Click here to switch to the map view.

The map label for this gene is ygjK [H]

Identifier: 91212511

GI number: 91212511

Start: 3456687

End: 3459038

Strand: Direct

Name: ygjK [H]

Synonym: UTI89_C3520

Alternate gene names: 91212511

Gene position: 3456687-3459038 (Clockwise)

Preceding gene: 91212510

Following gene: 91212512

Centisome position: 68.24

GC content: 54.51

Gene sequence:

>2352_bases
ATGAAAATAAAAACCATTTTAACGCCAGTAGCCTGTGCTCTGCTGATGAGCTTTTCCGCCCATGCCGCTAACGCTGACAA
TTATAAAAACGTGATTAACCGTACTGGCGCGCCGCAGTACATGAAGGATTACGATTACGACGATCACCAGCGTTTTAATC
CGTTTTTCGATCTCGGAGCCTGGCATGGTCATCTGTTGCCAGACGGCCCGAACACTATGGGCGGCTTTCCTGGCGTTGCG
CTGCTGACGGAAGAATACATCAACTTTATGGCCAGCAATTTCGATCGCCTGACCGTCTGGCAAGACGGCAAGAAAGTCGA
TTTCACGCTGGAGGCATACAGTATTCCCGGCGCGCTGGTGCAAAAGTTGATATCGAAAGATGTACAGGTCGAAATGATTC
TGCGCTTCGCCACGCCGCGCACATCACTACTGGAAACCAAAATCACCAGCGATAAACCGCTGGATCTGGTGTGGGATGGC
GAACTGCTGGAAAAACTGGAAGCGAAAGAAGGGAAACCGCTTTCCGATAAAACCATTGCTGGCGAATACCCTGACTATCA
GCGCAAAATCAGCGCCACCCGTGATGGCCTGAAAGTCACCTTTGGCAAAGTGCGCGCCACCTGGGATCTGCTGACCTCCG
GTGAATCAGAATATCAGGTGCATAAATCCCTGCCAGTGCAGACTGAAATCAACGGCAATCGCTTTACCAGTAAGGCGCAT
ATCAACGGTTCGACGACGCTCTATACCACCTACTCCCATCTGCTGACCGCTCAGGAAGTTAGCAAAGAGCAAATGCAGAT
CCGCGATATTCTGGCGCGTCCGGCGTTTTATCTCACCGCCTCGCAGCAACGCTGGGAAGAGTATCTGAAGAAAGGGTTAA
CCAATCCGGATGCGACGCCGGAACAGACGCGCGTCGCGGTGAAAGCCATCGAAACGCTCAACGGTAACTGGCGATCGCCG
GGCGGTGCGGTGAAATATAACACCGTCACGCCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGA
TACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGATATCGCCAAAGAGAATATCCGCGCGGTCTTCTCCTGGC
AGATCCAGCCAGGCGACAGCGTGCGTCCGCAGGATGTGGGCTTTGTCCCCGACCTGATTGCGTGGAACCTTAGCCCCGAG
CGTGGCGGCGATGGCGGCAACTGGAACGAACGCAATACCAAGCCCAGCCTTGCCGCCTGGTCGGTGATGGAAGTGTACAA
CGTCACCCAGGATAAAACCTGGCTGGCAGAGATGTACCCGAAACTGGTGGCCTATCACGACTGGTGGTTACGTAACCGCG
ATCATAACGGCAACGGCGTGCCGGAATATGGCGCGACCCGCGACAAAGCCCACAACACCGAGAGCGGCGAGATGCTGTTT
ACGGTGAAAAAAGGCGACAAAGAAGAGACGCGGTCTGGGCTGAACAACTACGCCCGCGTGGTGGAGAAAGGCCAGTACGA
CAGTCTGGAAATTCCGGCACAGGTTGCCGCGTCGTGGGAATCGGGTCGTGATGATGCCGCCGTTTTTGGGTTTATCGACA
AGGAACAGTTGGATAAATATGTCGCTAACGGCGGCAAACGTAGCGACTGGACGGTGAAATTCGCCGAGAACCGCAGTCAG
GACGGAACGTTGCTGGGCTACTCGCTATTGCAGGAGTCGGTGGATCAGGCCAGCTATATGTACAGCGATAACCATTATCT
GGCGGAGATGGCGACGATTCTCGGTAAGCCGGAAGAGGCCAAACGCTATCGTCAGTTAGCACAACAGCTCGCGGACTACA
TCAACACTTGTATGTTCGACCCGACTACACAGTTCTACTATGACGTGCGTATTGAAGATAAACCGCTGGCGAACGGCTGC
GCGGGCAAACCGATTGTTGAGCGCGGTAAAGGGCCAGAAGGCTGGTCGCCGCTGTTTAACGGTGCGGCAACGCAGGCCAA
CGCCGACGCGGTGGTGAAGGTGATGCTCGATCCTAAAGAGTTCAACACCTTTGTACCGCTGGGAACGGCAGCGTTAACCA
ACCCGGCTTTTGGCGCTGATATCTACTGGCGCGGGCGCGTATGGGTAGATCAGTTCTGGTTTGGTCTGAAAGGAATGGAG
CGTTACGGTTATCGTGATGATGCCCTGAAACTGGCGGATACGTTCTTCCAGCATGCCAAAGGATTAACCGCCGATGGCCC
AATTCAGGAGAATTACAACCCGCTGACTGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCGCATTTGTATA
TGTTGTATAACGATTTTTTCCGTAAGCAGTAA

Upstream 100 bases:

>100_bases
GCTTTTGATAGCCGCTTCTACATGAAAAATGCCTCTCACGATCCCAGCGACCAACTCTTCCTGATGCAATATTTTTACTG
GTAATAAGGACAGTAATCTC

Downstream 100 bases:

>100_bases
TTTTTCCCGATGCCGGACGACTGTATTACCGCCGTCCGGCATGACGAACGGGCGTATTCTTTTTGAATCCCATCACAAAC
CCCGCACTCCCCTTTTCCCT

Product: putative glycosyl hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 783; Mature: 783

Protein sequence:

>783_residues
MKIKTILTPVACALLMSFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVA
LLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALVQKLISKDVQVEMILRFATPRTSLLETKITSDKPLDLVWDG
ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSP
GGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPE
RGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKTWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF
TVKKGDKEETRSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQ
DGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGC
AGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
RYGYRDDALKLADTFFQHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ

Sequences:

>Translated_783_residues
MKIKTILTPVACALLMSFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVA
LLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALVQKLISKDVQVEMILRFATPRTSLLETKITSDKPLDLVWDG
ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSP
GGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPE
RGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKTWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF
TVKKGDKEETRSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQ
DGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGC
AGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
RYGYRDDALKLADTFFQHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ
>Mature_783_residues
MKIKTILTPVACALLMSFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVA
LLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALVQKLISKDVQVEMILRFATPRTSLLETKITSDKPLDLVWDG
ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSP
GGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPE
RGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKTWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF
TVKKGDKEETRSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQ
DGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGC
AGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
RYGYRDDALKLADTFFQHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFFRKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789462, Length=783, Percent_Identity=98.7228607918263, Blast_Score=1614, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR001661 [H]

Pfam domain/function: PF01204 Trehalase [H]

EC number: NA

Molecular weight: Translated: 88381; Mature: 88381

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKTILTPVACALLMSFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGA
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHCCCC
WHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCCHHHH
QKLISKDVQVEMILRFATPRTSLLETKITSDKPLDLVWDGELLEKLEAKEGKPLSDKTIA
HHHHCCCCEEEEEEEECCCCHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCC
GEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
CCCCHHHHHHHHCCCCCEEEEHHHHEEEHHHHCCCCCEEHHHCCCEEEECCCCEEEEEEE
INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATP
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCH
EQTRVAVKAIETLNGNWRSPGGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNP
HHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHCCH
DIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAW
HHHHHCEEEEEEEEECCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHH
SVMEVYNVTQDKTWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
TVKKGDKEETRSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKY
EEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHH
VANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEA
HHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCHHH
KRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFN
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCHHHC
GAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
CCCCCCCCCEEEEEEECHHHCCCCCCCCHHHHCCCCCCCCEEECCEEEHHHHHHHHHHHH
RYGYRDDALKLADTFFQHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFF
HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RKQ
HCC
>Mature Secondary Structure
MKIKTILTPVACALLMSFSAHAANADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGA
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHCCCC
WHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVDFTLEAYSIPGALV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCCHHHH
QKLISKDVQVEMILRFATPRTSLLETKITSDKPLDLVWDGELLEKLEAKEGKPLSDKTIA
HHHHCCCCEEEEEEEECCCCHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCCCC
GEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
CCCCHHHHHHHHCCCCCEEEEHHHHEEEHHHHCCCCCEEHHHCCCEEEECCCCEEEEEEE
INGSTTLYTTYSHLLTAQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATP
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCH
EQTRVAVKAIETLNGNWRSPGGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNP
HHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHCCH
DIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAW
HHHHHCEEEEEEEEECCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHH
SVMEVYNVTQDKTWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
TVKKGDKEETRSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKY
EEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHH
VANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEA
HHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCHHH
KRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFN
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCHHHC
GAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
CCCCCCCCCEEEEEEECHHHCCCCCCCCHHHHCCCCCCCCEEECCEEEHHHHHHHHHHHH
RYGYRDDALKLADTFFQHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHLYMLYNDFF
HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RKQ
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]