Definition | Polaromonas sp. JS666 chromosome, complete genome. |
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Accession | NC_007948 |
Length | 5,200,264 |
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The map label for this gene is 91786766
Identifier: 91786766
GI number: 91786766
Start: 888010
End: 888375
Strand: Direct
Name: 91786766
Synonym: Bpro_0864
Alternate gene names: NA
Gene position: 888010-888375 (Clockwise)
Preceding gene: 91786765
Following gene: 91786767
Centisome position: 17.08
GC content: 65.3
Gene sequence:
>366_bases ATGCCAATCTACGCCTATAAATGCGAGTCCTGCGGGCATGCCAAGGACGTCTTGCGAAAAATATCGGACGCGCCCTTGAC CGATTGCCCGCACTGCGGGAGCCCCACTTTCACGAAACAAGTCACCGCAGCCGGCTTTCAGCTCAAGGGCTCGGGCTGGT ACGTGACCGATTTCCGCGGCACGGACAAGGCGGCGCAGCCTGCCAAATCGGGTGACGGCGGGTCGACGGCGGCGGTAAGC ACAGGCAGCAAATCCGCCGATACAGGCGCGGCCGCTGCAACGGCCACTGCCCCCGCAGCAGCTACGCCTGCTGCAGCGCC GGCCAGCCAGGGCGCGACCAGCGATTCGTCGTCCAAAGCCGCGTGA
Upstream 100 bases:
>100_bases CGCCCGTTTGCCTTGAAGTTGGCGGCAACGCCTATAATTGAAGGTTTTGCACTGGTAAGCCTTCTTCAGGCGCAATTTCC CGGACAGAACCTCTAGCACT
Downstream 100 bases:
>100_bases TGAGTTCCATTCGCCGATGGCTTCTGGCCGGACTCCTGGTGCTGGTGCCTCTGGCCATCACCTTGTGGGTACTCGACTGG ATCGTGGGAACGCTGGACCA
Product: hypothetical protein
Products: NA
Alternate protein names: FmdB Family Regulatory Protein; Type I Antifreeze Protein; Regulatory Protein; Regulatory Protein FmdB Family Protein; Regulatory Protein FmdB Family Domain-Containing; FmdB Transcriptional Regulator; FmdB Family Protein
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MPIYAYKCESCGHAKDVLRKISDAPLTDCPHCGSPTFTKQVTAAGFQLKGSGWYVTDFRGTDKAAQPAKSGDGGSTAAVS TGSKSADTGAAAATATAPAAATPAAAPASQGATSDSSSKAA
Sequences:
>Translated_121_residues MPIYAYKCESCGHAKDVLRKISDAPLTDCPHCGSPTFTKQVTAAGFQLKGSGWYVTDFRGTDKAAQPAKSGDGGSTAAVS TGSKSADTGAAAATATAPAAATPAAAPASQGATSDSSSKAA >Mature_120_residues PIYAYKCESCGHAKDVLRKISDAPLTDCPHCGSPTFTKQVTAAGFQLKGSGWYVTDFRGTDKAAQPAKSGDGGSTAAVST GSKSADTGAAAATATAPAAATPAAAPASQGATSDSSSKAA
Specific function: Unknown
COG id: COG2331
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11858; Mature: 11727
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIYAYKCESCGHAKDVLRKISDAPLTDCPHCGSPTFTKQVTAAGFQLKGSGWYVTDFRG CCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCEEECCCCEEEEECCC TDKAAQPAKSGDGGSTAAVSTGSKSADTGAAAATATAPAAATPAAAPASQGATSDSSSKA CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC A C >Mature Secondary Structure PIYAYKCESCGHAKDVLRKISDAPLTDCPHCGSPTFTKQVTAAGFQLKGSGWYVTDFRG CCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCEEECCCCEEEEECCC TDKAAQPAKSGDGGSTAAVSTGSKSADTGAAAATATAPAAATPAAAPASQGATSDSSSKA CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA