Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91786763
Identifier: 91786763
GI number: 91786763
Start: 884555
End: 885556
Strand: Direct
Name: 91786763
Synonym: Bpro_0861
Alternate gene names: NA
Gene position: 884555-885556 (Clockwise)
Preceding gene: 91786762
Following gene: 91786764
Centisome position: 17.01
GC content: 65.37
Gene sequence:
>1002_bases ATGAAGATTTGGTCAATCATTCTTTCCGCCGTGATGGCGCTCACCATGGCTCTGCCGGGGACGGACGCAGAGGCTGCGCG TCTGGGCGGCGGCAAGTCATTTGGCAAGCAATCGTCCAACGTCACGCAGCGTGAGTCCACATCGGGTGGCGCCACTTCTG CAACCAACTCTGCGGCCAAACCGGCTGCACCGGCCGCGGCGCCTGCCCCGGTTGCGCCGAAGAAACCTTGGGGCGCCATG CTGGGCGGCCTGGCTGCCGGCCTCGGCCTGGCCTGGCTGGCTTCGTCGCTGGGCCTGGGTGAAGCCTTCGGCCAGGTCAT CATGTTCGCGTTGCTGGCCCTGGTGATCATGGTGGCGGTCGGGTTCATCATGCGCAAGCTCAAGGGCGGCGGGGCCGGTG CCGCGGCTCCACGCACGCAGGAGCCATTTGCCTTCCAGGGTGCGGGCAACGCTGCCACCCCCAGGAACTACAGCCCCGAG AATGTCGGCAACGATGCCTCGGCACGCCCGTGGGAGCGAAGCGGCATGGCCTTCGACGCGAACCGCGATGCGGGAGCCAC GCCTGCCACCGGCTCGATGATTGGCTCGGCCTTGCTCGGCACCCAGACCTGGGGCGTTCCCGCCGGGTTTGATGCCGAGG GCTTCCTTAAGGCCAGCAAGGCGAATTTCGTGACGCTGCAGGACGCCTGGGACCGCTCTGACATCCAGAGCTTGCGCGCC ATGATGACCGACGACATGCTCGAGCAGATCAAGGCACAGCTGGCCGATCGCGAATCGCACACTGGTGGTGTGGTCAACCG GACCGAGGTCGTGATGCTCAATGCGCAGCTGCTGGGCATAGAGGAGCTGAGCGATACGTATATGGCTAGCGTGGAGTTCT CGGGCATGATCCGCGAAGACGCTTCCGCCGGTGCCAGCCCCTTCCGCGAAGTCTGGAACATGACCAAGCCGCGTAACGGC GGCAGCGGCTGGCTCGTAGCCGGCGTTCAAGCTCTCCAGTAA
Upstream 100 bases:
>100_bases TAGTGGCATTGCATGTTGCAATCAAATGCTGAAGAAGTGTTGAAGAAGTTAAACCGGCTTAAATAAACAAACAGGCGCAA GGCTTGCTCAAGGAGACGTT
Downstream 100 bases:
>100_bases ACCCGCGCGCAGGTCTCCACTTCCACTTCCAGCAGGGGCCGCGGGACTGGCTTTGCCAGACCGCAGGCGCAGCGGCCCCC TCGGGGGGCAGAGAGCTACA
Product: import inner membrane translocase subunit Tim44
Products: NA
Alternate protein names: Transmembrane Protein; Tim44 Domain Protein; Hypothtical Protein; Import Inner Membrane Translocase Subunit; Tim44-Like Domain-Containing Protein; Tim44-Like Domain Protein
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MKIWSIILSAVMALTMALPGTDAEAARLGGGKSFGKQSSNVTQRESTSGGATSATNSAAKPAAPAAAPAPVAPKKPWGAM LGGLAAGLGLAWLASSLGLGEAFGQVIMFALLALVIMVAVGFIMRKLKGGGAGAAAPRTQEPFAFQGAGNAATPRNYSPE NVGNDASARPWERSGMAFDANRDAGATPATGSMIGSALLGTQTWGVPAGFDAEGFLKASKANFVTLQDAWDRSDIQSLRA MMTDDMLEQIKAQLADRESHTGGVVNRTEVVMLNAQLLGIEELSDTYMASVEFSGMIREDASAGASPFREVWNMTKPRNG GSGWLVAGVQALQ
Sequences:
>Translated_333_residues MKIWSIILSAVMALTMALPGTDAEAARLGGGKSFGKQSSNVTQRESTSGGATSATNSAAKPAAPAAAPAPVAPKKPWGAM LGGLAAGLGLAWLASSLGLGEAFGQVIMFALLALVIMVAVGFIMRKLKGGGAGAAAPRTQEPFAFQGAGNAATPRNYSPE NVGNDASARPWERSGMAFDANRDAGATPATGSMIGSALLGTQTWGVPAGFDAEGFLKASKANFVTLQDAWDRSDIQSLRA MMTDDMLEQIKAQLADRESHTGGVVNRTEVVMLNAQLLGIEELSDTYMASVEFSGMIREDASAGASPFREVWNMTKPRNG GSGWLVAGVQALQ >Mature_333_residues MKIWSIILSAVMALTMALPGTDAEAARLGGGKSFGKQSSNVTQRESTSGGATSATNSAAKPAAPAAAPAPVAPKKPWGAM LGGLAAGLGLAWLASSLGLGEAFGQVIMFALLALVIMVAVGFIMRKLKGGGAGAAAPRTQEPFAFQGAGNAATPRNYSPE NVGNDASARPWERSGMAFDANRDAGATPATGSMIGSALLGTQTWGVPAGFDAEGFLKASKANFVTLQDAWDRSDIQSLRA MMTDDMLEQIKAQLADRESHTGGVVNRTEVVMLNAQLLGIEELSDTYMASVEFSGMIREDASAGASPFREVWNMTKPRNG GSGWLVAGVQALQ
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34354; Mature: 34354
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIWSIILSAVMALTMALPGTDAEAARLGGGKSFGKQSSNVTQRESTSGGATSATNSAAK CHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHCCCCCCCCHHCCCCCCCCCCCCCCCC PAAPAAAPAPVAPKKPWGAMLGGLAAGLGLAWLASSLGLGEAFGQVIMFALLALVIMVAV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GFIMRKLKGGGAGAAAPRTQEPFAFQGAGNAATPRNYSPENVGNDASARPWERSGMAFDA HHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEC NRDAGATPATGSMIGSALLGTQTWGVPAGFDAEGFLKASKANFVTLQDAWDRSDIQSLRA CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCCEEEECCCCCHHHHHHHHH MMTDDMLEQIKAQLADRESHTGGVVNRTEVVMLNAQLLGIEELSDTYMASVEFSGMIRED HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH ASAGASPFREVWNMTKPRNGGSGWLVAGVQALQ HCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MKIWSIILSAVMALTMALPGTDAEAARLGGGKSFGKQSSNVTQRESTSGGATSATNSAAK CHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHCCCCCCCCHHCCCCCCCCCCCCCCCC PAAPAAAPAPVAPKKPWGAMLGGLAAGLGLAWLASSLGLGEAFGQVIMFALLALVIMVAV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GFIMRKLKGGGAGAAAPRTQEPFAFQGAGNAATPRNYSPENVGNDASARPWERSGMAFDA HHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEC NRDAGATPATGSMIGSALLGTQTWGVPAGFDAEGFLKASKANFVTLQDAWDRSDIQSLRA CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCCEEEECCCCCHHHHHHHHH MMTDDMLEQIKAQLADRESHTGGVVNRTEVVMLNAQLLGIEELSDTYMASVEFSGMIRED HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH ASAGASPFREVWNMTKPRNGGSGWLVAGVQALQ HCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA