Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787082

Identifier: 91787082

GI number: 91787082

Start: 1224757

End: 1225950

Strand: Direct

Name: 91787082

Synonym: Bpro_1185

Alternate gene names: NA

Gene position: 1224757-1225950 (Clockwise)

Preceding gene: 91787081

Following gene: 91787083

Centisome position: 23.55

GC content: 65.83

Gene sequence:

>1194_bases
GTGATCAGCCTGGCCGGCCGCGACATCCTGCACGCTTGGGGAAAGTTCGTTCTCACGGGCTTTGGGTTGGGGTTGCTGAT
CGGCGTCACACTGACCTTTGCCGGGGTTTACCGCGGCATGGTGGACGACGCCAAGGTGCTGCTCGCCAACAGCGGTGCCG
ACCTGTGGGTGGTACAGAAGGACACGCAGGGGCCCTACGCGGAGTCGTCCAGCCTGCGTGACGACGCCTATCGCAGCGTG
CGCGGCCTGCCCGGCGTCGAGCAGGCCGCAAATGTCACTTACCTGACCATGCAGGTGCGCGGCAGCGCCGGTGACGTGCG
CGCCATGGTGGTCGGCTTCGAGCCCGGCCAGCCGGGTGAGCCCGGCTACCTGATGGCGGGCCGGCGGATCACCCGCAGCC
ACTATGAAGCCGTGGCCGACGTGAAGACCGGCTTCGCGCTCGACGAGCGCATCCGCATCCGCCGCCACGAATACACGGTG
GTGGGACTGACCCGGCGCATGGTGTCTTCCGGTGGCGACCCGATGGTGTTCATCCCGCTGAAGGACGCGCAGGAAGCGCA
GTTCCTGAAGGACAACGACGCCATCGTCAGCGAGCGCGAGCGCACCGCTGCCAATCCGGCTTTCAACCGCCCCGGTGTGC
CCGGTTTGCTGGAGGCCGTCACCGCCTCCCAAGCCAGCAGCCACAACGTCAACGCCGTGCTGGTGCGCATGGCCGATGGC
CACTCTCCCGAAGCGCTGGTGCAAACCATCCGGCGCTGGAAACACCTGCAGGCTTACTCGCGCACCGAGATGGAAGAACT
GCTGATCGCCAAGCTGATTGCCACCGCCGCCAGGCAGATCGGCATGTTCCTGGTGATCCTGGCGGTGGTCAGCGCGGCCA
TCGTCGCCTTCATCATCTACACGATGACGCTGGGCAAGATCCGCGAGATCGCCGTGCTCAAGCTCATCGGCACCCATGAC
CGCACCATCGCCAGCATGATCCTGCAACAGGCGCTGGGGCTGGGGGTAATCGGCTTCATCGTTGGCAAGCTGTCCGCCAG
CCTGTGGGCGCCACTGTTTCCGAAGTACGTGTTGCTCGAGACGTCGGATGCTGTGCTCGGCTTCTTCCTCGCCATGGTGG
TGTGCGCACTGGCCAGCACGCTGGCGATCCGGGTGGCGCTCAAGGTCGATCCGGCTGCGGCGATTGGTGGCTGA

Upstream 100 bases:

>100_bases
ATGGCCTGAAGGCCGGCAACGAGGTGGTGGTCTACAGCGGGCGCGAACTGGAGGCCGGCAGTCGAATCAAGGTCGTGCCC
TCGCTGGTCGAGGCTGCAAA

Downstream 100 bases:

>100_bases
GGTGGCTGCCAGCATACCCGCCACCGTCGGCATCCGGATTGATGGGCTGAGCAAGCGCTATGGCACCGGCACGACCGCCG
TTGATGCGCTGAAGGACGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MISLAGRDILHAWGKFVLTGFGLGLLIGVTLTFAGVYRGMVDDAKVLLANSGADLWVVQKDTQGPYAESSSLRDDAYRSV
RGLPGVEQAANVTYLTMQVRGSAGDVRAMVVGFEPGQPGEPGYLMAGRRITRSHYEAVADVKTGFALDERIRIRRHEYTV
VGLTRRMVSSGGDPMVFIPLKDAQEAQFLKDNDAIVSERERTAANPAFNRPGVPGLLEAVTASQASSHNVNAVLVRMADG
HSPEALVQTIRRWKHLQAYSRTEMEELLIAKLIATAARQIGMFLVILAVVSAAIVAFIIYTMTLGKIREIAVLKLIGTHD
RTIASMILQQALGLGVIGFIVGKLSASLWAPLFPKYVLLETSDAVLGFFLAMVVCALASTLAIRVALKVDPAAAIGG

Sequences:

>Translated_397_residues
MISLAGRDILHAWGKFVLTGFGLGLLIGVTLTFAGVYRGMVDDAKVLLANSGADLWVVQKDTQGPYAESSSLRDDAYRSV
RGLPGVEQAANVTYLTMQVRGSAGDVRAMVVGFEPGQPGEPGYLMAGRRITRSHYEAVADVKTGFALDERIRIRRHEYTV
VGLTRRMVSSGGDPMVFIPLKDAQEAQFLKDNDAIVSERERTAANPAFNRPGVPGLLEAVTASQASSHNVNAVLVRMADG
HSPEALVQTIRRWKHLQAYSRTEMEELLIAKLIATAARQIGMFLVILAVVSAAIVAFIIYTMTLGKIREIAVLKLIGTHD
RTIASMILQQALGLGVIGFIVGKLSASLWAPLFPKYVLLETSDAVLGFFLAMVVCALASTLAIRVALKVDPAAAIGG
>Mature_397_residues
MISLAGRDILHAWGKFVLTGFGLGLLIGVTLTFAGVYRGMVDDAKVLLANSGADLWVVQKDTQGPYAESSSLRDDAYRSV
RGLPGVEQAANVTYLTMQVRGSAGDVRAMVVGFEPGQPGEPGYLMAGRRITRSHYEAVADVKTGFALDERIRIRRHEYTV
VGLTRRMVSSGGDPMVFIPLKDAQEAQFLKDNDAIVSERERTAANPAFNRPGVPGLLEAVTASQASSHNVNAVLVRMADG
HSPEALVQTIRRWKHLQAYSRTEMEELLIAKLIATAARQIGMFLVILAVVSAAIVAFIIYTMTLGKIREIAVLKLIGTHD
RTIASMILQQALGLGVIGFIVGKLSASLWAPLFPKYVLLETSDAVLGFFLAMVVCALASTLAIRVALKVDPAAAIGG

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 42689; Mature: 42689

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLAGRDILHAWGKFVLTGFGLGLLIGVTLTFAGVYRGMVDDAKVLLANSGADLWVVQK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEE
DTQGPYAESSSLRDDAYRSVRGLPGVEQAANVTYLTMQVRGSAGDVRAMVVGFEPGQPGE
CCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCEEEEEEEEECCCCCEEEEEEEECCCCCCC
PGYLMAGRRITRSHYEAVADVKTGFALDERIRIRRHEYTVVGLTRRMVSSGGDPMVFIPL
CCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEHHHHHHHHHCCCCCEEEEEC
KDAQEAQFLKDNDAIVSERERTAANPAFNRPGVPGLLEAVTASQASSHNVNAVLVRMADG
CCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCC
HSPEALVQTIRRWKHLQAYSRTEMEELLIAKLIATAARQIGMFLVILAVVSAAIVAFIIY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMTLGKIREIAVLKLIGTHDRTIASMILQQALGLGVIGFIVGKLSASLWAPLFPKYVLLE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEE
TSDAVLGFFLAMVVCALASTLAIRVALKVDPAAAIGG
CCHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHCCCC
>Mature Secondary Structure
MISLAGRDILHAWGKFVLTGFGLGLLIGVTLTFAGVYRGMVDDAKVLLANSGADLWVVQK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEE
DTQGPYAESSSLRDDAYRSVRGLPGVEQAANVTYLTMQVRGSAGDVRAMVVGFEPGQPGE
CCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCEEEEEEEEECCCCCEEEEEEEECCCCCCC
PGYLMAGRRITRSHYEAVADVKTGFALDERIRIRRHEYTVVGLTRRMVSSGGDPMVFIPL
CCEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEHHHHHHHHHCCCCCEEEEEC
KDAQEAQFLKDNDAIVSERERTAANPAFNRPGVPGLLEAVTASQASSHNVNAVLVRMADG
CCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCC
HSPEALVQTIRRWKHLQAYSRTEMEELLIAKLIATAARQIGMFLVILAVVSAAIVAFIIY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMTLGKIREIAVLKLIGTHDRTIASMILQQALGLGVIGFIVGKLSASLWAPLFPKYVLLE
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEE
TSDAVLGFFLAMVVCALASTLAIRVALKVDPAAAIGG
CCHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]