Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91786898
Identifier: 91786898
GI number: 91786898
Start: 1013601
End: 1014455
Strand: Direct
Name: 91786898
Synonym: Bpro_0998
Alternate gene names: NA
Gene position: 1013601-1014455 (Clockwise)
Preceding gene: 91786895
Following gene: 91786899
Centisome position: 19.49
GC content: 58.71
Gene sequence:
>855_bases ATGAGCACAAAAGAAACAGCACGACCCCGGCCCGATGATGCCGAGCCGTATTCCTTCGAGCCAGCGCCGCCGGTCAGCGT TGAAGAGCCGATCGCCTGGTATCTCCATCAGGCTGCTGCGGCCGCGGACAAGGCTGGCCTGAAAACGGTGCGGACCGAAG CCAGAACAGCCTTCATGCGCCAGTTTGGCCAGCGCTGCAAGGTGGCGCGGGGCGCAAGGGAGATCAATGACGTGGCGGCC ACTGTCGGCGTTCACCGCAACACCATCTGGAACATTGAGCGTGGTGACAGTCTGCCGGACGCGTTCGAGCTTGAGGTGCT TGCCAAGGAATACAACACGACCCCCGCGCATTTGCTGGGCGATGAGCGGCAAGGCAAGGCCCGGCTCACCGCCATGGTGC CTAACAGCGTGCATGCGGTGCAGGTGGACGCATTTATTTATGTGCCATTGTTCGACCTCAAATCTTCGGCCGGCAAGGAC GCATTCAATGACATCGAATCGGTGATTGCAATGCGTCCCTTTGACGCCCGCTTCATCAGATATGACCTGGGCATTGCCCA CAACGACATTGCCATGTCCATGGTGGTGGGTGTCTCCATGGAGCCGTGGCTGCACTCAAAAGATGCTGTCCTGACAGACT TGCAGGACCACGATGCCCTTACCGAGGGCATTCATGTTGTCAGGCTCGACGGCGCCTTGCTTGTGAAAAAACTGCAGAGA TTGCCCGGGAAGATACTGCGTGTGAGCAGCTACAACCAGGCCTATGAGCCGTTTGACATTCAGGGCCATGAGGACCCCGA CCGGGATTTTTCGGTGCTTGGCCGGGTACGTTGGGCCGGGGTGACTTTTAACTGA
Upstream 100 bases:
>100_bases TGCTGAAGAATTTGTTTCGATGCTGGTGTTTTTATGATTTTGCGGTGTTTTTTATGGGTTGTGTTTGCTTTTTTGTGTCT ATAGACACAGAATAGTGTTC
Downstream 100 bases:
>100_bases TGGCTGTGGGACGGAGGCAGCGCATTTGAACATTGTCAGCTGCGCGCAACGCTGTTTGTTGGCCACTGGAGCAGTAAAGG TCTGCCAATAGACATGCGAC
Product: putative phage repressor
Products: NA
Alternate protein names: Prophage; Transcriptional Regulator; S24 Family Peptidase; C Repressor; Transcriptional Regulator Repressor; Peptidase
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MSTKETARPRPDDAEPYSFEPAPPVSVEEPIAWYLHQAAAAADKAGLKTVRTEARTAFMRQFGQRCKVARGAREINDVAA TVGVHRNTIWNIERGDSLPDAFELEVLAKEYNTTPAHLLGDERQGKARLTAMVPNSVHAVQVDAFIYVPLFDLKSSAGKD AFNDIESVIAMRPFDARFIRYDLGIAHNDIAMSMVVGVSMEPWLHSKDAVLTDLQDHDALTEGIHVVRLDGALLVKKLQR LPGKILRVSSYNQAYEPFDIQGHEDPDRDFSVLGRVRWAGVTFN
Sequences:
>Translated_284_residues MSTKETARPRPDDAEPYSFEPAPPVSVEEPIAWYLHQAAAAADKAGLKTVRTEARTAFMRQFGQRCKVARGAREINDVAA TVGVHRNTIWNIERGDSLPDAFELEVLAKEYNTTPAHLLGDERQGKARLTAMVPNSVHAVQVDAFIYVPLFDLKSSAGKD AFNDIESVIAMRPFDARFIRYDLGIAHNDIAMSMVVGVSMEPWLHSKDAVLTDLQDHDALTEGIHVVRLDGALLVKKLQR LPGKILRVSSYNQAYEPFDIQGHEDPDRDFSVLGRVRWAGVTFN >Mature_283_residues STKETARPRPDDAEPYSFEPAPPVSVEEPIAWYLHQAAAAADKAGLKTVRTEARTAFMRQFGQRCKVARGAREINDVAAT VGVHRNTIWNIERGDSLPDAFELEVLAKEYNTTPAHLLGDERQGKARLTAMVPNSVHAVQVDAFIYVPLFDLKSSAGKDA FNDIESVIAMRPFDARFIRYDLGIAHNDIAMSMVVGVSMEPWLHSKDAVLTDLQDHDALTEGIHVVRLDGALLVKKLQRL PGKILRVSSYNQAYEPFDIQGHEDPDRDFSVLGRVRWAGVTFN
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31623; Mature: 31492
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKETARPRPDDAEPYSFEPAPPVSVEEPIAWYLHQAAAAADKAGLKTVRTEARTAFMR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFGQRCKVARGAREINDVAATVGVHRNTIWNIERGDSLPDAFELEVLAKEYNTTPAHLLG HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHCC DERQGKARLTAMVPNSVHAVQVDAFIYVPLFDLKSSAGKDAFNDIESVIAMRPFDARFIR CCCCCCEEEEEECCCCEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEE YDLGIAHNDIAMSMVVGVSMEPWLHSKDAVLTDLQDHDALTEGIHVVRLDGALLVKKLQR EECCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHCEEEEEECHHHHHHHHHH LPGKILRVSSYNQAYEPFDIQGHEDPDRDFSVLGRVRWAGVTFN CCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEEECC >Mature Secondary Structure STKETARPRPDDAEPYSFEPAPPVSVEEPIAWYLHQAAAAADKAGLKTVRTEARTAFMR CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFGQRCKVARGAREINDVAATVGVHRNTIWNIERGDSLPDAFELEVLAKEYNTTPAHLLG HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHCC DERQGKARLTAMVPNSVHAVQVDAFIYVPLFDLKSSAGKDAFNDIESVIAMRPFDARFIR CCCCCCEEEEEECCCCEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEE YDLGIAHNDIAMSMVVGVSMEPWLHSKDAVLTDLQDHDALTEGIHVVRLDGALLVKKLQR EECCCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHCEEEEEECHHHHHHHHHH LPGKILRVSSYNQAYEPFDIQGHEDPDRDFSVLGRVRWAGVTFN CCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA