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The map label for this gene is 89885892

Identifier: 89885892

GI number: 89885892

Start: 173316

End: 173945

Strand: Reverse

Name: 89885892

Synonym: Rfer_4406

Alternate gene names: NA

Gene position: 173945-173316 (Counterclockwise)

Preceding gene: 89885893

Following gene: 89885891

Centisome position: 67.57

GC content: 57.3

Gene sequence:

>630_bases
ATGAATGCCCAACACGCATCCATGATCGACCGCTTTCTGGCAACAGACTGCCCGGTCATCACCATGCCTCACGACAGTGA
GGTATTTGAACCCCTGAAGACCCCTGGCCACCGACTCATCGTCGCGGCAGGAGGGCTTTACAAAGAAATCCGCCGCGCCT
GGCTTCATGCGATCGTCCATGTGGCGCGCGCACAGACCCCCTTTGGCGAGCTGCAGACCACGCTCAGCATGCCATTCCAG
GTGCCGGAAAACTTGCTTGTCGAATTTCTGCATCAAGCCAGAGCCGCCGCGCCCAACGAAACGGCGGCCTGGATCGTCTT
CAATGAAGGGGACAGGTCGCTTCGGCTCCTTCCCATGGAATACGACGGGGTTACCCCGGTGCACCTGAGCATTCTGCGGC
CCATGCTCGCCGCTGGCGAGCACCTGGTGGTGGACCTGCACAGTCATCACCAAATGTCAGCGTATTTCAGCCGTACCGAC
GACGCGGATGACATCGCAAGCAACGAAGTCAAGATCGCCGGCGTTGTCGGCACCATCCACCAAAATCCGACCTGGAATTT
CAGGATGTGTCTGGAAGGAGTGCTGATGCCTGATTTTCTGAAACTCTTACGTTTGAAAGAATTGCCATGA

Upstream 100 bases:

>100_bases
CTCACGCTGCACACCACCCTGTGCAGCCTATCAAAAACCCGCCATGGGGATACGTCCCCATGGGTCGCGTCTACCTTGCA
TTTGCAATCAAAGGATAAAG

Downstream 100 bases:

>100_bases
GCACCTACAAAATACCCTCTGCGTTTCTCGCAAAGCCGGTCAACGTGGCGGTGATCGGAGCGGGCGGTACCGGCTCGGCC
GTGATCGCCTGTCTGGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MNAQHASMIDRFLATDCPVITMPHDSEVFEPLKTPGHRLIVAAGGLYKEIRRAWLHAIVHVARAQTPFGELQTTLSMPFQ
VPENLLVEFLHQARAAAPNETAAWIVFNEGDRSLRLLPMEYDGVTPVHLSILRPMLAAGEHLVVDLHSHHQMSAYFSRTD
DADDIASNEVKIAGVVGTIHQNPTWNFRMCLEGVLMPDFLKLLRLKELP

Sequences:

>Translated_209_residues
MNAQHASMIDRFLATDCPVITMPHDSEVFEPLKTPGHRLIVAAGGLYKEIRRAWLHAIVHVARAQTPFGELQTTLSMPFQ
VPENLLVEFLHQARAAAPNETAAWIVFNEGDRSLRLLPMEYDGVTPVHLSILRPMLAAGEHLVVDLHSHHQMSAYFSRTD
DADDIASNEVKIAGVVGTIHQNPTWNFRMCLEGVLMPDFLKLLRLKELP
>Mature_209_residues
MNAQHASMIDRFLATDCPVITMPHDSEVFEPLKTPGHRLIVAAGGLYKEIRRAWLHAIVHVARAQTPFGELQTTLSMPFQ
VPENLLVEFLHQARAAAPNETAAWIVFNEGDRSLRLLPMEYDGVTPVHLSILRPMLAAGEHLVVDLHSHHQMSAYFSRTD
DADDIASNEVKIAGVVGTIHQNPTWNFRMCLEGVLMPDFLKLLRLKELP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23444; Mature: 23444

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAQHASMIDRFLATDCPVITMPHDSEVFEPLKTPGHRLIVAAGGLYKEIRRAWLHAIVH
CCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHH
VARAQTPFGELQTTLSMPFQVPENLLVEFLHQARAAAPNETAAWIVFNEGDRSLRLLPME
HHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEC
YDGVTPVHLSILRPMLAAGEHLVVDLHSHHQMSAYFSRTDDADDIASNEVKIAGVVGTIH
CCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCHHHHCCCCEEEEEEEEEEC
QNPTWNFRMCLEGVLMPDFLKLLRLKELP
CCCCCHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNAQHASMIDRFLATDCPVITMPHDSEVFEPLKTPGHRLIVAAGGLYKEIRRAWLHAIVH
CCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHH
VARAQTPFGELQTTLSMPFQVPENLLVEFLHQARAAAPNETAAWIVFNEGDRSLRLLPME
HHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEC
YDGVTPVHLSILRPMLAAGEHLVVDLHSHHQMSAYFSRTDDADDIASNEVKIAGVVGTIH
CCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCHHHHCCCCEEEEEEEEEEC
QNPTWNFRMCLEGVLMPDFLKLLRLKELP
CCCCCHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA