Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787250
Identifier: 91787250
GI number: 91787250
Start: 1395293
End: 1395577
Strand: Direct
Name: 91787250
Synonym: Bpro_1355
Alternate gene names: NA
Gene position: 1395293-1395577 (Clockwise)
Preceding gene: 91787249
Following gene: 91787251
Centisome position: 26.83
GC content: 60.7
Gene sequence:
>285_bases ATGAAGCTGGGACCCAATACTTGGCAACCCGGCCAGGACATTTTTATGAACATTGATCACAACAAAATCGCGGTGGGCAA GTACCTTGTTTCCCCGCTTGCCAAAGAGCAGGGCGAAGGACGCTACGCCGCTTCGGTATCCATCCGTTCCGGGCGCGGCA GCGCGTCGCATGACCGCGTGCTGCGTTTCAGCGGCCTTTTTGACAGCGCCGCAGCCGCGCTGCATTACGCCACCGAGCAC GCGCTGGGCTGGATTCATGAGCGCTCATCGCCGGCTTGCGCCTGA
Upstream 100 bases:
>100_bases CAAAGGCTCAACCGGCCCAGCCCTTTCCGAAGGGCCTGGCAGGCAGAAACCGAACAGCCGCCGGCTTGTTCGCAAGCCGT CTACTCTCTATTTTTCGACT
Downstream 100 bases:
>100_bases CGGTCGGCGGCCCCCGTCGGGGTCAGCCGGGACGGCCAGGTAGACGTTAGATAACCAAACCAGCCAAAAGACAGACAGAT AGTCAAACAGGTTTTTTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MKLGPNTWQPGQDIFMNIDHNKIAVGKYLVSPLAKEQGEGRYAASVSIRSGRGSASHDRVLRFSGLFDSAAAALHYATEH ALGWIHERSSPACA
Sequences:
>Translated_94_residues MKLGPNTWQPGQDIFMNIDHNKIAVGKYLVSPLAKEQGEGRYAASVSIRSGRGSASHDRVLRFSGLFDSAAAALHYATEH ALGWIHERSSPACA >Mature_94_residues MKLGPNTWQPGQDIFMNIDHNKIAVGKYLVSPLAKEQGEGRYAASVSIRSGRGSASHDRVLRFSGLFDSAAAALHYATEH ALGWIHERSSPACA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10180; Mature: 10180
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLGPNTWQPGQDIFMNIDHNKIAVGKYLVSPLAKEQGEGRYAASVSIRSGRGSASHDRV CCCCCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCEE LRFSGLFDSAAAALHYATEHALGWIHERSSPACA EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKLGPNTWQPGQDIFMNIDHNKIAVGKYLVSPLAKEQGEGRYAASVSIRSGRGSASHDRV CCCCCCCCCCCCCEEEECCCCEEEHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCEE LRFSGLFDSAAAALHYATEHALGWIHERSSPACA EEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA