Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yhfA [H]

Identifier: 91786646

GI number: 91786646

Start: 760017

End: 760475

Strand: Direct

Name: yhfA [H]

Synonym: Bpro_0744

Alternate gene names: 91786646

Gene position: 760017-760475 (Clockwise)

Preceding gene: 91786636

Following gene: 91786649

Centisome position: 14.61

GC content: 64.49

Gene sequence:

>459_bases
ATGGAATGCACAGTGAGTTGGACAGGTCCCAGCGCAACGACCGGGTCACGTTCGGGCATGACGTTTCTGGCCGAAACCGG
CAGCGGCCACACCCTGGTGATGGATGGCGCGCCCGATGCGGACAAGCCGGAGAACGGCGGTGCCAACCTGGCGCCGCGGC
CCATGGAGACCGTGCTGGCCGGCACCGGAGGGTGCACGGCCTATGACGTGGTGCTGATCCTCAAGCGCGGCCGCCACGAC
GTGCGGGGCTGCTCGGTCAAGCTCAGTTCAGAACGGGCGCCGACGGATCCCAAGGTGTTCACCAAAATCCACATGCATTT
TGTCGTGACCGGGCGCGGCCTGGCTGCCAGTGCGGTCGAGCGCGCCATTGCCATGAGCCATGACAAATACTGCTCGGCCA
CCATCATGCTGGGCAAGACGGCCGACATCACCACCAGTTTTGAGTTGCAGGAGGCGTGA

Upstream 100 bases:

>100_bases
TCAGTATAGCCGGAGCCATGTTGCGCTGCACAATATGTGTGGCAAAAATTCGACATTTCCAGCGTTTAGTTATAAATTTT
TTGCATAAGGAATGGTGTTT

Downstream 100 bases:

>100_bases
GAGAGTGAGAGTTTTTCGATTTCACTCCCTCTCCCTCTCCCTCTGGGAGAGGGCGGGGGTGAGGGCCGGCGAGTGGCCAC
AGCACTGGAGCACAGCCCCT

Product: OsmC-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MECTVSWTGPSATTGSRSGMTFLAETGSGHTLVMDGAPDADKPENGGANLAPRPMETVLAGTGGCTAYDVVLILKRGRHD
VRGCSVKLSSERAPTDPKVFTKIHMHFVVTGRGLAASAVERAIAMSHDKYCSATIMLGKTADITTSFELQEA

Sequences:

>Translated_152_residues
MECTVSWTGPSATTGSRSGMTFLAETGSGHTLVMDGAPDADKPENGGANLAPRPMETVLAGTGGCTAYDVVLILKRGRHD
VRGCSVKLSSERAPTDPKVFTKIHMHFVVTGRGLAASAVERAIAMSHDKYCSATIMLGKTADITTSFELQEA
>Mature_152_residues
MECTVSWTGPSATTGSRSGMTFLAETGSGHTLVMDGAPDADKPENGGANLAPRPMETVLAGTGGCTAYDVVLILKRGRHD
VRGCSVKLSSERAPTDPKVFTKIHMHFVVTGRGLAASAVERAIAMSHDKYCSATIMLGKTADITTSFELQEA

Specific function: Unknown

COG id: COG1765

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789755, Length=149, Percent_Identity=46.9798657718121, Blast_Score=137, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR003718 [H]

Pfam domain/function: PF02566 OsmC [H]

EC number: NA

Molecular weight: Translated: 15945; Mature: 15945

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECTVSWTGPSATTGSRSGMTFLAETGSGHTLVMDGAPDADKPENGGANLAPRPMETVLA
CEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHEEE
GTGGCTAYDVVLILKRGRHDVRGCSVKLSSERAPTDPKVFTKIHMHFVVTGRGLAASAVE
CCCCCHHHEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEECCCCHHHHHH
RAIAMSHDKYCSATIMLGKTADITTSFELQEA
HHHHHCCCCCEEEEEEECCCCCCEEEEEEECC
>Mature Secondary Structure
MECTVSWTGPSATTGSRSGMTFLAETGSGHTLVMDGAPDADKPENGGANLAPRPMETVLA
CEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHEEE
GTGGCTAYDVVLILKRGRHDVRGCSVKLSSERAPTDPKVFTKIHMHFVVTGRGLAASAVE
CCCCCHHHEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEECCCCHHHHHH
RAIAMSHDKYCSATIMLGKTADITTSFELQEA
HHHHHCCCCCEEEEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]