDEKNHHLHKSVFIGEIKADGQFNVVWKTPGPV KAKPWSPYIEGNDKKPDEPAKSATVATK
Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000709 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46445; Mature: 46445
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRRFTLKALTAAVALTGLSALSAHAQTTGTIKVGILHSLSGTMAISETVLKDTVLMAID CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH EINAKGGVMGKKLEPVIVDPASNWPLFAEKTKQLLGQDKVSVIFGCWTSVSRKSVLPVVE HCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEHHHCCHHHHHHHHH EMNGLLFYPVQYEGEELSKNVFYTGAAPNQQAIPAVDYLMSKAGGGAKRWVLLGTDYVYP HCCCEEEEEEEECCCHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCEECC RTTNKILRAYLKSKGVKDTDIDEKYTPFGHSDYQTIVADVKKFSAGGKTAVVSTINGDSN CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCC VPFYKELGNAGLKAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFQSIKSPANTEFIK CCHHHHHCCCCCCCCCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH KWSDYAKAKGIAGHKDKPLTNDPMEATYIGINMWKQAVEKAKSTDTDKVIAAMAGQTFKA HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC PSGIVSKMDEKNHHLHKSVFIGEIKADGQFNVVWKTPGPVKAKPWSPYIEGNDKKPDEPA CHHHHHHHHHHCCHHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC KSATVATK CCCCCCCC >Mature Secondary Structure MQRRFTLKALTAAVALTGLSALSAHAQTTGTIKVGILHSLSGTMAISETVLKDTVLMAID CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHH EINAKGGVMGKKLEPVIVDPASNWPLFAEKTKQLLGQDKVSVIFGCWTSVSRKSVLPVVE HCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEHHHCCHHHHHHHHH EMNGLLFYPVQYEGEELSKNVFYTGAAPNQQAIPAVDYLMSKAGGGAKRWVLLGTDYVYP HCCCEEEEEEEECCCHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCEECC RTTNKILRAYLKSKGVKDTDIDEKYTPFGHSDYQTIVADVKKFSAGGKTAVVSTINGDSN CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCC VPFYKELGNAGLKAKDVPVVAFSVGEEELRGVDTKPLVGHLAAWNYFQSIKSPANTEFIK CCHHHHHCCCCCCCCCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH KWSDYAKAKGIAGHKDKPLTNDPMEATYIGINMWKQAVEKAKSTDTDKVIAAMAGQTFKA HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC PSGIVSKMDEKNHHLHKSVFIGEIKADGQFNVVWKTPGPVKAKPWSPYIEGNDKKPDEPA CHHHHHHHHHHCCHHHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC KSATVATK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]