Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91786767
Identifier: 91786767
GI number: 91786767
Start: 888375
End: 889001
Strand: Direct
Name: 91786767
Synonym: Bpro_0865
Alternate gene names: NA
Gene position: 888375-889001 (Clockwise)
Preceding gene: 91786766
Following gene: 91786768
Centisome position: 17.08
GC content: 58.85
Gene sequence:
>627_bases ATGAGTTCCATTCGCCGATGGCTTCTGGCCGGACTCCTGGTGCTGGTGCCTCTGGCCATCACCTTGTGGGTACTCGACTG GATCGTGGGAACGCTGGACCAGACCCTGCTGATTCTTCCGGGCGCCTGGCACCCCGACAGGCTGCTCGGGTTTCACATTC CCGGTTTCGGGGTGTTGCTGACGCTGCTTATCGTGCTGCTGATGGGTGCCATTGCCAGCAATTTCTTCGGCAAAAAGCTG GTCTCCTGGGGTAATTCGTTGCTGCACCGTATTCCGATTGTGCGGTCCATCTATTCGAGCGTGAAGCAGGTGTCTGACAC CCTGTTTTCCGAGAGCGGCGATGCCTTTCGCCAGGCCCTGCTGGTGCAATGGCCGCGTGAAGGCGTCTGGACGATCGGGT TCCTGACCGGTTTTCCCGGTGGTGATGTGGCCAACCATTTGCCCGATGATTACCTGAGCGTCTACGTCCCCACGACCCCC AACCCGACGGGCGGCTACTTCGTCATGCTGAAAAAAGCAGAGTGCATCGAGTTGAAAATGAGCGTCGATGAGGCGCTGAC GTACGTGATTTCGATGGGCGTTGTTGTTCCCGCAAAGCCCCTCCCGCCGCCGACTCAACCCCTGTAA
Upstream 100 bases:
>100_bases GCGCGGCCGCTGCAACGGCCACTGCCCCCGCAGCAGCTACGCCTGCTGCAGCGCCGGCCAGCCAGGGCGCGACCAGCGAT TCGTCGTCCAAAGCCGCGTG
Downstream 100 bases:
>100_bases ACGGCGAAAACTGCCCAAGAGCCCAAGAGGCATTGAAAGTTCGAGTATTTTTATGGCTATCGTTTCCCAAATGCGTTCCA ATTATTGCGGTCTGGTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MSSIRRWLLAGLLVLVPLAITLWVLDWIVGTLDQTLLILPGAWHPDRLLGFHIPGFGVLLTLLIVLLMGAIASNFFGKKL VSWGNSLLHRIPIVRSIYSSVKQVSDTLFSESGDAFRQALLVQWPREGVWTIGFLTGFPGGDVANHLPDDYLSVYVPTTP NPTGGYFVMLKKAECIELKMSVDEALTYVISMGVVVPAKPLPPPTQPL
Sequences:
>Translated_208_residues MSSIRRWLLAGLLVLVPLAITLWVLDWIVGTLDQTLLILPGAWHPDRLLGFHIPGFGVLLTLLIVLLMGAIASNFFGKKL VSWGNSLLHRIPIVRSIYSSVKQVSDTLFSESGDAFRQALLVQWPREGVWTIGFLTGFPGGDVANHLPDDYLSVYVPTTP NPTGGYFVMLKKAECIELKMSVDEALTYVISMGVVVPAKPLPPPTQPL >Mature_207_residues SSIRRWLLAGLLVLVPLAITLWVLDWIVGTLDQTLLILPGAWHPDRLLGFHIPGFGVLLTLLIVLLMGAIASNFFGKKLV SWGNSLLHRIPIVRSIYSSVKQVSDTLFSESGDAFRQALLVQWPREGVWTIGFLTGFPGGDVANHLPDDYLSVYVPTTPN PTGGYFVMLKKAECIELKMSVDEALTYVISMGVVVPAKPLPPPTQPL
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22831; Mature: 22700
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIRRWLLAGLLVLVPLAITLWVLDWIVGTLDQTLLILPGAWHPDRLLGFHIPGFGVLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHEEECCCCHHHHH TLLIVLLMGAIASNFFGKKLVSWGNSLLHRIPIVRSIYSSVKQVSDTLFSESGDAFRQAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LVQWPREGVWTIGFLTGFPGGDVANHLPDDYLSVYVPTTPNPTGGYFVMLKKAECIELKM HHHCCCCCCEEEEEECCCCCCCHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHH SVDEALTYVISMGVVVPAKPLPPPTQPL HHHHHHHHHHHHCCEECCCCCCCCCCCC >Mature Secondary Structure SSIRRWLLAGLLVLVPLAITLWVLDWIVGTLDQTLLILPGAWHPDRLLGFHIPGFGVLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHEEECCCCHHHHH TLLIVLLMGAIASNFFGKKLVSWGNSLLHRIPIVRSIYSSVKQVSDTLFSESGDAFRQAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LVQWPREGVWTIGFLTGFPGGDVANHLPDDYLSVYVPTTPNPTGGYFVMLKKAECIELKM HHHCCCCCCEEEEEECCCCCCCHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHH SVDEALTYVISMGVVVPAKPLPPPTQPL HHHHHHHHHHHHCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA