Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786886

Identifier: 91786886

GI number: 91786886

Start: 1003320

End: 1004519

Strand: Direct

Name: 91786886

Synonym: Bpro_0986

Alternate gene names: NA

Gene position: 1003320-1004519 (Clockwise)

Preceding gene: 91786885

Following gene: 91786887

Centisome position: 19.29

GC content: 62.83

Gene sequence:

>1200_bases
ATGAGACAAGAGAACATGACCACGACACCCACGACCTCCTTTCGCCGCACCGCGCTCGCCGCCCTGGCGGGTGTGGCACT
TGCAGGCGTCAGCCAGCTCGCCGCAGCCGCCACCATCGGCATCATGGCGCCCCTGTCCGGCCCGCAGGCCATCGTCGGCC
AGGACCAGGTCGACGGGTTCATGCTGGCGGTCGGGCAACTGGGCGGCAAGCTCGGCGGTCAACCCGCCACCATACTGAAG
GAAGACGACCAGCTCAAGCCGGAAATCGGCAGCCAGATCGTGCGCAAGTTCATCGGCAAGGACAAGGTCGATGCCATTGT
GGGCCTGAGTTTTTCCAACGTGCTGATGGCGAGTCTGCCGCGCATCGCCGAGTCGGGCACGGTGGCCATCGCCACCAATG
CCGGCCCATCGCCGTTGGCCGGCGCGGGTTGCAAGGCCAATGTATTTTCTGCCGCCTGGCAGAACGACGGCGCCGCCGAA
GCCATGGGCAAGTTTGCCCAGGATAAGGGCCTGAAAAAAGTCTACCTGATGGCGCCCAACTACCAGGCCGGCAAGGACAT
GATGACTGGCTTCAAGCGCTACTTCAAAGGCCAGATTGTGGATGAGGTTTACACACAGGTGAACCAGCCCGACTACTCGG
CCGAACTGGCGCAACTGCAGTCAGCCAAGCCCGACGCGGTGTTTGTGTTCTACCCTGGCGGCATGGGCGTCAACTTCATC
AAGCAGATGAGCCAGGCTGGCCTGATGGCCAAGGTGCCGCTGTATTCCGTCTTCACTGTCGATGGCACGACCTTGCCGGG
CCTGCATGATGCGGCGGTGGGCAGCGTCAGCGGTGCGATGTGGGACGCGGCGCTCGACACGCCGGAGAACAGGAAATTCG
TCGCCGACTTCGAGCGCAAGTACAAACGTACTCCCAGCGAATACGCGGCGACGGCCTACGACGCGGCCAATATTCTGAAC
ATCGCGCTCGGCAAGGCCAAGGCCGGCGACGCCAAGGCGCTTGCCGTCGCGGTCAAGGCGGCCGGCAGTGAGTTCAAGTC
GGTGCGAGGCCCGTTTGCGTTCAACAATAACAACCTGCCGGTGCAGAACTACTATGCGTTCGAAACCATCAAGAGCGGCA
GCAGCGTCGTCGGAAAGCTCGTCGCAACGCCGCTGACCCGGCAGACCGATGCCTACCACGCACAATGCGCGCTGAAGTGA

Upstream 100 bases:

>100_bases
TTCGCAGCTACCCCGTGCGCATCGAAGGCGGGCGCGTATTTGTGCAGATGTCTGACTGACCCGCAGCTGCCCCATCCTTC
CCTCACCCTATCAACACAAC

Downstream 100 bases:

>100_bases
CACCATGAACAGCACGCTTGTTTTCGCGCAGCTGCTCAACGGCCTGCAATACGGCGTCCTGCTGTTTCTGCTGGCTGCAG
GCCTGACGCTGGTCTTCGGC

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MRQENMTTTPTTSFRRTALAALAGVALAGVSQLAAAATIGIMAPLSGPQAIVGQDQVDGFMLAVGQLGGKLGGQPATILK
EDDQLKPEIGSQIVRKFIGKDKVDAIVGLSFSNVLMASLPRIAESGTVAIATNAGPSPLAGAGCKANVFSAAWQNDGAAE
AMGKFAQDKGLKKVYLMAPNYQAGKDMMTGFKRYFKGQIVDEVYTQVNQPDYSAELAQLQSAKPDAVFVFYPGGMGVNFI
KQMSQAGLMAKVPLYSVFTVDGTTLPGLHDAAVGSVSGAMWDAALDTPENRKFVADFERKYKRTPSEYAATAYDAANILN
IALGKAKAGDAKALAVAVKAAGSEFKSVRGPFAFNNNNLPVQNYYAFETIKSGSSVVGKLVATPLTRQTDAYHAQCALK

Sequences:

>Translated_399_residues
MRQENMTTTPTTSFRRTALAALAGVALAGVSQLAAAATIGIMAPLSGPQAIVGQDQVDGFMLAVGQLGGKLGGQPATILK
EDDQLKPEIGSQIVRKFIGKDKVDAIVGLSFSNVLMASLPRIAESGTVAIATNAGPSPLAGAGCKANVFSAAWQNDGAAE
AMGKFAQDKGLKKVYLMAPNYQAGKDMMTGFKRYFKGQIVDEVYTQVNQPDYSAELAQLQSAKPDAVFVFYPGGMGVNFI
KQMSQAGLMAKVPLYSVFTVDGTTLPGLHDAAVGSVSGAMWDAALDTPENRKFVADFERKYKRTPSEYAATAYDAANILN
IALGKAKAGDAKALAVAVKAAGSEFKSVRGPFAFNNNNLPVQNYYAFETIKSGSSVVGKLVATPLTRQTDAYHAQCALK
>Mature_399_residues
MRQENMTTTPTTSFRRTALAALAGVALAGVSQLAAAATIGIMAPLSGPQAIVGQDQVDGFMLAVGQLGGKLGGQPATILK
EDDQLKPEIGSQIVRKFIGKDKVDAIVGLSFSNVLMASLPRIAESGTVAIATNAGPSPLAGAGCKANVFSAAWQNDGAAE
AMGKFAQDKGLKKVYLMAPNYQAGKDMMTGFKRYFKGQIVDEVYTQVNQPDYSAELAQLQSAKPDAVFVFYPGGMGVNFI
KQMSQAGLMAKVPLYSVFTVDGTTLPGLHDAAVGSVSGAMWDAALDTPENRKFVADFERKYKRTPSEYAATAYDAANILN
IALGKAKAGDAKALAVAVKAAGSEFKSVRGPFAFNNNNLPVQNYYAFETIKSGSSVVGKLVATPLTRQTDAYHAQCALK

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 41946; Mature: 41946

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQENMTTTPTTSFRRTALAALAGVALAGVSQLAAAATIGIMAPLSGPQAIVGQDQVDGF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHH
MLAVGQLGGKLGGQPATILKEDDQLKPEIGSQIVRKFIGKDKVDAIVGLSFSNVLMASLP
HHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCHHHHEECCCHHHHHHHHHH
RIAESGTVAIATNAGPSPLAGAGCKANVFSAAWQNDGAAEAMGKFAQDKGLKKVYLMAPN
HHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCC
YQAGKDMMTGFKRYFKGQIVDEVYTQVNQPDYSAELAQLQSAKPDAVFVFYPGGMGVNFI
CCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHH
KQMSQAGLMAKVPLYSVFTVDGTTLPGLHDAAVGSVSGAMWDAALDTPENRKFVADFERK
HHHHHCCCEEECCEEEEEEECCCCCCCCHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHH
YKRTPSEYAATAYDAANILNIALGKAKAGDAKALAVAVKAAGSEFKSVRGPFAFNNNNLP
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHCCCCEECCCCCC
VQNYYAFETIKSGSSVVGKLVATPLTRQTDAYHAQCALK
CCEEEEHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MRQENMTTTPTTSFRRTALAALAGVALAGVSQLAAAATIGIMAPLSGPQAIVGQDQVDGF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHH
MLAVGQLGGKLGGQPATILKEDDQLKPEIGSQIVRKFIGKDKVDAIVGLSFSNVLMASLP
HHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCHHHHEECCCHHHHHHHHHH
RIAESGTVAIATNAGPSPLAGAGCKANVFSAAWQNDGAAEAMGKFAQDKGLKKVYLMAPN
HHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCC
YQAGKDMMTGFKRYFKGQIVDEVYTQVNQPDYSAELAQLQSAKPDAVFVFYPGGMGVNFI
CCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHH
KQMSQAGLMAKVPLYSVFTVDGTTLPGLHDAAVGSVSGAMWDAALDTPENRKFVADFERK
HHHHHCCCEEECCEEEEEEECCCCCCCCHHHHHHHHCHHHHHHHCCCCCCCCHHHHHHHH
YKRTPSEYAATAYDAANILNIALGKAKAGDAKALAVAVKAAGSEFKSVRGPFAFNNNNLP
HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHCCCCEECCCCCC
VQNYYAFETIKSGSSVVGKLVATPLTRQTDAYHAQCALK
CCEEEEHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA