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The map label for this gene is yqgF [C]

Identifier: 91787040

GI number: 91787040

Start: 1186310

End: 1186726

Strand: Direct

Name: yqgF [C]

Synonym: Bpro_1143

Alternate gene names: 91787040

Gene position: 1186310-1186726 (Clockwise)

Preceding gene: 91787039

Following gene: 91787041

Centisome position: 22.81

GC content: 61.63

Gene sequence:

>417_bases
ATGAGCCTTGCGGCTGTGCCTCATCTCACTGCGGGTCTCCAAACCTTTCTGGCTTTCGACTTCGGTCTTCAACGCACCGG
CGTTGCGACCGGCAATGTGCTGACCCGCACCGCCACACCGCAAGCCACCATCGCCGCCACGGGCGATGCCCGCCTCAAGG
CGATTGAACTCCGGATCAGGGAATGGCAGCCCGATGCGCTCGTCGTCGGAATTCCATTTCATCCGGATGGCGCGAGCCAC
GAAAATACCCGGCGCGCGCAAAAATTCTCCCGCCAGTTGCGGGCGCGGTTTGGTCTCAAGGTGTTTGAGGTCGACGAGCG
CTACAGCACGACAGAAGCCCTGGCCGGCGGCGCTGCGGACGCCGATGCCGCATCGGCGTGCATTATTCTCGAACAGTTTT
TAAGGAGCCTTCCATGA

Upstream 100 bases:

>100_bases
TGGCGGTGATTTTTGACACGCCGGTAGAGCAGCGCTACGACAAGGCCCTGATGCTGCTGGGTCTGCAGAGCTGGATGCTG
TCTCCCGATGCTGGCCACGC

Downstream 100 bases:

>100_bases
GCAGTCTGACCCTGGATGCCGAGGCGCTGTATGGCGATTTGCTGCGCGGCATGCGGCTGCAGCTGGCCGCCTATGCCCAG
CCACCCCGGCTGGTGGGGGT

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSLAAVPHLTAGLQTFLAFDFGLQRTGVATGNVLTRTATPQATIAATGDARLKAIELRIREWQPDALVVGIPFHPDGASH
ENTRRAQKFSRQLRARFGLKVFEVDERYSTTEALAGGAADADAASACIILEQFLRSLP

Sequences:

>Translated_138_residues
MSLAAVPHLTAGLQTFLAFDFGLQRTGVATGNVLTRTATPQATIAATGDARLKAIELRIREWQPDALVVGIPFHPDGASH
ENTRRAQKFSRQLRARFGLKVFEVDERYSTTEALAGGAADADAASACIILEQFLRSLP
>Mature_137_residues
SLAAVPHLTAGLQTFLAFDFGLQRTGVATGNVLTRTATPQATIAATGDARLKAIELRIREWQPDALVVGIPFHPDGASHE
NTRRAQKFSRQLRARFGLKVFEVDERYSTTEALAGGAADADAASACIILEQFLRSLP

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family

Homologues:

Organism=Escherichia coli, GI1789318, Length=131, Percent_Identity=41.9847328244275, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVX_POLSJ (Q12EE8)

Other databases:

- EMBL:   CP000316
- RefSeq:   YP_547992.1
- ProteinModelPortal:   Q12EE8
- SMR:   Q12EE8
- STRING:   Q12EE8
- GeneID:   4011881
- GenomeReviews:   CP000316_GR
- KEGG:   pol:Bpro_1143
- NMPDR:   fig|296591.1.peg.3260
- eggNOG:   COG0816
- HOGENOM:   HBG607919
- OMA:   WQPDALV
- PhylomeDB:   Q12EE8
- ProtClustDB:   PRK00109
- BioCyc:   PSP296591:BPRO_1143-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00651
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337
- Gene3D:   G3DSA:3.30.420.140
- SMART:   SM00732
- TIGRFAMs:   TIGR00250

Pfam domain/function: PF03652 UPF0081; SSF53098 RNaseH_fold

EC number: NA

Molecular weight: Translated: 14878; Mature: 14747

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAAVPHLTAGLQTFLAFDFGLQRTGVATGNVLTRTATPQATIAATGDARLKAIELRIR
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEEEEEEE
EWQPDALVVGIPFHPDGASHENTRRAQKFSRQLRARFGLKVFEVDERYSTTEALAGGAAD
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCCC
ADAASACIILEQFLRSLP
CHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLAAVPHLTAGLQTFLAFDFGLQRTGVATGNVLTRTATPQATIAATGDARLKAIELRIR
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEEEEEEE
EWQPDALVVGIPFHPDGASHENTRRAQKFSRQLRARFGLKVFEVDERYSTTEALAGGAAD
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCCCC
ADAASACIILEQFLRSLP
CHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA