Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786954

Identifier: 91786954

GI number: 91786954

Start: 1083332

End: 1084333

Strand: Direct

Name: 91786954

Synonym: Bpro_1056

Alternate gene names: NA

Gene position: 1083332-1084333 (Clockwise)

Preceding gene: 91786947

Following gene: 91786956

Centisome position: 20.83

GC content: 62.77

Gene sequence:

>1002_bases
ATGACGCATCCCCTTTTCAGGACCGCACTGGCGCTGGCAGCCACCACGCTGTGTGCCTGCAGTCTCAGCGCTTTTGCGCA
GACCGCCCCGGCTGGCGCGGGGCCAGCCTGGCCGTCCCGGCAGCCCATCAAATTCGTGGCCGTGTTTCCGCCTGGCGGCT
CGGTCGATCAGGTGGCGCGCATTTTGGCGCAGCCGCTGTCGCAGCAACTGGGCCAGAGCATCATTGTCGAAAACAAGGGC
GGCGCGTCGGGCTCCATCGGTACCGCGGCGGTTGCCGCAGCCCCTGCGGACGGCTACACCTTTGCGGTGGTGTTCGACAC
CCATGGCGTCAATCCCAGCCTGATTCCCGGCCTGCCGTTTGACACACGCAAGGATCTGGCGCCGGTCTCGCTGATCGGCA
CCTCGGCCATGGTGCTGGCGACTTTTTCAGCGTCCGAATACAAGACCTTTGCCGATGTGGTGGCAGCAGCCAAGGCCAAA
AAGAATGTGAACTACGGCAGCATCGGCTCGGGCAGCCTCGGCCACCTGGCGATGGCGCTGCTGAGCAAAAGCGGCAACAT
CGACTGGCAGCATGTGCCCTACAAAGGCGGCGGCCCGCTGATGTCCGATGCGGTGGCCGGCCATGTGCCCTTGTCCATTG
GCTCGGTGTTTGTGACCAAGCCGCACATTGACAGCGGCCGCCTGCGCCCGCTGGCCGTGACGACCAGCAAACGCTCGCCT
GATTTGCCCAATGTGCCAACCGTGGCCGAAAGCGGTTTTGCCGGTTTTGACGCGCCGGCCTGGTGGGCCATCCTGGCGCC
GGCCAAAACGCCGCCCGAAGTGCTCAAGCGCATGAACGAAGAAGTGAACAAGGCCTTGAAGAACCCCGAGATCGCGAAAA
AACTCAGTGCACAAGGCATTGACATCGTCGGCGGTTCGCCGGAGTCGGCCCGTGTCTTCATTGACAAGCAGATCGACATC
TGGGCCAAGGTTGTCAAGGACAATGGGATCAAAGCTGATTAA

Upstream 100 bases:

>100_bases
AATCGGAATTCGAATTGGTAGCGTGCTAAGTGTTAACCGCAATGGCGCGGCGGCGGGGCGATGCCGATACTGGCACCCAT
TCAATTTTCAGGCTTCAACC

Downstream 100 bases:

>100_bases
ATTGGCCCCCACGCTTGTCACTGCGTGTACTGCGCTGCCCCCCGAGGGGGCCGCTGCGCCTGCGGCCCGGCAAAGCCGGT
TCCGCGGCCCCGGCTTGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTHPLFRTALALAATTLCACSLSAFAQTAPAGAGPAWPSRQPIKFVAVFPPGGSVDQVARILAQPLSQQLGQSIIVENKG
GASGSIGTAAVAAAPADGYTFAVVFDTHGVNPSLIPGLPFDTRKDLAPVSLIGTSAMVLATFSASEYKTFADVVAAAKAK
KNVNYGSIGSGSLGHLAMALLSKSGNIDWQHVPYKGGGPLMSDAVAGHVPLSIGSVFVTKPHIDSGRLRPLAVTTSKRSP
DLPNVPTVAESGFAGFDAPAWWAILAPAKTPPEVLKRMNEEVNKALKNPEIAKKLSAQGIDIVGGSPESARVFIDKQIDI
WAKVVKDNGIKAD

Sequences:

>Translated_333_residues
MTHPLFRTALALAATTLCACSLSAFAQTAPAGAGPAWPSRQPIKFVAVFPPGGSVDQVARILAQPLSQQLGQSIIVENKG
GASGSIGTAAVAAAPADGYTFAVVFDTHGVNPSLIPGLPFDTRKDLAPVSLIGTSAMVLATFSASEYKTFADVVAAAKAK
KNVNYGSIGSGSLGHLAMALLSKSGNIDWQHVPYKGGGPLMSDAVAGHVPLSIGSVFVTKPHIDSGRLRPLAVTTSKRSP
DLPNVPTVAESGFAGFDAPAWWAILAPAKTPPEVLKRMNEEVNKALKNPEIAKKLSAQGIDIVGGSPESARVFIDKQIDI
WAKVVKDNGIKAD
>Mature_332_residues
THPLFRTALALAATTLCACSLSAFAQTAPAGAGPAWPSRQPIKFVAVFPPGGSVDQVARILAQPLSQQLGQSIIVENKGG
ASGSIGTAAVAAAPADGYTFAVVFDTHGVNPSLIPGLPFDTRKDLAPVSLIGTSAMVLATFSASEYKTFADVVAAAKAKK
NVNYGSIGSGSLGHLAMALLSKSGNIDWQHVPYKGGGPLMSDAVAGHVPLSIGSVFVTKPHIDSGRLRPLAVTTSKRSPD
LPNVPTVAESGFAGFDAPAWWAILAPAKTPPEVLKRMNEEVNKALKNPEIAKKLSAQGIDIVGGSPESARVFIDKQIDIW
AKVVKDNGIKAD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34436; Mature: 34305

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHPLFRTALALAATTLCACSLSAFAQTAPAGAGPAWPSRQPIKFVAVFPPGGSVDQVAR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHH
ILAQPLSQQLGQSIIVENKGGASGSIGTAAVAAAPADGYTFAVVFDTHGVNPSLIPGLPF
HHHHHHHHHCCCEEEEECCCCCCCCCCHHHEEECCCCCEEEEEEEECCCCCCCCCCCCCC
DTRKDLAPVSLIGTSAMVLATFSASEYKTFADVVAAAKAKKNVNYGSIGSGSLGHLAMAL
CCCCCCCCEEHHCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
LSKSGNIDWQHVPYKGGGPLMSDAVAGHVPLSIGSVFVTKPHIDSGRLRPLAVTTSKRSP
HHCCCCCCEEECCCCCCCCHHHHHHCCCCCEEECEEEEECCCCCCCCEEEEEEEECCCCC
DLPNVPTVAESGFAGFDAPAWWAILAPAKTPPEVLKRMNEEVNKALKNPEIAKKLSAQGI
CCCCCCCHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
DIVGGSPESARVFIDKQIDIWAKVVKDNGIKAD
EEECCCCCCEEEEEECHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
THPLFRTALALAATTLCACSLSAFAQTAPAGAGPAWPSRQPIKFVAVFPPGGSVDQVAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHH
ILAQPLSQQLGQSIIVENKGGASGSIGTAAVAAAPADGYTFAVVFDTHGVNPSLIPGLPF
HHHHHHHHHCCCEEEEECCCCCCCCCCHHHEEECCCCCEEEEEEEECCCCCCCCCCCCCC
DTRKDLAPVSLIGTSAMVLATFSASEYKTFADVVAAAKAKKNVNYGSIGSGSLGHLAMAL
CCCCCCCCEEHHCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
LSKSGNIDWQHVPYKGGGPLMSDAVAGHVPLSIGSVFVTKPHIDSGRLRPLAVTTSKRSP
HHCCCCCCEEECCCCCCCCHHHHHHCCCCCEEECEEEEECCCCCCCCEEEEEEEECCCCC
DLPNVPTVAESGFAGFDAPAWWAILAPAKTPPEVLKRMNEEVNKALKNPEIAKKLSAQGI
CCCCCCCHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
DIVGGSPESARVFIDKQIDIWAKVVKDNGIKAD
EEECCCCCCEEEEEECHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3299368 [H]