Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is aroG [H]
Identifier: 91786992
GI number: 91786992
Start: 1127692
End: 1128825
Strand: Direct
Name: aroG [H]
Synonym: Bpro_1094
Alternate gene names: 91786992
Gene position: 1127692-1128825 (Clockwise)
Preceding gene: 91786991
Following gene: 91786993
Centisome position: 21.69
GC content: 61.82
Gene sequence:
>1134_bases ATGAATGCCAAAGCCACCTCTGCCAGCCCCTCCAGCGACAGCTGGTATGCGAACGTCGAAAAAACCAGCCAGACCGACGA CGAACGCATCAAGGACATTACCGTGCTACCTCCCCCAGAGCATCTCATCCGCTTCTTCCCGATCCGCGGCACCGCTGTTG AATCGCTGATCACGCGGACGCGCAAGAGCATTCACAACATCATGGCGGGCAAGGATGACCGCCTGCTGGTGGTGATTGGT CCCTGCTCCATTCATGATCCGGCAGCGGCCCTGGAGTACGCGCGCCGGCTGATGGAGCAGCGCAAGAAATACGCGGGCAC GCTGGAGATCGTGATGCGCGTGTACTTCGAGAAGCCACGCACCACGGTCGGCTGGAAAGGGCTGATCAACGACCCCTACC TGGATGAAACCTTCCGCATCGACGAAGGCCTGCGCATCGCGCGCCAGTTGCTGATTGAAATCAACCGGCTGGGCTTGCCG GCGGGCAGCGAGTTCCTGGATGTCATTTCACCGCAGTACATCGGTGACCTGATCTCCTGGGGCGCGATTGGTGCGCGCAC CACGGAAAGCCAGGTGCACCGCGAACTGGCCTCCGGCCTGTCGGCGCCCATCGGTTTCAAGAACGGCACCGACGGCAACA TCCGCATTGCCACCGACGCCATCCAGGCGGCTGCGCGCGGCCACCACTTTTTGTCGGTGCACAAAAACGGCCAGGTCGCG ATTGTGCAAACCAACGGCAACAGGGACTGCCACGTGATTTTGCGTGGCGGCAAGACGCCCAATTACGACGCTGCCAGCGT GGCCGCGGCCTGCAAGGAGCTAGAGGCCTCCAAGTTGCCGGCTACCCTGATGGTCGACTGCAGCCACGCCAACAGCTCCA AGCAGCACGAGAAGCAGGTGGATGTGGCACGTGACATCGCAGGCCAGGTGGCCGGTGGCTCGCATCATGTGTTCGGCCTG ATGGTGGAAAGCCACCTGAATTCCGGTGCCCAAAAGTTCACGCCAGGCAAGGACGACGCGCAGGCGCTGGAGTATGGCAA AAGCATCACCGATGCCTGCCTGGGCTGGAACCATTCGCTTGAAGTGCTGGAGTCGCTGTCGGCCGCAGTGCTGGCTCGGC GGGCCAAAAAGTAG
Upstream 100 bases:
>100_bases AACCGCCGGACGCCCGGCGGTTTTTTTTTGCCGTTTTTATTTGAATATTTGAATGTTTGACTGATCCCGAATTGCCTGAA TTTTAAAAAGGAAGCCTGCG
Downstream 100 bases:
>100_bases GCCAGGCGGCCAAGAGTTGCGCCGGCACTTGCGGGTTTCCGCGAATTGCCGATGCACCTTGCGAAAGCGAACATGGGTCT TCCACCACCGGGAGCCGGCC
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MNAKATSASPSSDSWYANVEKTSQTDDERIKDITVLPPPEHLIRFFPIRGTAVESLITRTRKSIHNIMAGKDDRLLVVIG PCSIHDPAAALEYARRLMEQRKKYAGTLEIVMRVYFEKPRTTVGWKGLINDPYLDETFRIDEGLRIARQLLIEINRLGLP AGSEFLDVISPQYIGDLISWGAIGARTTESQVHRELASGLSAPIGFKNGTDGNIRIATDAIQAAARGHHFLSVHKNGQVA IVQTNGNRDCHVILRGGKTPNYDAASVAAACKELEASKLPATLMVDCSHANSSKQHEKQVDVARDIAGQVAGGSHHVFGL MVESHLNSGAQKFTPGKDDAQALEYGKSITDACLGWNHSLEVLESLSAAVLARRAKK
Sequences:
>Translated_377_residues MNAKATSASPSSDSWYANVEKTSQTDDERIKDITVLPPPEHLIRFFPIRGTAVESLITRTRKSIHNIMAGKDDRLLVVIG PCSIHDPAAALEYARRLMEQRKKYAGTLEIVMRVYFEKPRTTVGWKGLINDPYLDETFRIDEGLRIARQLLIEINRLGLP AGSEFLDVISPQYIGDLISWGAIGARTTESQVHRELASGLSAPIGFKNGTDGNIRIATDAIQAAARGHHFLSVHKNGQVA IVQTNGNRDCHVILRGGKTPNYDAASVAAACKELEASKLPATLMVDCSHANSSKQHEKQVDVARDIAGQVAGGSHHVFGL MVESHLNSGAQKFTPGKDDAQALEYGKSITDACLGWNHSLEVLESLSAAVLARRAKK >Mature_377_residues MNAKATSASPSSDSWYANVEKTSQTDDERIKDITVLPPPEHLIRFFPIRGTAVESLITRTRKSIHNIMAGKDDRLLVVIG PCSIHDPAAALEYARRLMEQRKKYAGTLEIVMRVYFEKPRTTVGWKGLINDPYLDETFRIDEGLRIARQLLIEINRLGLP AGSEFLDVISPQYIGDLISWGAIGARTTESQVHRELASGLSAPIGFKNGTDGNIRIATDAIQAAARGHHFLSVHKNGQVA IVQTNGNRDCHVILRGGKTPNYDAASVAAACKELEASKLPATLMVDCSHANSSKQHEKQVDVARDIAGQVAGGSHHVFGL MVESHLNSGAQKFTPGKDDAQALEYGKSITDACLGWNHSLEVLESLSAAVLARRAKK
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=351, Percent_Identity=61.2535612535613, Blast_Score=434, Evalue=1e-123, Organism=Escherichia coli, GI1787996, Length=351, Percent_Identity=53.5612535612536, Blast_Score=384, Evalue=1e-108, Organism=Escherichia coli, GI1788953, Length=350, Percent_Identity=52.2857142857143, Blast_Score=370, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6319726, Length=350, Percent_Identity=53.1428571428571, Blast_Score=352, Evalue=7e-98, Organism=Saccharomyces cerevisiae, GI6320240, Length=354, Percent_Identity=51.1299435028249, Blast_Score=350, Evalue=2e-97,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 41076; Mature: 41076
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAKATSASPSSDSWYANVEKTSQTDDERIKDITVLPPPEHLIRFFPIRGTAVESLITRT CCCCCCCCCCCCCCEEEECCCCCCCCHHHHCEEECCCCHHHHHEEECCCCHHHHHHHHHH RKSIHNIMAGKDDRLLVVIGPCSIHDPAAALEYARRLMEQRKKYAGTLEIVMRVYFEKPR HHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TTVGWKGLINDPYLDETFRIDEGLRIARQLLIEINRLGLPAGSEFLDVISPQYIGDLISW CCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHH GAIGARTTESQVHRELASGLSAPIGFKNGTDGNIRIATDAIQAAARGHHFLSVHKNGQVA CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHCCCEEEEEECCCCEE IVQTNGNRDCHVILRGGKTPNYDAASVAAACKELEASKLPATLMVDCSHANSSKQHEKQV EEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH DVARDIAGQVAGGSHHVFGLMVESHLNSGAQKFTPGKDDAQALEYGKSITDACLGWNHSL HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHCCHHHHHHHCCCCHH EVLESLSAAVLARRAKK HHHHHHHHHHHHHHCCC >Mature Secondary Structure MNAKATSASPSSDSWYANVEKTSQTDDERIKDITVLPPPEHLIRFFPIRGTAVESLITRT CCCCCCCCCCCCCCEEEECCCCCCCCHHHHCEEECCCCHHHHHEEECCCCHHHHHHHHHH RKSIHNIMAGKDDRLLVVIGPCSIHDPAAALEYARRLMEQRKKYAGTLEIVMRVYFEKPR HHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TTVGWKGLINDPYLDETFRIDEGLRIARQLLIEINRLGLPAGSEFLDVISPQYIGDLISW CCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHH GAIGARTTESQVHRELASGLSAPIGFKNGTDGNIRIATDAIQAAARGHHFLSVHKNGQVA CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHHHCCCEEEEEECCCCEE IVQTNGNRDCHVILRGGKTPNYDAASVAAACKELEASKLPATLMVDCSHANSSKQHEKQV EEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH DVARDIAGQVAGGSHHVFGLMVESHLNSGAQKFTPGKDDAQALEYGKSITDACLGWNHSL HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHCCHHHHHHHCCCCHH EVLESLSAAVLARRAKK HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]