Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is pilH [H]

Identifier: 91787035

GI number: 91787035

Start: 1174509

End: 1174874

Strand: Direct

Name: pilH [H]

Synonym: Bpro_1137

Alternate gene names: 91787035

Gene position: 1174509-1174874 (Clockwise)

Preceding gene: 91787034

Following gene: 91787036

Centisome position: 22.59

GC content: 53.28

Gene sequence:

>366_bases
ATGGCGATTAAGAAAATATTGGTAGTTGATGACTCCAAGACTGAATTGATGTTTCTGACCGATCTGCTGGTCAAGAATGG
CTTCACTGTCAAAACCGCAGAAAACGCGGAAGACGCCTTTCGCCGCCTGGCCGAGGACAAGCCGGAGCTGATTCTGATGG
ATGTGGTGATGCCGGGGCAAAACGGCTTCCAGCTGACGCGCGCCATTACCCGTGACCCCCTTTATTCGGACATCCCCATC
ATGATGTGCACCAGTAAAAATCAGGAAACCGATCGGGTGTGGGGCATGCGTCAGGGGGCTCGCGACTACATCACCAAGCC
TGTGGATGCTGATGAGTTGATGGCCAAAATCAAGGCCCTTGGCTGA

Upstream 100 bases:

>100_bases
GCATGGTGGGTTCACAGGACTACCTGACCAAGCCTTTTACCAAAGATCAGCTGCTGCAGACCGTTCAGGAACTCGGCAGT
GCAAAACAAGGAGTAGTTTG

Downstream 100 bases:

>100_bases
TCGACAGGCGTAAAACCAGAGCATGGCGAACAGACAAGCCCTCAGAGAGCTACAAACCCGGCTGGCCGACAGGTTGCAGG
TTGCGCGAACGCAGGGCGTT

Product: response regulator receiver domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MAIKKILVVDDSKTELMFLTDLLVKNGFTVKTAENAEDAFRRLAEDKPELILMDVVMPGQNGFQLTRAITRDPLYSDIPI
MMCTSKNQETDRVWGMRQGARDYITKPVDADELMAKIKALG

Sequences:

>Translated_121_residues
MAIKKILVVDDSKTELMFLTDLLVKNGFTVKTAENAEDAFRRLAEDKPELILMDVVMPGQNGFQLTRAITRDPLYSDIPI
MMCTSKNQETDRVWGMRQGARDYITKPVDADELMAKIKALG
>Mature_120_residues
AIKKILVVDDSKTELMFLTDLLVKNGFTVKTAENAEDAFRRLAEDKPELILMDVVMPGQNGFQLTRAITRDPLYSDIPIM
MCTSKNQETDRVWGMRQGARDYITKPVDADELMAKIKALG

Specific function: May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=117, Percent_Identity=41.025641025641, Blast_Score=97, Evalue=4e-22,
Organism=Escherichia coli, GI1789809, Length=116, Percent_Identity=37.9310344827586, Blast_Score=85, Evalue=1e-18,
Organism=Escherichia coli, GI1788394, Length=116, Percent_Identity=35.3448275862069, Blast_Score=80, Evalue=6e-17,
Organism=Escherichia coli, GI1787229, Length=117, Percent_Identity=29.9145299145299, Blast_Score=68, Evalue=2e-13,
Organism=Escherichia coli, GI87082012, Length=115, Percent_Identity=27.8260869565217, Blast_Score=67, Evalue=2e-13,
Organism=Escherichia coli, GI1786784, Length=116, Percent_Identity=31.0344827586207, Blast_Score=66, Evalue=5e-13,
Organism=Escherichia coli, GI1786911, Length=113, Percent_Identity=28.3185840707965, Blast_Score=66, Evalue=7e-13,
Organism=Escherichia coli, GI1790863, Length=120, Percent_Identity=30, Blast_Score=66, Evalue=8e-13,
Organism=Escherichia coli, GI2367329, Length=118, Percent_Identity=37.2881355932203, Blast_Score=65, Evalue=1e-12,
Organism=Escherichia coli, GI1790860, Length=120, Percent_Identity=27.5, Blast_Score=65, Evalue=1e-12,
Organism=Escherichia coli, GI1790299, Length=114, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=2e-12,
Organism=Escherichia coli, GI1788550, Length=112, Percent_Identity=31.25, Blast_Score=63, Evalue=6e-12,
Organism=Escherichia coli, GI1787375, Length=116, Percent_Identity=31.0344827586207, Blast_Score=63, Evalue=6e-12,
Organism=Escherichia coli, GI1788191, Length=114, Percent_Identity=31.5789473684211, Blast_Score=60, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 13667; Mature: 13536

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKKILVVDDSKTELMFLTDLLVKNGFTVKTAENAEDAFRRLAEDKPELILMDVVMPGQ
CCCEEEEEEECCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCEEEEEEEECCC
NGFQLTRAITRDPLYSDIPIMMCTSKNQETDRVWGMRQGARDYITKPVDADELMAKIKAL
CCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHC
G
C
>Mature Secondary Structure 
AIKKILVVDDSKTELMFLTDLLVKNGFTVKTAENAEDAFRRLAEDKPELILMDVVMPGQ
CCEEEEEEECCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCEEEEEEEECCC
NGFQLTRAITRDPLYSDIPIMMCTSKNQETDRVWGMRQGARDYITKPVDADELMAKIKAL
CCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7908398; 10984043 [H]