Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is yibN [C]
Identifier: 91786789
GI number: 91786789
Start: 908593
End: 909003
Strand: Direct
Name: yibN [C]
Synonym: Bpro_0887
Alternate gene names: 91786789
Gene position: 908593-909003 (Clockwise)
Preceding gene: 91786785
Following gene: 91786790
Centisome position: 17.47
GC content: 61.31
Gene sequence:
>411_bases GTGAAATTTCTGATCGATAACTGGATGCTGATTTCGGTAGCGCTCGCCTCGGGCGGCATGCTGATCTGGCCCATGATTTC CGGTGTCATGAACGCCGGCGCGCTAAGCGCCAGCGGCGCCGTACAGCTGATCAACCGCGAAAAAGCCGTGGTCGTAGACG TGAGCGAGGCGGACGAGTTTGCGGCCGGCCATGTCGGTGGCGCCAAGAACGTGCCTTTCGGCGAACTGGAAAGCAAGCTG CCTGGCGTTGTGAAAAACAAGGCCTTGCCGCTGATCCTGGTGTGTTCCAGCGGTGCGCGCGCCGGCCGCGCCGTGGCCGT GGCCAAAAAGCTCGGTTACGAGCATGCCCAATCGCTGGGCGGCGGGCTGAAAGCCTGGAAAGAAGCTAACCTTCCGCTTG AAAAGGCGTGA
Upstream 100 bases:
>100_bases AAGGGTGCAGCAGGCAGGGGTAAAAGAGGCAGCCGGTAGGCAATTTCCGGCCTCCATTCTAAAATCACTGGTTTGGTGAA AAACACACAAAGGGTAGCAA
Downstream 100 bases:
>100_bases GAGGGCGGGGGGCCGCTCATTGCCTTGCCGCCGGGACGCGGCCCTGGACGGGCTGTTTCCGGCTTCCACCCATTTCCCTG CAGCGGCGCCTTGAAGGCGC
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Transmembrane Protein; Rhodanese-Related Sulfurtransferase; Rhodanese-Like Domain Protein; Thiosulfate Sulfurtransferase; Rhodanese-Like Domain-Containing; Rhodanese-Related Sulfurtransferases; Rhodanese-Like Domain-Containing Protein; Sulphurtransferase; Sulfate Permease Andrelated Transporter
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MKFLIDNWMLISVALASGGMLIWPMISGVMNAGALSASGAVQLINREKAVVVDVSEADEFAAGHVGGAKNVPFGELESKL PGVVKNKALPLILVCSSGARAGRAVAVAKKLGYEHAQSLGGGLKAWKEANLPLEKA
Sequences:
>Translated_136_residues MKFLIDNWMLISVALASGGMLIWPMISGVMNAGALSASGAVQLINREKAVVVDVSEADEFAAGHVGGAKNVPFGELESKL PGVVKNKALPLILVCSSGARAGRAVAVAKKLGYEHAQSLGGGLKAWKEANLPLEKA >Mature_136_residues MKFLIDNWMLISVALASGGMLIWPMISGVMNAGALSASGAVQLINREKAVVVDVSEADEFAAGHVGGAKNVPFGELESKL PGVVKNKALPLILVCSSGARAGRAVAVAKKLGYEHAQSLGGGLKAWKEANLPLEKA
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14052; Mature: 14052
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLIDNWMLISVALASGGMLIWPMISGVMNAGALSASGAVQLINREKAVVVDVSEADEF CCEECCCCEEEHHHHHCCCEEHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCH AAGHVGGAKNVPFGELESKLPGVVKNKALPLILVCSSGARAGRAVAVAKKLGYEHAQSLG HCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCHHHHHHHC GGLKAWKEANLPLEKA CHHHHHHHCCCCCCCC >Mature Secondary Structure MKFLIDNWMLISVALASGGMLIWPMISGVMNAGALSASGAVQLINREKAVVVDVSEADEF CCEECCCCEEEHHHHHCCCEEHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCH AAGHVGGAKNVPFGELESKLPGVVKNKALPLILVCSSGARAGRAVAVAKKLGYEHAQSLG HCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCHHHHHHHC GGLKAWKEANLPLEKA CHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA