Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91786884
Identifier: 91786884
GI number: 91786884
Start: 1002466
End: 1002954
Strand: Direct
Name: 91786884
Synonym: Bpro_0984
Alternate gene names: NA
Gene position: 1002466-1002954 (Clockwise)
Preceding gene: 91786883
Following gene: 91786885
Centisome position: 19.28
GC content: 57.87
Gene sequence:
>489_bases ATGAGCACCGCTGTCGACATCAATTTTGAAGACTACCTGCAGGTCGCGCAGCTGTATGCCGATTACGCTCGGGCGGTCGA TTCGGGCGACTGGGATTTGTGGCCCGAGTTCTTCACCGAAAACTGCACCTACAAGCTGATCCCGCGTGAAAACCATGAAC GCGGCTTTCCGCTGGCCACCCTGTTTTTTGAAAGCAAGGGCATGCTGAAAGACCGCGTCTATGGCATCCGCGAGACGCTG TTCCATGACCCTTACTACCAGCGCCACGTCGTCGGCGCGCCGCTGATCCACAAGGCCGACAAGAACCGTTTCGAGGCCGA GGCCAACTACGCCGTTTTCCGCACCAAGCTGTCGCAGGAGTCGACCGTCTTCAACGTCGGCCGCTACATCGACGTGATCG AGCGCACGCCCGAAGGCCTGAAGTTCGCGTCACGCCTCTGCGTGTACGACAGCGAAATGATCCCGAATTCCATCATCTAC CCGATTTAA
Upstream 100 bases:
>100_bases ATGTACCAATACTGGCGCGAAGTGATGGAGGCTGAGGCATGAGCGCCGCCCGGCCGCCCGAAGGCGTTCGCACCGCAGTG CACAGCACGGAGGTTATCTA
Downstream 100 bases:
>100_bases ATCATGAGCGATTCCAACTGGCTTGACGCCACCGAAGAAGACGGCGTGCCCGAAGACGATGTGATCGGCCTGCTGGTCGG CGGCCGGGACATTGCCTTCT
Product: aromatic-ring-hydroxylating dioxygenase subunit beta
Products: NA
Alternate protein names: Anthranilate Dioxygenase Small Subunit; Ring Hydroxylating Subunit Beta Family; Salicylate-5-Hydroxylase Small Oxygenase Component; Ortho-Halobenzoate-12-Dioxygenase Beta Subunit; Ring Hydroxylating Beta Subunit; Aromatic-Ring-Hydroxylating Dioxygenase Subunit Beta; Ring Dioxygenase Beta Subunit; Ring Hydroxylating Subunit Beta; Oxygenase; Ring-Hydroxylating Dioxygenase Beta Subunit; Aromatic-Ring Hydroxylating Dioxygenase Beta-Subunit; Small Subunit Aromatic Oxygenase; Small Subunit Of Anthranilate Dioxygenase; Dioxygenase System Beta Subunit; Oxygenase Small Subunit Of Salicylate 5-Hydroxylase; Oxygenase Small Subunit Of Terephthalate 1 2-Dioxygenase; Aromatic Ring Dioxygenase Beta Subunit; Salicylate 5-Hydroxylase; Dioxygenase; Aromatic Dioxygenase Beta Subunit; Ring Hydroxylating Beta Subunit Family; Terephthalate 12-Dioxygenase Small Subunit
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSTAVDINFEDYLQVAQLYADYARAVDSGDWDLWPEFFTENCTYKLIPRENHERGFPLATLFFESKGMLKDRVYGIRETL FHDPYYQRHVVGAPLIHKADKNRFEAEANYAVFRTKLSQESTVFNVGRYIDVIERTPEGLKFASRLCVYDSEMIPNSIIY PI
Sequences:
>Translated_162_residues MSTAVDINFEDYLQVAQLYADYARAVDSGDWDLWPEFFTENCTYKLIPRENHERGFPLATLFFESKGMLKDRVYGIRETL FHDPYYQRHVVGAPLIHKADKNRFEAEANYAVFRTKLSQESTVFNVGRYIDVIERTPEGLKFASRLCVYDSEMIPNSIIY PI >Mature_161_residues STAVDINFEDYLQVAQLYADYARAVDSGDWDLWPEFFTENCTYKLIPRENHERGFPLATLFFESKGMLKDRVYGIRETLF HDPYYQRHVVGAPLIHKADKNRFEAEANYAVFRTKLSQESTVFNVGRYIDVIERTPEGLKFASRLCVYDSEMIPNSIIYP I
Specific function: Unknown
COG id: COG5517
COG function: function code Q; Small subunit of phenylpropionate dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.14.1.-
Molecular weight: Translated: 18939; Mature: 18807
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAVDINFEDYLQVAQLYADYARAVDSGDWDLWPEFFTENCTYKLIPRENHERGFPLAT CCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCEEE LFFESKGMLKDRVYGIRETLFHDPYYQRHVVGAPLIHKADKNRFEAEANYAVFRTKLSQE EEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHCCCCCCCCCCCHHEEEECCCCC STVFNVGRYIDVIERTPEGLKFASRLCVYDSEMIPNSIIYPI CHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure STAVDINFEDYLQVAQLYADYARAVDSGDWDLWPEFFTENCTYKLIPRENHERGFPLAT CCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCEEE LFFESKGMLKDRVYGIRETLFHDPYYQRHVVGAPLIHKADKNRFEAEANYAVFRTKLSQE EEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHCCCCCCCCCCCHHEEEECCCCC STVFNVGRYIDVIERTPEGLKFASRLCVYDSEMIPNSIIYPI CHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA