Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is yhjG [H]
Identifier: 91786785
GI number: 91786785
Start: 903118
End: 905112
Strand: Direct
Name: yhjG [H]
Synonym: Bpro_0883
Alternate gene names: 91786785
Gene position: 903118-905112 (Clockwise)
Preceding gene: 91786783
Following gene: 91786789
Centisome position: 17.37
GC content: 61.8
Gene sequence:
>1995_bases ATGACCAAATCGTTGCTTCACTCCGCTGTTTTTCGCAGATCACTTGCGGGCCTTGCGGCCCTGGTCGTCGTTCTGGTGCT GGTGATTCTTTTTTTCCCCTGGGATGTTCTCCGCGGCCCGATCAATCGTCATGTATCGGACCAGCTGGGGCGCCGCTTCG AGATCACCCAACATCTCGCGGTTCATCTTGGGCGAACCGTCACTGTCAAGGCCGATGGCGTGGAAGTCGCCAACCCAGAA TGGGCCACTGAGCCCTATCTGCTCAAGGCCAGCGTCGCTGAATTTGACATCAAGCTGTGGCCGCTGCTGTTTGGACAGGT CGAACTGCCACGGATTGCATTGATCGCGCCGCAATTTGGCCTGCAGATCGAACCGGACGGACGGCGTACCTGGGCGCTTT CGCGCGATACGTCCGATGAGAGCGCTGTGCCTGTCATCGGGTCCTTGCTCGTAGACCAGGGTTCGCTGAAATACCTGTCG GCGGCGCAGGGCGCCAATATAGCGGTCACATTTTCCCTCTCTCCGGAGTTAGCCGGTCCGCTGCCCTTGAGCTACAAAGC TGCCGGTAAATGGAAAAATGAGGTCTTTAGCGCCAGCGGACGCACCGGCGGCGTGCTGCAGTTGCGCGCGAAAACCCAGG CACCTTTCCCCATCGAGATCAGTGCCCTGGCGGGAAAAACCAGCCTGAAAGCCCAGGGCTCGATTGCCAACCTCGCAGAC CTTGCAGGCGTGGATGCCACATTTGACCTGCGGGGCCGCAATCTCGAAGAGTTGTATAAATTGGTGGGTGTTGTGCTGCC TTCCACGCTGCCCTACAAGGTTCGCGGCAAGTTGGCCAAGCACGGCAAGGTATGGGCGGTCAGCCAGATTCAGGGCGTGT TGGGCAGCACTGACATCAACGGCGCCCTCCGCTTTGATCAGTCGGCGGCGGTGCCTGTTTTGACCGGCAATTTACAGTCA AAACTGCTGGACTTTGGGGATCTGGGGCCGATGATAGGCGCAACGCCCGCTGCCAGCAAAGCGGCCGAAGCCAAGGCCAA AGCACAAGCCGGGACAGAGCAGCCGGGCCGGGCCACGGCGTCTTCACGCAAGGTATTGCCCGCGACCATCCTGAGCCTGG CCAGACTTCAGGCCATGGATGCCGACGTGACCTACTCGGCGGCGAATATCCGGCATGTGCAGGCGCTCCCGCTGGACAAG GGCAGCGCCCACATCAAATTGAATGCGGGCGTCCTGCAGTTGAGCCCTTTTTCGCTGGGCGTGGCTGGCGGGTCGGTCGC CGGAAGCCTCAAGGTTGATTCCAACGTCGCGCCTGCGGCGTTCACTGCCCGGCTGGATGTGCGTGCGGTGCAGCTGAATC AGCTGTTCCCCAAAGTGGAGACAACCAGGAGCAGTCTCGGAAAAATCAGCGGGCAGTTCGACTTCCAGGGGCGTGGGGCT TCCGTGGCGCAAATCCTGGGATCTGCCTCGGGGCAAGTCGCCGTTCTCATGGGCAAAGGACAGATCAGCAACATACTGCT CGAATTCCTGGGGCTCGATGGCGGGGAGGTCATCAAGTTCCTGGTGCGCGGCGATCGCAATGTGCAACTGCGCTGCGCTG CGGCCGCCTTTGACGTGAACCAGGGCCTGATGACCAGCCGGGCCATCGTGCTGGATACGACCGACACGGTGATCAATGGC CGTGGCCGGGTGAGCCTGGCCGATGAAACGCTGGATATCGTCCTGGAACCGGCTCCCAAGGACCGCAGCATTCTGAGCCT CAGGTCACCGCTGCGGATTGGTGGGACCTTTGCATCACCGTCGGCCGGACCGGACAAGGGTGCGCTGGCCGGCCGCGCCG GTATCGCCCTGGTGCTGGGCGCCATCAACCCGCTGCTCGCGCTGGCTGCCACAATTGAAACAGGCCCCGGTCAGGATGCG GATTGCAGCGAGGTTCTGGCACAGGCCGCCAAGCCTAATGGGGGCTCCAGACCTGCTGCGACGGCCACCCGGTGA
Upstream 100 bases:
>100_bases ACGTGAGCCCTCTCAGGTTCACTGCGCGGTTCCGCATCGATGCCGTGTCGGCCAATGCAGGGACAGAATGTTGAGGCGGG CCTGAAACCCGCCGGGATGC
Downstream 100 bases:
>100_bases GTGGCGGGTGACCCTGGGCGCAGGGACCGGTTCTCGAGGCCCCCCGGCTCAATCAGTGGTAGTAGGTGTAGGCGTGGGAG CGGAGGCACCACAGACCGTG
Product: AsmA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 664; Mature: 663
Protein sequence:
>664_residues MTKSLLHSAVFRRSLAGLAALVVVLVLVILFFPWDVLRGPINRHVSDQLGRRFEITQHLAVHLGRTVTVKADGVEVANPE WATEPYLLKASVAEFDIKLWPLLFGQVELPRIALIAPQFGLQIEPDGRRTWALSRDTSDESAVPVIGSLLVDQGSLKYLS AAQGANIAVTFSLSPELAGPLPLSYKAAGKWKNEVFSASGRTGGVLQLRAKTQAPFPIEISALAGKTSLKAQGSIANLAD LAGVDATFDLRGRNLEELYKLVGVVLPSTLPYKVRGKLAKHGKVWAVSQIQGVLGSTDINGALRFDQSAAVPVLTGNLQS KLLDFGDLGPMIGATPAASKAAEAKAKAQAGTEQPGRATASSRKVLPATILSLARLQAMDADVTYSAANIRHVQALPLDK GSAHIKLNAGVLQLSPFSLGVAGGSVAGSLKVDSNVAPAAFTARLDVRAVQLNQLFPKVETTRSSLGKISGQFDFQGRGA SVAQILGSASGQVAVLMGKGQISNILLEFLGLDGGEVIKFLVRGDRNVQLRCAAAAFDVNQGLMTSRAIVLDTTDTVING RGRVSLADETLDIVLEPAPKDRSILSLRSPLRIGGTFASPSAGPDKGALAGRAGIALVLGAINPLLALAATIETGPGQDA DCSEVLAQAAKPNGGSRPAATATR
Sequences:
>Translated_664_residues MTKSLLHSAVFRRSLAGLAALVVVLVLVILFFPWDVLRGPINRHVSDQLGRRFEITQHLAVHLGRTVTVKADGVEVANPE WATEPYLLKASVAEFDIKLWPLLFGQVELPRIALIAPQFGLQIEPDGRRTWALSRDTSDESAVPVIGSLLVDQGSLKYLS AAQGANIAVTFSLSPELAGPLPLSYKAAGKWKNEVFSASGRTGGVLQLRAKTQAPFPIEISALAGKTSLKAQGSIANLAD LAGVDATFDLRGRNLEELYKLVGVVLPSTLPYKVRGKLAKHGKVWAVSQIQGVLGSTDINGALRFDQSAAVPVLTGNLQS KLLDFGDLGPMIGATPAASKAAEAKAKAQAGTEQPGRATASSRKVLPATILSLARLQAMDADVTYSAANIRHVQALPLDK GSAHIKLNAGVLQLSPFSLGVAGGSVAGSLKVDSNVAPAAFTARLDVRAVQLNQLFPKVETTRSSLGKISGQFDFQGRGA SVAQILGSASGQVAVLMGKGQISNILLEFLGLDGGEVIKFLVRGDRNVQLRCAAAAFDVNQGLMTSRAIVLDTTDTVING RGRVSLADETLDIVLEPAPKDRSILSLRSPLRIGGTFASPSAGPDKGALAGRAGIALVLGAINPLLALAATIETGPGQDA DCSEVLAQAAKPNGGSRPAATATR >Mature_663_residues TKSLLHSAVFRRSLAGLAALVVVLVLVILFFPWDVLRGPINRHVSDQLGRRFEITQHLAVHLGRTVTVKADGVEVANPEW ATEPYLLKASVAEFDIKLWPLLFGQVELPRIALIAPQFGLQIEPDGRRTWALSRDTSDESAVPVIGSLLVDQGSLKYLSA AQGANIAVTFSLSPELAGPLPLSYKAAGKWKNEVFSASGRTGGVLQLRAKTQAPFPIEISALAGKTSLKAQGSIANLADL AGVDATFDLRGRNLEELYKLVGVVLPSTLPYKVRGKLAKHGKVWAVSQIQGVLGSTDINGALRFDQSAAVPVLTGNLQSK LLDFGDLGPMIGATPAASKAAEAKAKAQAGTEQPGRATASSRKVLPATILSLARLQAMDADVTYSAANIRHVQALPLDKG SAHIKLNAGVLQLSPFSLGVAGGSVAGSLKVDSNVAPAAFTARLDVRAVQLNQLFPKVETTRSSLGKISGQFDFQGRGAS VAQILGSASGQVAVLMGKGQISNILLEFLGLDGGEVIKFLVRGDRNVQLRCAAAAFDVNQGLMTSRAIVLDTTDTVINGR GRVSLADETLDIVLEPAPKDRSILSLRSPLRIGGTFASPSAGPDKGALAGRAGIALVLGAINPLLALAATIETGPGQDAD CSEVLAQAAKPNGGSRPAATATR
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=677, Percent_Identity=29.9852289512555, Blast_Score=285, Evalue=8e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 69353; Mature: 69222
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSLLHSAVFRRSLAGLAALVVVLVLVILFFPWDVLRGPINRHVSDQLGRRFEITQHLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHCCEEHHHHHHH VHLGRTVTVKADGVEVANPEWATEPYLLKASVAEFDIKLWPLLFGQVELPRIALIAPQFG HHCCCEEEEEECCEEECCCCCCCCCEEEEEEHHHCCEEEEHHEECCCCCCEEEEECCCCC LQIEPDGRRTWALSRDTSDESAVPVIGSLLVDQGSLKYLSAAQGANIAVTFSLSPELAGP CEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEHHCCCCCEEEEEEECCCCCCC LPLSYKAAGKWKNEVFSASGRTGGVLQLRAKTQAPFPIEISALAGKTSLKAQGSIANLAD CCCCEECCCCCHHHHEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHH LAGVDATFDLRGRNLEELYKLVGVVLPSTLPYKVRGKLAKHGKVWAVSQIQGVLGSTDIN HCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHCCHHCCCCEEEHHHHHHHHCCCCCC GALRFDQSAAVPVLTGNLQSKLLDFGDLGPMIGATPAASKAAEAKAKAQAGTEQPGRATA CEEEECCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC SSRKVLPATILSLARLQAMDADVTYSAANIRHVQALPLDKGSAHIKLNAGVLQLSPFSLG CCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCCEEEEEECCEEEECCCEEE VAGGSVAGSLKVDSNVAPAAFTARLDVRAVQLNQLFPKVETTRSSLGKISGQFDFQGRGA ECCCCEEEEEEECCCCCCCEEEEEEEEEEEEHHHHCCHHHHHHHHHHCCCCEEEECCCCC SVAQILGSASGQVAVLMGKGQISNILLEFLGLDGGEVIKFLVRGDRNVQLRCAAAAFDVN HHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEEEECC QGLMTSRAIVLDTTDTVINGRGRVSLADETLDIVLEPAPKDRSILSLRSPLRIGGTFASP CCCHHCCEEEEECCCCEECCCCEEEECCCCEEEEECCCCCCCCHHHHCCCCEECCEECCC SAGPDKGALAGRAGIALVLGAINPLLALAATIETGPGQDADCSEVLAQAAKPNGGSRPAA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCC TATR CCCC >Mature Secondary Structure TKSLLHSAVFRRSLAGLAALVVVLVLVILFFPWDVLRGPINRHVSDQLGRRFEITQHLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHCCEEHHHHHHH VHLGRTVTVKADGVEVANPEWATEPYLLKASVAEFDIKLWPLLFGQVELPRIALIAPQFG HHCCCEEEEEECCEEECCCCCCCCCEEEEEEHHHCCEEEEHHEECCCCCCEEEEECCCCC LQIEPDGRRTWALSRDTSDESAVPVIGSLLVDQGSLKYLSAAQGANIAVTFSLSPELAGP CEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEHHCCCCCEEEEEEECCCCCCC LPLSYKAAGKWKNEVFSASGRTGGVLQLRAKTQAPFPIEISALAGKTSLKAQGSIANLAD CCCCEECCCCCHHHHEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHH LAGVDATFDLRGRNLEELYKLVGVVLPSTLPYKVRGKLAKHGKVWAVSQIQGVLGSTDIN HCCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHCCHHCCCCEEEHHHHHHHHCCCCCC GALRFDQSAAVPVLTGNLQSKLLDFGDLGPMIGATPAASKAAEAKAKAQAGTEQPGRATA CEEEECCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC SSRKVLPATILSLARLQAMDADVTYSAANIRHVQALPLDKGSAHIKLNAGVLQLSPFSLG CCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCCEEEEEECCEEEECCCEEE VAGGSVAGSLKVDSNVAPAAFTARLDVRAVQLNQLFPKVETTRSSLGKISGQFDFQGRGA ECCCCEEEEEEECCCCCCCEEEEEEEEEEEEHHHHCCHHHHHHHHHHCCCCEEEECCCCC SVAQILGSASGQVAVLMGKGQISNILLEFLGLDGGEVIKFLVRGDRNVQLRCAAAAFDVN HHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEEEEECC QGLMTSRAIVLDTTDTVINGRGRVSLADETLDIVLEPAPKDRSILSLRSPLRIGGTFASP CCCHHCCEEEEECCCCEECCCCEEEECCCCEEEEECCCCCCCCHHHHCCCCEECCEECCC SAGPDKGALAGRAGIALVLGAINPLLALAATIETGPGQDADCSEVLAQAAKPNGGSRPAA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCC TATR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]