Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91786813
Identifier: 91786813
GI number: 91786813
Start: 928672
End: 929523
Strand: Direct
Name: 91786813
Synonym: Bpro_0911
Alternate gene names: NA
Gene position: 928672-929523 (Clockwise)
Preceding gene: 91786812
Following gene: 91786814
Centisome position: 17.86
GC content: 61.62
Gene sequence:
>852_bases ATGAGCCGCCGGGCCGCTCCTAAGGCGAATACCGCAGCGCGCAGCGCGGAGGTTGCCCCAATGAACGCCGGGCGATCCAA CATGCCGACGGAGCCTGTGAACCGGCACATCAAGCTGCTGCGGTACACGCCTCGATCGGGAGGCCCCAGCCGTGTATTCG GTGCGGTCTGGAAACGCCGCGATGAAGTTCACTGGGCGTCGCCGATTGTGCAAAGAATCGATGACGTGTTTGACCCGCAG CCCTTCGTTGCCCGTTTCCCCGACGCTGCGTATGAGTTTGATCACTTCGTCGCAGCTGTCGCATGGCTGGAGTCGGTCTG CTACGCGGCGCGAGAACCATTTGAAGTTGCTCGTGCCTGCGAGACAGAAGCTGATCTGGGGTTGAGCTGTATTCGGTATC AAGGCCCGGGTCGCGGAGAAGATCTCGCCAGCCTGCTCGGAGGAGAGGGGGGCCGGGCGCAGTTGCTGGACGTCGAGTTG CTCAGGACTGCCGTCAGCCTGACGCTGGAGCACCTCGTCAAAGAGCATGCAGTGCTCAAGGGTCTTCCGCTGGAACTGAT ATCGCAGGGCACCGATGAATGCGCGCGCCTTCACCTTCCTGGTGATCAAATCGTACGCATCTACTTTGATCGCGACACCC CGCCGGGTGACGTGATGCCGAAATTGCTGGTTGAGAGCGATCGATTGGACCGTGAGGCCCCCGAATCGGAGGTATCGTTT CTGGTCTTTGCCCAACTCAAGACTGCACTGCCCATCACGCCGACCTCCCGAGTGCTCGCGACTGGCATGAGGCTGCCGCA CATCGCAAACGGCCTGGTTCGGCTGGTCTGGGCTACACCGCGGTCGCCATGA
Upstream 100 bases:
>100_bases CGGCAACAGTGCCCGTGGCTGCCTTGCTCATGGTATTGGCCGCACCTCCGCTCCTGAGAGATTTCTGGTTACTCGGCAAG AAAATCCAAAGGGAAATGCC
Downstream 100 bases:
>100_bases AACTGCCCGGCAAACCTCGTGGAGAAATGCAGCTGGGTAATCCCGGGTGCACCTCGCCTCAAAACGAAGCCGTGAACTTT TCCTGCAGGAGCCGTGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSRRAAPKANTAARSAEVAPMNAGRSNMPTEPVNRHIKLLRYTPRSGGPSRVFGAVWKRRDEVHWASPIVQRIDDVFDPQ PFVARFPDAAYEFDHFVAAVAWLESVCYAAREPFEVARACETEADLGLSCIRYQGPGRGEDLASLLGGEGGRAQLLDVEL LRTAVSLTLEHLVKEHAVLKGLPLELISQGTDECARLHLPGDQIVRIYFDRDTPPGDVMPKLLVESDRLDREAPESEVSF LVFAQLKTALPITPTSRVLATGMRLPHIANGLVRLVWATPRSP
Sequences:
>Translated_283_residues MSRRAAPKANTAARSAEVAPMNAGRSNMPTEPVNRHIKLLRYTPRSGGPSRVFGAVWKRRDEVHWASPIVQRIDDVFDPQ PFVARFPDAAYEFDHFVAAVAWLESVCYAAREPFEVARACETEADLGLSCIRYQGPGRGEDLASLLGGEGGRAQLLDVEL LRTAVSLTLEHLVKEHAVLKGLPLELISQGTDECARLHLPGDQIVRIYFDRDTPPGDVMPKLLVESDRLDREAPESEVSF LVFAQLKTALPITPTSRVLATGMRLPHIANGLVRLVWATPRSP >Mature_282_residues SRRAAPKANTAARSAEVAPMNAGRSNMPTEPVNRHIKLLRYTPRSGGPSRVFGAVWKRRDEVHWASPIVQRIDDVFDPQP FVARFPDAAYEFDHFVAAVAWLESVCYAAREPFEVARACETEADLGLSCIRYQGPGRGEDLASLLGGEGGRAQLLDVELL RTAVSLTLEHLVKEHAVLKGLPLELISQGTDECARLHLPGDQIVRIYFDRDTPPGDVMPKLLVESDRLDREAPESEVSFL VFAQLKTALPITPTSRVLATGMRLPHIANGLVRLVWATPRSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31233; Mature: 31102
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRAAPKANTAARSAEVAPMNAGRSNMPTEPVNRHIKLLRYTPRSGGPSRVFGAVWKRR CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHC DEVHWASPIVQRIDDVFDPQPFVARFPDAAYEFDHFVAAVAWLESVCYAAREPFEVARAC CCCHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ETEADLGLSCIRYQGPGRGEDLASLLGGEGGRAQLLDVELLRTAVSLTLEHLVKEHAVLK CCHHHCCCEEEEECCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHC GLPLELISQGTDECARLHLPGDQIVRIYFDRDTPPGDVMPKLLVESDRLDREAPESEVSF CCCHHHHHCCCHHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH LVFAQLKTALPITPTSRVLATGMRLPHIANGLVRLVWATPRSP HHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHEEEEECCCCCC >Mature Secondary Structure SRRAAPKANTAARSAEVAPMNAGRSNMPTEPVNRHIKLLRYTPRSGGPSRVFGAVWKRR CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHC DEVHWASPIVQRIDDVFDPQPFVARFPDAAYEFDHFVAAVAWLESVCYAAREPFEVARAC CCCHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH ETEADLGLSCIRYQGPGRGEDLASLLGGEGGRAQLLDVELLRTAVSLTLEHLVKEHAVLK CCHHHCCCEEEEECCCCCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHC GLPLELISQGTDECARLHLPGDQIVRIYFDRDTPPGDVMPKLLVESDRLDREAPESEVSF CCCHHHHHCCCHHHHEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH LVFAQLKTALPITPTSRVLATGMRLPHIANGLVRLVWATPRSP HHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA