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The map label for this gene is ndoR [H]

Identifier: 91786880

GI number: 91786880

Start: 998284

End: 999267

Strand: Direct

Name: ndoR [H]

Synonym: Bpro_0980

Alternate gene names: 91786880

Gene position: 998284-999267 (Clockwise)

Preceding gene: 91786878

Following gene: 91786881

Centisome position: 19.2

GC content: 63.62

Gene sequence:

>984_bases
ATGGAAATTTTTGTACGTCCCCTCCAGCGCACGCTGAGCGTTACTGCCGGCGTCAATTTGCTGGACGCCCTGCGCGCGAA
CGACGTGCCGGTGTCGTACAGCTGCATGGCCGGGCGTTGCGGCACCTGCCGCTGCAAGGTTGTCGAGGGGCATGTGCTCG
ATTCGGGCCGGGAAGCGCAGCGCCCGCTGGTGACTGAAGACCGTTATGTGCTGGCGTGCCAGACCTTTCTGACTGAATCC
TGCACTGTCGAAATCCCCGAACCTGACGAGGTCGTTGTCCATACGGCAAAAATCGTCAAAGCCACTGTTGTGGCGGTAGA
AGACCAGACCCACGACATCAAGCGAATCCGGCTGAAGGCCGCCAAGCCACTCGGGTTTTCACCTGGCCAGTATGCGCAGC
TTCAGTTCACGCCTGACCACATCCGGCCCTATTCGATGGCCGGCCTGTGTGCGGAGGATGAGCTGGAGTTCCATGTGCGC
CTGGTCCCCGATGGCCGGGTCACCGGCTACATCGCCAACACGCTGAAGGTCGGCGACGCGGTGCGCGTCAGCGGCCCGCT
GGGCTCGGCCTACCTGCGCCGCAAGCATGAGGGCCCGATGCTGTGCGTGGCCGGCGGCACAGGCCTCGCGCCTATCCTGT
CGATCATCCGCGGCGTCATTGCCGAAGGCATGCGCAACAGCATCCATCTTTATTTTGGTGTTCGCTCGGAACGCGACATC
TACGGCCGCGAATGGCTGGCAGAGCTTCAGCGCCAACATCCGCAACTGCATGTGCACGTCGTGGTCACGTCCGGCCAGGT
GCCCGGGTGCCGCACCGGCCTGGTCACAGAAGCCATCGCCCAGGACTGGTCCAGCCTCGAAGGCGTTCGCGCCTACCTCT
GCGGCGCGCCGCCCATGGTGGAGGCCACGACCTTGCTGGTGCGCCAGATGGGCGTGCTCGCCGAACAAATTTATGCCGAC
GCGTTTTACGCCAGCGGCACTTGA

Upstream 100 bases:

>100_bases
TTGACTGATTATGCACTGCGGCCGAAGATCACCGCCATAGCAGCCACGGTTTCCGCCGTCGTCGCAAAAAGCAATTTCTC
CACGAGACAAGACCCAACTG

Downstream 100 bases:

>100_bases
AAAATCAACAGGAATAGCCATGAACGCCAGAAATCTCGACCTCGAATCCCAGCTGAGCCGCAAAGCCTATTACGACCGCA
TTGGCGCCGACAACATGACG

Product: oxidoreductase FAD-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MEIFVRPLQRTLSVTAGVNLLDALRANDVPVSYSCMAGRCGTCRCKVVEGHVLDSGREAQRPLVTEDRYVLACQTFLTES
CTVEIPEPDEVVVHTAKIVKATVVAVEDQTHDIKRIRLKAAKPLGFSPGQYAQLQFTPDHIRPYSMAGLCAEDELEFHVR
LVPDGRVTGYIANTLKVGDAVRVSGPLGSAYLRRKHEGPMLCVAGGTGLAPILSIIRGVIAEGMRNSIHLYFGVRSERDI
YGREWLAELQRQHPQLHVHVVVTSGQVPGCRTGLVTEAIAQDWSSLEGVRAYLCGAPPMVEATTLLVRQMGVLAEQIYAD
AFYASGT

Sequences:

>Translated_327_residues
MEIFVRPLQRTLSVTAGVNLLDALRANDVPVSYSCMAGRCGTCRCKVVEGHVLDSGREAQRPLVTEDRYVLACQTFLTES
CTVEIPEPDEVVVHTAKIVKATVVAVEDQTHDIKRIRLKAAKPLGFSPGQYAQLQFTPDHIRPYSMAGLCAEDELEFHVR
LVPDGRVTGYIANTLKVGDAVRVSGPLGSAYLRRKHEGPMLCVAGGTGLAPILSIIRGVIAEGMRNSIHLYFGVRSERDI
YGREWLAELQRQHPQLHVHVVVTSGQVPGCRTGLVTEAIAQDWSSLEGVRAYLCGAPPMVEATTLLVRQMGVLAEQIYAD
AFYASGT
>Mature_327_residues
MEIFVRPLQRTLSVTAGVNLLDALRANDVPVSYSCMAGRCGTCRCKVVEGHVLDSGREAQRPLVTEDRYVLACQTFLTES
CTVEIPEPDEVVVHTAKIVKATVVAVEDQTHDIKRIRLKAAKPLGFSPGQYAQLQFTPDHIRPYSMAGLCAEDELEFHVR
LVPDGRVTGYIANTLKVGDAVRVSGPLGSAYLRRKHEGPMLCVAGGTGLAPILSIIRGVIAEGMRNSIHLYFGVRSERDI
YGREWLAELQRQHPQLHVHVVVTSGQVPGCRTGLVTEAIAQDWSSLEGVRAYLCGAPPMVEATTLLVRQMGVLAEQIYAD
AFYASGT

Specific function: Component of naphthalene dioxygenase (NDO) multicomponent enzyme system which catalyzes the incorporation of both atoms of molecular oxygen into naphthalene to form cis- naphthalene dihydrodiol. Transfers electrons from ferredoxin (ndoA) to NADH [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI2367314, Length=223, Percent_Identity=29.1479820627803, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787658, Length=245, Percent_Identity=25.3061224489796, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 35710; Mature: 35710

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIFVRPLQRTLSVTAGVNLLDALRANDVPVSYSCMAGRCGTCRCKVVEGHVLDSGREAQ
CCEEHHHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHCCCCCCEEEEEEECEEECCCCHHC
RPLVTEDRYVLACQTFLTESCTVEIPEPDEVVVHTAKIVKATVVAVEDQTHDIKRIRLKA
CCCCCCCCEEEEEEHHHCCCCEEECCCCCCEEEEHHHHEEEEEEEEECCCCCHHHHEEEE
AKPLGFSPGQYAQLQFTPDHIRPYSMAGLCAEDELEFHVRLVPDGRVTGYIANTLKVGDA
CCCCCCCCCCEEEEEECHHHCCCCHHCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCE
VRVSGPLGSAYLRRKHEGPMLCVAGGTGLAPILSIIRGVIAEGMRNSIHLYFGVRSERDI
EEECCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
YGREWLAELQRQHPQLHVHVVVTSGQVPGCRTGLVTEAIAQDWSSLEGVRAYLCGAPPMV
HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EATTLLVRQMGVLAEQIYADAFYASGT
HHHHHHHHHHHHHHHHHHHHHEECCCC
>Mature Secondary Structure
MEIFVRPLQRTLSVTAGVNLLDALRANDVPVSYSCMAGRCGTCRCKVVEGHVLDSGREAQ
CCEEHHHHHHHHHHHCCCHHHHHHHCCCCCEEEHHHCCCCCCEEEEEEECEEECCCCHHC
RPLVTEDRYVLACQTFLTESCTVEIPEPDEVVVHTAKIVKATVVAVEDQTHDIKRIRLKA
CCCCCCCCEEEEEEHHHCCCCEEECCCCCCEEEEHHHHEEEEEEEEECCCCCHHHHEEEE
AKPLGFSPGQYAQLQFTPDHIRPYSMAGLCAEDELEFHVRLVPDGRVTGYIANTLKVGDA
CCCCCCCCCCEEEEEECHHHCCCCHHCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCE
VRVSGPLGSAYLRRKHEGPMLCVAGGTGLAPILSIIRGVIAEGMRNSIHLYFGVRSERDI
EEECCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
YGREWLAELQRQHPQLHVHVVVTSGQVPGCRTGLVTEAIAQDWSSLEGVRAYLCGAPPMV
HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EATTLLVRQMGVLAEQIYADAFYASGT
HHHHHHHHHHHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8486285; 8787402; 2294092 [H]