Definition | Escherichia coli UTI89 chromosome, complete genome. |
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Accession | NC_007946 |
Length | 5,065,741 |
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The map label for this gene is ygeZ [H]
Identifier: 91212251
GI number: 91212251
Start: 3188862
End: 3190259
Strand: Direct
Name: ygeZ [H]
Synonym: UTI89_C3258
Alternate gene names: 91212251
Gene position: 3188862-3190259 (Clockwise)
Preceding gene: 91212250
Following gene: 91212252
Centisome position: 62.95
GC content: 52.65
Gene sequence:
>1398_bases TTGGAGTTTGCTATGCGCGTATTGATAAAAAACGGCATTGTTGTTAATGCAGATGGACAGGCGAAGCAGGATTTGCTGAT TGAAAGCGGGATTGTTCGCCAGTTGGGTACCGATATTTCGCCGCAACTCCCTTGCGAAGAAATTGATGCCTCTGGCTGTT ACGTTTTCCCTGGCGGCGTGGATGTCCATACGCATTTCAATATTGATGTCGGCATCGCGCGCAGTTGTGATGATTTTTTT ACCGGTACCCGCGCTGCTGCGTGTGGCGGTACAACAACCATTATTGACCATATGGGATTTGGCCCAAATGGCTGCCGGTT ACGCCATCAACTGGAAGTTTATCGCGGTTATGCCGCCCACAAAGCAGTCATCGACTACAGCTTTCACGGTGTCATTCAAC ATATTAATCACGCTATCCTCGACGAAATTCCGATGATGGTTGAGGAAGGACTGAGCAGTTTTAAACTCTATTTAACCTAT CAATATAAACTCAACGATGATGAAGTGTTGCAGGCATTACGCCGCTTGCATGAGTCCGGCGCGCTGACCACCGTACACCC GGAAAATGACGCAGCTATCGCCAGCAAGCGGGCGGAGTTTATCGCCGCAGGGTTAACCGCGCCGCGTTATCATGCCTTGA GTCGACCTCTGGAATGCGAAGCGGAAGCCATCGCCCGCATGATTAACCTGGCACAAATTGCCGGTAACGCCCCGCTCTAT ATCGTGCACCTGTCTAACGGCTTAGGTCTGGATTATCTGCGTCTTGCCCGTGCGAATCACCAGCCAGTCTGGGTTGAAAC CTGCCCACAATATCTCCTGTTGGACGAACGCAGTTACGATACAGAAGATGGCATGAAGTTCATTCTTAGCCCACCGCTGC GTAACGTACGCGAGCAGGACAAACTGTGGTGTGGCATCAGCGATGGTGCGATTGACGTGGTGGCAACCGATCACTGCACC TTCTCGATGGCTCAACGCCTGCAAATTTCTAAAGGCGATTTCAGCCGCTGCCCAAATGGCTTACCCGGTGTGGAGAACCG CATGCAACTGCTGTTCTCCAGTGGCGTGATGACGGGACGTATCTCACTGGAGCGTTTTGTTGAGTTAACCAGTGCAATGC CCGCCAGGCTGTTTGGCCTGTGGCCGCAAAAAGGGATATTAGCGCCCGGTTCCGATGGTGACGTGGTGATTATCGACCCA CGTCAGAGCCAACAAATTCAGCATCGCCATCTCCACGACAACGCCGACTACTCGCCCTGGGAGGGGTTTACCTGTCAGGG CGCGATTGTCAGAACATTATCCCGTGGTGAAACGATTTTCTGCGACGGCACCTTTACAGGCAAAGCCGGGCGAGGTCGTT TCCTGCGACGCAAACCGTTTGTCCCTCCCGTGCTCTAA
Upstream 100 bases:
>100_bases CTGGTAACCTGTGCCGCTATGTACGCTGCAATCCCATTAAGCTGGCTGGCAACCGAATAATTACTCTTCACTTATCCCCC TCCGGTTCGCCGGAGGGTTT
Downstream 100 bases:
>100_bases CCACTGCCAGGGATCTATACACAATCAAGAATGATGAGTGAGGAAAAATGAGTAAGAAAATTGTTCTCGCCCTGGGCGGG AATGCGCTGGGCGATGACCT
Product: phenylhydantoinase
Products: NA
Alternate protein names: Hydantoin-utilizing enzyme hyuA [H]
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MEFAMRVLIKNGIVVNADGQAKQDLLIESGIVRQLGTDISPQLPCEEIDASGCYVFPGGVDVHTHFNIDVGIARSCDDFF TGTRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVIDYSFHGVIQHINHAILDEIPMMVEEGLSSFKLYLTY QYKLNDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLAQIAGNAPLY IVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCT FSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRISLERFVELTSAMPARLFGLWPQKGILAPGSDGDVVIIDP RQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCDGTFTGKAGRGRFLRRKPFVPPVL
Sequences:
>Translated_465_residues MEFAMRVLIKNGIVVNADGQAKQDLLIESGIVRQLGTDISPQLPCEEIDASGCYVFPGGVDVHTHFNIDVGIARSCDDFF TGTRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVIDYSFHGVIQHINHAILDEIPMMVEEGLSSFKLYLTY QYKLNDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLAQIAGNAPLY IVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCT FSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRISLERFVELTSAMPARLFGLWPQKGILAPGSDGDVVIIDP RQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCDGTFTGKAGRGRFLRRKPFVPPVL >Mature_465_residues MEFAMRVLIKNGIVVNADGQAKQDLLIESGIVRQLGTDISPQLPCEEIDASGCYVFPGGVDVHTHFNIDVGIARSCDDFF TGTRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAHKAVIDYSFHGVIQHINHAILDEIPMMVEEGLSSFKLYLTY QYKLNDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLAQIAGNAPLY IVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCT FSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGRISLERFVELTSAMPARLFGLWPQKGILAPGSDGDVVIIDP RQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCDGTFTGKAGRGRFLRRKPFVPPVL
Specific function: Catalyzes the stereospecific hydrolysis of the cyclic amide bond of D-hydantoin derivatives with an aromatic side chains at the 5'-position. Has no activity on dihydropyrimidines. The physiological function is unknown [H]
COG id: COG0044
COG function: function code F; Dihydroorotase and related cyclic amidohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503375, Length=471, Percent_Identity=36.7303609341826, Blast_Score=297, Evalue=1e-80, Organism=Homo sapiens, GI4503379, Length=462, Percent_Identity=34.8484848484849, Blast_Score=277, Evalue=1e-74, Organism=Homo sapiens, GI4503377, Length=462, Percent_Identity=35.2813852813853, Blast_Score=277, Evalue=2e-74, Organism=Homo sapiens, GI4503051, Length=462, Percent_Identity=35.2813852813853, Blast_Score=274, Evalue=1e-73, Organism=Homo sapiens, GI62422571, Length=462, Percent_Identity=35.2813852813853, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI19923821, Length=464, Percent_Identity=34.051724137931, Blast_Score=264, Evalue=1e-70, Organism=Homo sapiens, GI190194363, Length=462, Percent_Identity=33.982683982684, Blast_Score=261, Evalue=7e-70, Organism=Homo sapiens, GI18105007, Length=405, Percent_Identity=24.1975308641975, Blast_Score=90, Evalue=4e-18, Organism=Escherichia coli, GI87082175, Length=461, Percent_Identity=98.0477223427332, Blast_Score=941, Evalue=0.0, Organism=Escherichia coli, GI1786722, Length=448, Percent_Identity=30.1339285714286, Blast_Score=174, Evalue=1e-44, Organism=Caenorhabditis elegans, GI71989490, Length=467, Percent_Identity=35.5460385438972, Blast_Score=268, Evalue=4e-72, Organism=Caenorhabditis elegans, GI17539558, Length=463, Percent_Identity=35.2051835853132, Blast_Score=261, Evalue=7e-70, Organism=Caenorhabditis elegans, GI86575075, Length=473, Percent_Identity=28.3298097251586, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI193204318, Length=459, Percent_Identity=24.1830065359477, Blast_Score=100, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6322218, Length=423, Percent_Identity=28.1323877068558, Blast_Score=130, Evalue=4e-31, Organism=Drosophila melanogaster, GI221377917, Length=481, Percent_Identity=35.7588357588358, Blast_Score=265, Evalue=6e-71, Organism=Drosophila melanogaster, GI17137462, Length=468, Percent_Identity=35.6837606837607, Blast_Score=262, Evalue=5e-70, Organism=Drosophila melanogaster, GI24644287, Length=310, Percent_Identity=36.7741935483871, Blast_Score=169, Evalue=6e-42, Organism=Drosophila melanogaster, GI24644289, Length=235, Percent_Identity=39.1489361702128, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI24642586, Length=408, Percent_Identity=25.4901960784314, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI18859883, Length=461, Percent_Identity=24.295010845987, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011778 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: 3.-.-.- [C]
Molecular weight: Translated: 51450; Mature: 51450
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFAMRVLIKNGIVVNADGQAKQDLLIESGIVRQLGTDISPQLPCEEIDASGCYVFPGGV CCHHHEEHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEECCCE DVHTHFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAH EEEEEEEEEEECCCCCHHHHCCCCHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHCHHHH KAVIDYSFHGVIQHINHAILDEIPMMVEEGLSSFKLYLTYQYKLNDDEVLQALRRLHESG HEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHHCC ALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLAQIAGNAPLY CEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEE IVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQD EEECCCCCCHHHHHHHHCCCCEEEHCCCCCEEEEECCCCCCCCCCEEEECCCHHHHHHHC KLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGR CEEEEECCCEEEEEEECCHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHCCCEEEE ISLERFVELTSAMPARLFGLWPQKGILAPGSDGDVVIIDPRQSQQIQHRHLHDNADYSPW HHHHHHHHHHHCCHHHHHCCCCCCCEECCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCC EGFTCQGAIVRTLSRGETIFCDGTFTGKAGRGRFLRRKPFVPPVL CCCEECHHHHHHHCCCCEEEECCEECCCCCCCCCEECCCCCCCCC >Mature Secondary Structure MEFAMRVLIKNGIVVNADGQAKQDLLIESGIVRQLGTDISPQLPCEEIDASGCYVFPGGV CCHHHEEHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCEEECCCE DVHTHFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHMGFGPNGCRLRHQLEVYRGYAAH EEEEEEEEEEECCCCCHHHHCCCCHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHCHHHH KAVIDYSFHGVIQHINHAILDEIPMMVEEGLSSFKLYLTYQYKLNDDEVLQALRRLHESG HEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHHCC ALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAEAIARMINLAQIAGNAPLY CEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEE IVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYDTEDGMKFILSPPLRNVREQD EEECCCCCCHHHHHHHHCCCCEEEHCCCCCEEEEECCCCCCCCCCEEEECCCHHHHHHHC KLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCPNGLPGVENRMQLLFSSGVMTGR CEEEEECCCEEEEEEECCHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHCCCEEEE ISLERFVELTSAMPARLFGLWPQKGILAPGSDGDVVIIDPRQSQQIQHRHLHDNADYSPW HHHHHHHHHHHCCHHHHHCCCCCCCEECCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCC EGFTCQGAIVRTLSRGETIFCDGTFTGKAGRGRFLRRKPFVPPVL CCCEECHHHHHHHCCCCEEEECCEECCCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA