Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is tal

Identifier: 91786654

GI number: 91786654

Start: 770261

End: 771208

Strand: Direct

Name: tal

Synonym: Bpro_0752

Alternate gene names: 91786654

Gene position: 770261-771208 (Clockwise)

Preceding gene: 91786651

Following gene: 91786655

Centisome position: 14.81

GC content: 63.82

Gene sequence:

>948_bases
ATGAATCAGCTCGAATCCCTCAAACAATTCACCACCGTGGTCGCCGACACCGGTGACTTCAGGCAACTGGGCCAGTTCAA
GCCGCAGGACGCGACCACCAACCCGTCGCTCATCCTCAAGGCGGTGCAAAAGGCCGACTACCAGCCCCTGCTGAAAGAGA
CGGTGGCCCGGTTCAAGGGCCGGGCGCTGGATGAAGTCATGGACCGGCTGCTGGTGCGCTTTGGCTGCGAAATCCTCTCC
ATCATTCCCGGACGCGTGTCCACGGAAGTCGATGCCCGCCTGAGCTTTGATGCCAACGCCAGCTATACGCGCGGCGAGCG
CATCGTCGAGCTGTACCAGGCCGAAGGCATTCACATTGACCGCGTGCTGATCAAGGTGGCCGCCACCTGGGAGGGCATCC
AGGCGGCAGAGCGGCTGGAGCGGCGCGGCATCCATACCAACCTGACGCTGCTGTTTTCGTTCTGCCAGGCGGTGGCCTGC
GGCCAGGCCAGGGTGCAGCTGATTTCGCCCTTTGTGGGCCGCATTTACGACTGGTACAAGAAGTCGGCCGGCGCCGCGTG
GGACGAAGCCGCCAATGCTGGCGCCAACGACCCCGGCGTGAAGTCGGTACGCCAGATCTACAACCATTACAAGCACTTCG
GCATTGCCACCGAGGTCATGGGTGCGAGCTTTCGCAATGCAGGCCAGATCACCGCGCTGGCGGGCTGCGACCTGCTGACC
ATCAGCCCAGAACTGCTGGCGCAGCTGGCCGCGTCCGAAGCGCCGCTGGCCCGCTCGCTGGACGCCGGGGCTGCCAGGTC
GCTCGACTTGCCCGCCGTGAATTACGACGAAACCGGTTTCCGCTACGCGCTCAACGAAGACGCCATGGCCACCGAAAAGC
TGGCCGAAGGCATACGCGCCTTTGCGGCCGATGCGATCAAGCTTGAGCAGCTGATGGTGGCGGCATGA

Upstream 100 bases:

>100_bases
CTGCTTTGTAATTTAGTTTCACATTAATTTGGCATAATGGTAACTCAAACGGGCTGTCTTCTGACAGCGCTTTTTATCCC
TGCCACCTACACTTTTGGCC

Downstream 100 bases:

>100_bases
GTCAGTCCATGAAACGCCTTCGTTGTGATCAGACCCCGGCCTGGGCGGCGCTGCAGGCCAGCTTTGAAGCCGGCGGAAAA
TCCTTCGATCTGCGTGAGGC

Product: transaldolase B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MNQLESLKQFTTVVADTGDFRQLGQFKPQDATTNPSLILKAVQKADYQPLLKETVARFKGRALDEVMDRLLVRFGCEILS
IIPGRVSTEVDARLSFDANASYTRGERIVELYQAEGIHIDRVLIKVAATWEGIQAAERLERRGIHTNLTLLFSFCQAVAC
GQARVQLISPFVGRIYDWYKKSAGAAWDEAANAGANDPGVKSVRQIYNHYKHFGIATEVMGASFRNAGQITALAGCDLLT
ISPELLAQLAASEAPLARSLDAGAARSLDLPAVNYDETGFRYALNEDAMATEKLAEGIRAFAADAIKLEQLMVAA

Sequences:

>Translated_315_residues
MNQLESLKQFTTVVADTGDFRQLGQFKPQDATTNPSLILKAVQKADYQPLLKETVARFKGRALDEVMDRLLVRFGCEILS
IIPGRVSTEVDARLSFDANASYTRGERIVELYQAEGIHIDRVLIKVAATWEGIQAAERLERRGIHTNLTLLFSFCQAVAC
GQARVQLISPFVGRIYDWYKKSAGAAWDEAANAGANDPGVKSVRQIYNHYKHFGIATEVMGASFRNAGQITALAGCDLLT
ISPELLAQLAASEAPLARSLDAGAARSLDLPAVNYDETGFRYALNEDAMATEKLAEGIRAFAADAIKLEQLMVAA
>Mature_315_residues
MNQLESLKQFTTVVADTGDFRQLGQFKPQDATTNPSLILKAVQKADYQPLLKETVARFKGRALDEVMDRLLVRFGCEILS
IIPGRVSTEVDARLSFDANASYTRGERIVELYQAEGIHIDRVLIKVAATWEGIQAAERLERRGIHTNLTLLFSFCQAVAC
GQARVQLISPFVGRIYDWYKKSAGAAWDEAANAGANDPGVKSVRQIYNHYKHFGIATEVMGASFRNAGQITALAGCDLLT
ISPELLAQLAASEAPLARSLDAGAARSLDLPAVNYDETGFRYALNEDAMATEKLAEGIRAFAADAIKLEQLMVAA

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 1 subfamily

Homologues:

Organism=Homo sapiens, GI5803187, Length=317, Percent_Identity=57.4132492113565, Blast_Score=354, Evalue=5e-98,
Organism=Escherichia coli, GI1788807, Length=320, Percent_Identity=52.8125, Blast_Score=315, Evalue=2e-87,
Organism=Escherichia coli, GI1786189, Length=318, Percent_Identity=53.1446540880503, Blast_Score=314, Evalue=4e-87,
Organism=Caenorhabditis elegans, GI25153750, Length=321, Percent_Identity=56.386292834891, Blast_Score=338, Evalue=2e-93,
Organism=Caenorhabditis elegans, GI25153752, Length=167, Percent_Identity=57.4850299401198, Blast_Score=187, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI17570473, Length=95, Percent_Identity=61.0526315789474, Blast_Score=109, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6323386, Length=321, Percent_Identity=55.1401869158878, Blast_Score=313, Evalue=2e-86,
Organism=Saccharomyces cerevisiae, GI6321480, Length=321, Percent_Identity=50.1557632398754, Blast_Score=305, Evalue=5e-84,
Organism=Drosophila melanogaster, GI45549185, Length=319, Percent_Identity=54.5454545454545, Blast_Score=343, Evalue=1e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TAL_POLSJ (Q12FI4)

Other databases:

- EMBL:   CP000316
- RefSeq:   YP_547606.1
- ProteinModelPortal:   Q12FI4
- SMR:   Q12FI4
- STRING:   Q12FI4
- GeneID:   4011309
- GenomeReviews:   CP000316_GR
- KEGG:   pol:Bpro_0752
- NMPDR:   fig|296591.1.peg.1157
- eggNOG:   COG0176
- HOGENOM:   HBG286747
- OMA:   GCEILAI
- PhylomeDB:   Q12FI4
- ProtClustDB:   PRK05269
- BioCyc:   PSP296591:BPRO_0752-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00492
- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004730
- InterPro:   IPR018225
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR10683
- PANTHER:   PTHR10683:SF3
- TIGRFAMs:   TIGR00874

Pfam domain/function: PF00923 Transaldolase

EC number: =2.2.1.2

Molecular weight: Translated: 34430; Mature: 34430

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2

Important sites: ACT_SITE 125-125

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQLESLKQFTTVVADTGDFRQLGQFKPQDATTNPSLILKAVQKADYQPLLKETVARFKG
CCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
RALDEVMDRLLVRFGCEILSIIPGRVSTEVDARLSFDANASYTRGERIVELYQAEGIHID
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCHH
RVLIKVAATWEGIQAAERLERRGIHTNLTLLFSFCQAVACGQARVQLISPFVGRIYDWYK
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSAGAAWDEAANAGANDPGVKSVRQIYNHYKHFGIATEVMGASFRNAGQITALAGCDLLT
HHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEE
ISPELLAQLAASEAPLARSLDAGAARSLDLPAVNYDETGFRYALNEDAMATEKLAEGIRA
ECHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHH
FAADAIKLEQLMVAA
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MNQLESLKQFTTVVADTGDFRQLGQFKPQDATTNPSLILKAVQKADYQPLLKETVARFKG
CCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
RALDEVMDRLLVRFGCEILSIIPGRVSTEVDARLSFDANASYTRGERIVELYQAEGIHID
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCHH
RVLIKVAATWEGIQAAERLERRGIHTNLTLLFSFCQAVACGQARVQLISPFVGRIYDWYK
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSAGAAWDEAANAGANDPGVKSVRQIYNHYKHFGIATEVMGASFRNAGQITALAGCDLLT
HHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEE
ISPELLAQLAASEAPLARSLDAGAARSLDLPAVNYDETGFRYALNEDAMATEKLAEGIRA
ECHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHH
FAADAIKLEQLMVAA
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA