Definition Escherichia coli UTI89 chromosome, complete genome.
Accession NC_007946
Length 5,065,741

Click here to switch to the map view.

The map label for this gene is ygjJ [H]

Identifier: 91212510

GI number: 91212510

Start: 3455600

End: 3456670

Strand: Direct

Name: ygjJ [H]

Synonym: UTI89_C3519

Alternate gene names: 91212510

Gene position: 3455600-3456670 (Clockwise)

Preceding gene: 91212509

Following gene: 91212511

Centisome position: 68.22

GC content: 52.01

Gene sequence:

>1071_bases
ATGAAATTAATCACTGCACCATGCAGAGCATTACTTGCGCTGCCGTTTTGCTACGCCTTTTCTGTTACCGCTGATGAAGC
ACGTCCGGCAGAACATGACGACACAAAAACCCCCGCAATGACCTCGACATCTTCTCCTTCATTTCGTTTTTACGGCGAAT
TAGGGGTTGGTGGGTATATGGATTTAGAGGGTGAGAATAAACATAAATACAGCGACGGCACCTATATTGAAGGTGGCCTG
GAGATGAAGTACGGCTCCTGGTTCGGCCTGATTTACGGCGAAGGCTGGACCGTGCAGGCCGACCACGACGGTAATGCCTG
GGTGCCTGACCATAGCTGGGGTGGTTTCGAAGGTGGGATTAACCGTTTCTATGGCGGTTATCGTACCAATGATGGCACCG
AAATCATGCTCAGTCTGCGTCAGGATTCCTCGCTGGATGACCTGCAATGGTGGGGCGATTTCACGCCCGATCTGGGCTAC
GTCATTCCCAATACCCGCGACATTATGACTGCGCTGAAGGTACAGAACTTAAGCGGCAACTTTCGTTATAGCGTTACCGC
CACACCTGCCGGACATCATGACGAAAGCAAAGCCTGGCTACATTTTGGCAAGTACGATCGCTACGACGACAAATACACCT
ATCCGGCAATGATGAACGGTTACATCCAGTATGACCTTGCAGAAGGTATCACCTGGATGAACGGTCTGGAAATCACCGAC
GGCACAGGCCAACTCTATCTCACGGGCCTGCTTACCCCTAACTTTGCCGCTCGCGCCTGGCACCATACCGGACGCGCCGA
CGGGCTGGACGTATCGGGAAGTGAAAGCGGGATGATGGTGAGCGCCATGTATGAAGCGTTAAAGGGCGTTTATCTCTCCA
CCGCTTACACCTACGCCAAACATCGCCCTGACCACGCTGACGATGAAACCACCTCTTTCATGCAGTTTGGTATCTGGTAC
GAATACGGCGGCGGACGTTTCGCAACGGCTTTTGATAGCCGCTTCTACATGAAAAATGCCTCTCACGATCCCAGCGACCA
ACTCTTCCTGATGCAATATTTTTACTGGTAA

Upstream 100 bases:

>100_bases
TCTTCCTGGATGGGGAGAGGGAAAATAGTTTCTGCCTTTATATTTTTATAATTACAACGATAAAAGGCTGTACTTTTTCT
TTAGCTCATGGATTAACACA

Downstream 100 bases:

>100_bases
TAAGGACAGTAATCTCATGAAAATAAAAACCATTTTAACGCCAGTAGCCTGTGCTCTGCTGATGAGCTTTTCCGCCCATG
CCGCTAACGCTGACAATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKLITAPCRALLALPFCYAFSVTADEARPAEHDDTKTPAMTSTSSPSFRFYGELGVGGYMDLEGENKHKYSDGTYIEGGL
EMKYGSWFGLIYGEGWTVQADHDGNAWVPDHSWGGFEGGINRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGY
VIPNTRDIMTALKVQNLSGNFRYSVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMMNGYIQYDLAEGITWMNGLEITD
GTGQLYLTGLLTPNFAARAWHHTGRADGLDVSGSESGMMVSAMYEALKGVYLSTAYTYAKHRPDHADDETTSFMQFGIWY
EYGGGRFATAFDSRFYMKNASHDPSDQLFLMQYFYW

Sequences:

>Translated_356_residues
MKLITAPCRALLALPFCYAFSVTADEARPAEHDDTKTPAMTSTSSPSFRFYGELGVGGYMDLEGENKHKYSDGTYIEGGL
EMKYGSWFGLIYGEGWTVQADHDGNAWVPDHSWGGFEGGINRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGY
VIPNTRDIMTALKVQNLSGNFRYSVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMMNGYIQYDLAEGITWMNGLEITD
GTGQLYLTGLLTPNFAARAWHHTGRADGLDVSGSESGMMVSAMYEALKGVYLSTAYTYAKHRPDHADDETTSFMQFGIWY
EYGGGRFATAFDSRFYMKNASHDPSDQLFLMQYFYW
>Mature_356_residues
MKLITAPCRALLALPFCYAFSVTADEARPAEHDDTKTPAMTSTSSPSFRFYGELGVGGYMDLEGENKHKYSDGTYIEGGL
EMKYGSWFGLIYGEGWTVQADHDGNAWVPDHSWGGFEGGINRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGY
VIPNTRDIMTALKVQNLSGNFRYSVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMMNGYIQYDLAEGITWMNGLEITD
GTGQLYLTGLLTPNFAARAWHHTGRADGLDVSGSESGMMVSAMYEALKGVYLSTAYTYAKHRPDHADDETTSFMQFGIWY
EYGGGRFATAFDSRFYMKNASHDPSDQLFLMQYFYW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789461, Length=356, Percent_Identity=98.0337078651685, Blast_Score=727, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40166; Mature: 40166

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLITAPCRALLALPFCYAFSVTADEARPAEHDDTKTPAMTSTSSPSFRFYGELGVGGYM
CCEECHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCEEE
DLEGENKHKYSDGTYIEGGLEMKYGSWFGLIYGEGWTVQADHDGNAWVPDHSWGGFEGGI
ECCCCCCCCCCCCCEEECCEEEECCCEEEEEECCCEEEEECCCCCEECCCCCCCCCCCCH
NRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGYVIPNTRDIMTALKVQNLSGN
HHHCCCEECCCCCEEEEEECCCCCCCHHHHCCCCCCCCCEECCCHHHHHHHHEEECCCCC
FRYSVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMMNGYIQYDLAEGITWMNGLEITD
EEEEEEECCCCCCCCCCEEEEECCCCCCCCCEECHHHHCCEEEEEHHHCCEECCCEEEEC
GTGQLYLTGLLTPNFAARAWHHTGRADGLDVSGSESGMMVSAMYEALKGVYLSTAYTYAK
CCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCEEHHHHHHHHH
HRPDHADDETTSFMQFGIWYEYGGGRFATAFDSRFYMKNASHDPSDQLFLMQYFYW
CCCCCCCCHHHHHEEEEEEEEECCCEEEEEECCEEEECCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MKLITAPCRALLALPFCYAFSVTADEARPAEHDDTKTPAMTSTSSPSFRFYGELGVGGYM
CCEECHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCEEE
DLEGENKHKYSDGTYIEGGLEMKYGSWFGLIYGEGWTVQADHDGNAWVPDHSWGGFEGGI
ECCCCCCCCCCCCCEEECCEEEECCCEEEEEECCCEEEEECCCCCEECCCCCCCCCCCCH
NRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWGDFTPDLGYVIPNTRDIMTALKVQNLSGN
HHHCCCEECCCCCEEEEEECCCCCCCHHHHCCCCCCCCCEECCCHHHHHHHHEEECCCCC
FRYSVTATPAGHHDESKAWLHFGKYDRYDDKYTYPAMMNGYIQYDLAEGITWMNGLEITD
EEEEEEECCCCCCCCCCEEEEECCCCCCCCCEECHHHHCCEEEEEHHHCCEECCCEEEEC
GTGQLYLTGLLTPNFAARAWHHTGRADGLDVSGSESGMMVSAMYEALKGVYLSTAYTYAK
CCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHCEEHHHHHHHHH
HRPDHADDETTSFMQFGIWYEYGGGRFATAFDSRFYMKNASHDPSDQLFLMQYFYW
CCCCCCCCHHHHHEEEEEEEEECCCEEEEEECCEEEECCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]