Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yibN [C]

Identifier: 91786789

GI number: 91786789

Start: 908593

End: 909003

Strand: Direct

Name: yibN [C]

Synonym: Bpro_0887

Alternate gene names: 91786789

Gene position: 908593-909003 (Clockwise)

Preceding gene: 91786785

Following gene: 91786790

Centisome position: 17.47

GC content: 61.31

Gene sequence:

>411_bases
GTGAAATTTCTGATCGATAACTGGATGCTGATTTCGGTAGCGCTCGCCTCGGGCGGCATGCTGATCTGGCCCATGATTTC
CGGTGTCATGAACGCCGGCGCGCTAAGCGCCAGCGGCGCCGTACAGCTGATCAACCGCGAAAAAGCCGTGGTCGTAGACG
TGAGCGAGGCGGACGAGTTTGCGGCCGGCCATGTCGGTGGCGCCAAGAACGTGCCTTTCGGCGAACTGGAAAGCAAGCTG
CCTGGCGTTGTGAAAAACAAGGCCTTGCCGCTGATCCTGGTGTGTTCCAGCGGTGCGCGCGCCGGCCGCGCCGTGGCCGT
GGCCAAAAAGCTCGGTTACGAGCATGCCCAATCGCTGGGCGGCGGGCTGAAAGCCTGGAAAGAAGCTAACCTTCCGCTTG
AAAAGGCGTGA

Upstream 100 bases:

>100_bases
AAGGGTGCAGCAGGCAGGGGTAAAAGAGGCAGCCGGTAGGCAATTTCCGGCCTCCATTCTAAAATCACTGGTTTGGTGAA
AAACACACAAAGGGTAGCAA

Downstream 100 bases:

>100_bases
GAGGGCGGGGGGCCGCTCATTGCCTTGCCGCCGGGACGCGGCCCTGGACGGGCTGTTTCCGGCTTCCACCCATTTCCCTG
CAGCGGCGCCTTGAAGGCGC

Product: rhodanese-like protein

Products: NA

Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Transmembrane Protein; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Domain Protein; Thiosulfate Sulfurtransferase; Rhodanese-Like Domain-Containing; Rhodanese-Related Sulfurtransferases; Rhodanese-Like Domain-Containing Protein; Sulphurtransferase; Sulfate Permease Andrelated Transporter

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKFLIDNWMLISVALASGGMLIWPMISGVMNAGALSASGAVQLINREKAVVVDVSEADEFAAGHVGGAKNVPFGELESKL
PGVVKNKALPLILVCSSGARAGRAVAVAKKLGYEHAQSLGGGLKAWKEANLPLEKA

Sequences:

>Translated_136_residues
MKFLIDNWMLISVALASGGMLIWPMISGVMNAGALSASGAVQLINREKAVVVDVSEADEFAAGHVGGAKNVPFGELESKL
PGVVKNKALPLILVCSSGARAGRAVAVAKKLGYEHAQSLGGGLKAWKEANLPLEKA
>Mature_136_residues
MKFLIDNWMLISVALASGGMLIWPMISGVMNAGALSASGAVQLINREKAVVVDVSEADEFAAGHVGGAKNVPFGELESKL
PGVVKNKALPLILVCSSGARAGRAVAVAKKLGYEHAQSLGGGLKAWKEANLPLEKA

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14052; Mature: 14052

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLIDNWMLISVALASGGMLIWPMISGVMNAGALSASGAVQLINREKAVVVDVSEADEF
CCEECCCCEEEHHHHHCCCEEHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCH
AAGHVGGAKNVPFGELESKLPGVVKNKALPLILVCSSGARAGRAVAVAKKLGYEHAQSLG
HCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCHHHHHHHC
GGLKAWKEANLPLEKA
CHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKFLIDNWMLISVALASGGMLIWPMISGVMNAGALSASGAVQLINREKAVVVDVSEADEF
CCEECCCCEEEHHHHHCCCEEHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCH
AAGHVGGAKNVPFGELESKLPGVVKNKALPLILVCSSGARAGRAVAVAKKLGYEHAQSLG
HCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCHHHHHHHC
GGLKAWKEANLPLEKA
CHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA