Definition | Polaromonas sp. JS666 chromosome, complete genome. |
---|---|
Accession | NC_007948 |
Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is yhfA [H]
Identifier: 91786646
GI number: 91786646
Start: 760017
End: 760475
Strand: Direct
Name: yhfA [H]
Synonym: Bpro_0744
Alternate gene names: 91786646
Gene position: 760017-760475 (Clockwise)
Preceding gene: 91786636
Following gene: 91786649
Centisome position: 14.61
GC content: 64.49
Gene sequence:
>459_bases ATGGAATGCACAGTGAGTTGGACAGGTCCCAGCGCAACGACCGGGTCACGTTCGGGCATGACGTTTCTGGCCGAAACCGG CAGCGGCCACACCCTGGTGATGGATGGCGCGCCCGATGCGGACAAGCCGGAGAACGGCGGTGCCAACCTGGCGCCGCGGC CCATGGAGACCGTGCTGGCCGGCACCGGAGGGTGCACGGCCTATGACGTGGTGCTGATCCTCAAGCGCGGCCGCCACGAC GTGCGGGGCTGCTCGGTCAAGCTCAGTTCAGAACGGGCGCCGACGGATCCCAAGGTGTTCACCAAAATCCACATGCATTT TGTCGTGACCGGGCGCGGCCTGGCTGCCAGTGCGGTCGAGCGCGCCATTGCCATGAGCCATGACAAATACTGCTCGGCCA CCATCATGCTGGGCAAGACGGCCGACATCACCACCAGTTTTGAGTTGCAGGAGGCGTGA
Upstream 100 bases:
>100_bases TCAGTATAGCCGGAGCCATGTTGCGCTGCACAATATGTGTGGCAAAAATTCGACATTTCCAGCGTTTAGTTATAAATTTT TTGCATAAGGAATGGTGTTT
Downstream 100 bases:
>100_bases GAGAGTGAGAGTTTTTCGATTTCACTCCCTCTCCCTCTCCCTCTGGGAGAGGGCGGGGGTGAGGGCCGGCGAGTGGCCAC AGCACTGGAGCACAGCCCCT
Product: OsmC-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MECTVSWTGPSATTGSRSGMTFLAETGSGHTLVMDGAPDADKPENGGANLAPRPMETVLAGTGGCTAYDVVLILKRGRHD VRGCSVKLSSERAPTDPKVFTKIHMHFVVTGRGLAASAVERAIAMSHDKYCSATIMLGKTADITTSFELQEA
Sequences:
>Translated_152_residues MECTVSWTGPSATTGSRSGMTFLAETGSGHTLVMDGAPDADKPENGGANLAPRPMETVLAGTGGCTAYDVVLILKRGRHD VRGCSVKLSSERAPTDPKVFTKIHMHFVVTGRGLAASAVERAIAMSHDKYCSATIMLGKTADITTSFELQEA >Mature_152_residues MECTVSWTGPSATTGSRSGMTFLAETGSGHTLVMDGAPDADKPENGGANLAPRPMETVLAGTGGCTAYDVVLILKRGRHD VRGCSVKLSSERAPTDPKVFTKIHMHFVVTGRGLAASAVERAIAMSHDKYCSATIMLGKTADITTSFELQEA
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789755, Length=149, Percent_Identity=46.9798657718121, Blast_Score=137, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR003718 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: NA
Molecular weight: Translated: 15945; Mature: 15945
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECTVSWTGPSATTGSRSGMTFLAETGSGHTLVMDGAPDADKPENGGANLAPRPMETVLA CEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHEEE GTGGCTAYDVVLILKRGRHDVRGCSVKLSSERAPTDPKVFTKIHMHFVVTGRGLAASAVE CCCCCHHHEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEECCCCHHHHHH RAIAMSHDKYCSATIMLGKTADITTSFELQEA HHHHHCCCCCEEEEEEECCCCCCEEEEEEECC >Mature Secondary Structure MECTVSWTGPSATTGSRSGMTFLAETGSGHTLVMDGAPDADKPENGGANLAPRPMETVLA CEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHEEE GTGGCTAYDVVLILKRGRHDVRGCSVKLSSERAPTDPKVFTKIHMHFVVTGRGLAASAVE CCCCCHHHEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEEEEEEECCCCHHHHHH RAIAMSHDKYCSATIMLGKTADITTSFELQEA HHHHHCCCCCEEEEEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]