Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is pulE [H]
Identifier: 91787226
GI number: 91787226
Start: 1369461
End: 1370885
Strand: Direct
Name: pulE [H]
Synonym: Bpro_1330
Alternate gene names: 91787226
Gene position: 1369461-1370885 (Clockwise)
Preceding gene: 91787225
Following gene: 91787227
Centisome position: 26.33
GC content: 65.4
Gene sequence:
>1425_bases ATGCGCTACCCATTGCCTTACGCCTTTGCCCGCAGCAATACCCTGCTGCTGGAAGACGATGGCCATGCGCTGACGCTGTG GCATCCGGCCCGGCCCGACCCTGCGGCCCTGGGTGAAGTGATGCGCAAGTTCGCGGCGCACAGCCCCGCGCTGGTCCTTC AGTGCGCCGACGCGGGAACCTTGACCCAGCGCATCAGCGCCGCCTACGCGGCAGGGGAGTCGAGTGCGGCCGCCGTGGTG AGCGAGGTGGAGTCCGACGCCGACCTGTCGCGCATCATGCAGGAGTTGCCGGCGGTCGAGGATCTGCTGGAAACCTCCGA TGACGCGCCCATCATCCGCATGCTCAATGCGCTGTTGACACAGGCCGCGCGCGACGGCGCGAGCGACATCCACATCGAGC CTTACGAGCGGCATTCGAGCGTGCGTTTTCGCGTGGACGGCACCCTGCGCGAAGTCGTGCAGCCCAACCGGGCGCTGCAC GCCGCGCTGATCTCGCGCCTGAAGATCATGGCGGACCTGGATATTTCGGAAAAACGCCTTCCGCAGGATGGCCGCATCAG CCTGCGCATTGGCACGCGAGCGGTGGACGTGCGTGTGAGCACCTTGCCCAGCGCCCACGGTGAGCGCGCCGTGTTGCGCC TGCTGGACAAGAGCGAGAGCAAGCTGAGCCTGGAGTCGGTCGGCATGCAGGGTGATGTGCTTCACCGTTTCGAACACCTG ATCGCCCAGCCGCACGGCATCATCCTGGTCACCGGCCCCACGGGTTCGGGTAAAACCACCACCCTTTATGCTGCCTTGCA GCGGCTCGATGCCAGCGCCAGCAACATCATGACGGTCGAAGATCCCATCGAGTACGAGCTTGCGGGCATCGGGCAGACGC AGGTCAATTCAAAGATAGACCTGAGCTTTGCCAAGGCGCTGCGCGCCATCCTGCGCCAGGACCCGGACGTGATCATGATC GGTGAGATCCGGGATTTTGAGACCGCGCAGATCGCCATACAGGCCTCGCTGACCGGCCACCTGGTGCTCGCCACGCTGCA CACCAATGATGCGTCCAGTGCCGTGACGCGCCTGACCGATATCGGTGTGGAGCCCTTTTTGCTGAGTTCGTCCCTGCTCG GCGTGCTGGCACAGCGGCTGGTGCGCAAGCGGTGCACCTACTGCCATGCTTCTTCGGCAGGTCCGGGCCTGGCCGCCGGC TGCGAGCATTGCGGCTATACCGGTTACGCGGGCCGTACGGGCGTCTTTGAGTTGCTGGTGACCGATGACGCTGTTCGCGC CCAGATTCACAACCGCGCGTCTGAGGCAGAAATTCGCGCAGCCGCGCTGCAGGCGGGCATGATGCTGATGCGCGACGACG GTGAGCGGCTGGTCACCGCCGGCGTCACCTCGCGCGAGGAGTTGCTGCGCGTGACCCCCGACTGA
Upstream 100 bases:
>100_bases CACCAGAAGCACCGCCGGCAGTGCCGACTGTCACCCCGCCGCCCGTCGCAACCCCGCTCGTGCCCGCCCCGGGCCAGTAA ACCCGAACCAGTAAACCCCT
Downstream 100 bases:
>100_bases ACCCGCACCGGCCCGAATACTGCGCCAAGCCATCATGCCCGCCTATTCTTTTGAGGCCATGCAGAACGACGGCAAGCTCC GCCGGGGGGTGATCGAGGCT
Product: type II secretion system protein E
Products: NA
Alternate protein names: Pullulanase secretion protein pulE; Type II traffic warden ATPase [H]
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MRYPLPYAFARSNTLLLEDDGHALTLWHPARPDPAALGEVMRKFAAHSPALVLQCADAGTLTQRISAAYAAGESSAAAVV SEVESDADLSRIMQELPAVEDLLETSDDAPIIRMLNALLTQAARDGASDIHIEPYERHSSVRFRVDGTLREVVQPNRALH AALISRLKIMADLDISEKRLPQDGRISLRIGTRAVDVRVSTLPSAHGERAVLRLLDKSESKLSLESVGMQGDVLHRFEHL IAQPHGIILVTGPTGSGKTTTLYAALQRLDASASNIMTVEDPIEYELAGIGQTQVNSKIDLSFAKALRAILRQDPDVIMI GEIRDFETAQIAIQASLTGHLVLATLHTNDASSAVTRLTDIGVEPFLLSSSLLGVLAQRLVRKRCTYCHASSAGPGLAAG CEHCGYTGYAGRTGVFELLVTDDAVRAQIHNRASEAEIRAAALQAGMMLMRDDGERLVTAGVTSREELLRVTPD
Sequences:
>Translated_474_residues MRYPLPYAFARSNTLLLEDDGHALTLWHPARPDPAALGEVMRKFAAHSPALVLQCADAGTLTQRISAAYAAGESSAAAVV SEVESDADLSRIMQELPAVEDLLETSDDAPIIRMLNALLTQAARDGASDIHIEPYERHSSVRFRVDGTLREVVQPNRALH AALISRLKIMADLDISEKRLPQDGRISLRIGTRAVDVRVSTLPSAHGERAVLRLLDKSESKLSLESVGMQGDVLHRFEHL IAQPHGIILVTGPTGSGKTTTLYAALQRLDASASNIMTVEDPIEYELAGIGQTQVNSKIDLSFAKALRAILRQDPDVIMI GEIRDFETAQIAIQASLTGHLVLATLHTNDASSAVTRLTDIGVEPFLLSSSLLGVLAQRLVRKRCTYCHASSAGPGLAAG CEHCGYTGYAGRTGVFELLVTDDAVRAQIHNRASEAEIRAAALQAGMMLMRDDGERLVTAGVTSREELLRVTPD >Mature_474_residues MRYPLPYAFARSNTLLLEDDGHALTLWHPARPDPAALGEVMRKFAAHSPALVLQCADAGTLTQRISAAYAAGESSAAAVV SEVESDADLSRIMQELPAVEDLLETSDDAPIIRMLNALLTQAARDGASDIHIEPYERHSSVRFRVDGTLREVVQPNRALH AALISRLKIMADLDISEKRLPQDGRISLRIGTRAVDVRVSTLPSAHGERAVLRLLDKSESKLSLESVGMQGDVLHRFEHL IAQPHGIILVTGPTGSGKTTTLYAALQRLDASASNIMTVEDPIEYELAGIGQTQVNSKIDLSFAKALRAILRQDPDVIMI GEIRDFETAQIAIQASLTGHLVLATLHTNDASSAVTRLTDIGVEPFLLSSSLLGVLAQRLVRKRCTYCHASSAGPGLAAG CEHCGYTGYAGRTGVFELLVTDDAVRAQIHNRASEAEIRAAALQAGMMLMRDDGERLVTAGVTSREELLRVTPD
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of pullulanase [H]
COG id: COG2804
COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP E family [H]
Homologues:
Organism=Escherichia coli, GI1789723, Length=440, Percent_Identity=53.4090909090909, Blast_Score=461, Evalue=1e-131, Organism=Escherichia coli, GI1786296, Length=399, Percent_Identity=45.1127819548872, Blast_Score=320, Evalue=2e-88, Organism=Escherichia coli, GI87082188, Length=241, Percent_Identity=39.0041493775934, Blast_Score=115, Evalue=4e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR013369 - InterPro: IPR001482 [H]
Pfam domain/function: PF00437 GSPII_E [H]
EC number: NA
Molecular weight: Translated: 51137; Mature: 51137
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS00662 T2SP_E
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYPLPYAFARSNTLLLEDDGHALTLWHPARPDPAALGEVMRKFAAHSPALVLQCADAGT CCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCH LTQRISAAYAAGESSAAAVVSEVESDADLSRIMQELPAVEDLLETSDDAPIIRMLNALLT HHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHH QAARDGASDIHIEPYERHSSVRFRVDGTLREVVQPNRALHAALISRLKIMADLDISEKRL HHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHC PQDGRISLRIGTRAVDVRVSTLPSAHGERAVLRLLDKSESKLSLESVGMQGDVLHRFEHL CCCCEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHCCCCCEEHHHCCCCHHHHHHHHHH IAQPHGIILVTGPTGSGKTTTLYAALQRLDASASNIMTVEDPIEYELAGIGQTQVNSKID HCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCHHCCCEEH LSFAKALRAILRQDPDVIMIGEIRDFETAQIAIQASLTGHLVLATLHTNDASSAVTRLTD HHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEECCCEEEEEEEECCCHHHHHHHHHH IGVEPFLLSSSLLGVLAQRLVRKRCTYCHASSAGPGLAAGCEHCGYTGYAGRTGVFELLV CCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHCCCCCCCCCCCEEEEEE TDDAVRAQIHNRASEAEIRAAALQAGMMLMRDDGERLVTAGVTSREELLRVTPD ECHHHHHHHHHCCHHHHHHHHHHHHCEEEEECCCCEEEEECCCCHHHHEECCCC >Mature Secondary Structure MRYPLPYAFARSNTLLLEDDGHALTLWHPARPDPAALGEVMRKFAAHSPALVLQCADAGT CCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCH LTQRISAAYAAGESSAAAVVSEVESDADLSRIMQELPAVEDLLETSDDAPIIRMLNALLT HHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHH QAARDGASDIHIEPYERHSSVRFRVDGTLREVVQPNRALHAALISRLKIMADLDISEKRL HHHCCCCCCCCCCCCCCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHC PQDGRISLRIGTRAVDVRVSTLPSAHGERAVLRLLDKSESKLSLESVGMQGDVLHRFEHL CCCCEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHCCCCCEEHHHCCCCHHHHHHHHHH IAQPHGIILVTGPTGSGKTTTLYAALQRLDASASNIMTVEDPIEYELAGIGQTQVNSKID HCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCHHCCCEEH LSFAKALRAILRQDPDVIMIGEIRDFETAQIAIQASLTGHLVLATLHTNDASSAVTRLTD HHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEECCCEEEEEEEECCCHHHHHHHHHH IGVEPFLLSSSLLGVLAQRLVRKRCTYCHASSAGPGLAAGCEHCGYTGYAGRTGVFELLV CCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHCCCCCCCCCCCEEEEEE TDDAVRAQIHNRASEAEIRAAALQAGMMLMRDDGERLVTAGVTSREELLRVTPD ECHHHHHHHHHCCHHHHHHHHHHHHCEEEEECCCCEEEEECCCCHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1738317; 2677007 [H]