Click here to switch to the map view.

The map label for this gene is 89885891

Identifier: 89885891

GI number: 89885891

Start: 172522

End: 173319

Strand: Reverse

Name: 89885891

Synonym: Rfer_4405

Alternate gene names: NA

Gene position: 173319-172522 (Counterclockwise)

Preceding gene: 89885892

Following gene: 89885890

Centisome position: 67.32

GC content: 56.77

Gene sequence:

>798_bases
ATGAGCACCTACAAAATACCCTCTGCGTTTCTCGCAAAGCCGGTCAACGTGGCGGTGATCGGAGCGGGCGGTACCGGCTC
GGCCGTGATCGCCTGTCTGGCGCAAATGTGCGTCGCGCTGGAAGCCCTTGGGGCTCCGGGGCTTGATGTCACGGTCATTG
ATGATGACCGGGTGAGTCCGGCCAACATCGGCCGTCAAGCTTTTGCCCCCTGCGACGTCGGGCAATTCAAGGCCAGCGTG
CTGGTCAACCGTGTCAATCAGACTTTCGGGTTGGATTGGGATGCGAAAAATGAACGCCTGGCTGTTCTGCCTGCCCGTCA
CAACTACGACATGCCAAGAATTTACATTGGCTGTGTGGATACCCGAAAAGCCCGACAAGCCATTAAATCCCATTGGGAAG
CAAGCTCTAATAGCGGGTTCAATGGAACAGCCTGGTGGCTCGATTGCGGAAATACGGCCCATTCCGGGCAGGTCATTCTT
GGCGTTCTAACTGAAGGGGTGGTAGAGTTGCCGAGCGCGGGCCACCTCTTTCCGGAGATGGTAGATGCAAGCCTTGATGC
CAGCGATGACATGCCCAGCTGTTCACTGCCTGAGGCGCTGGCCAAGCAAGACCTGTTCACGAATCGGACCATTGCAGATA
CAGCCATGAATTTGCTGTGGAAGCTGTTTCGCTACGGGGAAACGGATGTCCATGGGGCGTTTGTGAACCTGCAGACGATG
CGCACCAACCCGTTGCCTATCGATCCCATCGCTTGGGCACGCATGGGTTATGCGGCTGAGGTGGAAGAAGAAGCATGA

Upstream 100 bases:

>100_bases
TCGGCACCATCCACCAAAATCCGACCTGGAATTTCAGGATGTGTCTGGAAGGAGTGCTGATGCCTGATTTTCTGAAACTC
TTACGTTTGAAAGAATTGCC

Downstream 100 bases:

>100_bases
GGATTTGAACCATGGCAAACGCTCAACACCGGTACCGAACATTTCCGGTCCGTTGAGCGCGGCATCTGGGCTATTGCCTG
ATTGTCCAAATAGCCCTCAA

Product: UBA/THIF-type NAD/FAD binding fold

Products: NA

Alternate protein names: ThiF Family Protein Ubiquitin-Activating; Dinucleotide-Utilizing; ThiF/MoeB/HesA Family Protein

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSTYKIPSAFLAKPVNVAVIGAGGTGSAVIACLAQMCVALEALGAPGLDVTVIDDDRVSPANIGRQAFAPCDVGQFKASV
LVNRVNQTFGLDWDAKNERLAVLPARHNYDMPRIYIGCVDTRKARQAIKSHWEASSNSGFNGTAWWLDCGNTAHSGQVIL
GVLTEGVVELPSAGHLFPEMVDASLDASDDMPSCSLPEALAKQDLFTNRTIADTAMNLLWKLFRYGETDVHGAFVNLQTM
RTNPLPIDPIAWARMGYAAEVEEEA

Sequences:

>Translated_265_residues
MSTYKIPSAFLAKPVNVAVIGAGGTGSAVIACLAQMCVALEALGAPGLDVTVIDDDRVSPANIGRQAFAPCDVGQFKASV
LVNRVNQTFGLDWDAKNERLAVLPARHNYDMPRIYIGCVDTRKARQAIKSHWEASSNSGFNGTAWWLDCGNTAHSGQVIL
GVLTEGVVELPSAGHLFPEMVDASLDASDDMPSCSLPEALAKQDLFTNRTIADTAMNLLWKLFRYGETDVHGAFVNLQTM
RTNPLPIDPIAWARMGYAAEVEEEA
>Mature_264_residues
STYKIPSAFLAKPVNVAVIGAGGTGSAVIACLAQMCVALEALGAPGLDVTVIDDDRVSPANIGRQAFAPCDVGQFKASVL
VNRVNQTFGLDWDAKNERLAVLPARHNYDMPRIYIGCVDTRKARQAIKSHWEASSNSGFNGTAWWLDCGNTAHSGQVILG
VLTEGVVELPSAGHLFPEMVDASLDASDDMPSCSLPEALAKQDLFTNRTIADTAMNLLWKLFRYGETDVHGAFVNLQTMR
TNPLPIDPIAWARMGYAAEVEEEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28511; Mature: 28379

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTYKIPSAFLAKPVNVAVIGAGGTGSAVIACLAQMCVALEALGAPGLDVTVIDDDRVSP
CCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCH
ANIGRQAFAPCDVGQFKASVLVNRVNQTFGLDWDAKNERLAVLPARHNYDMPRIYIGCVD
HHCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEECC
TRKARQAIKSHWEASSNSGFNGTAWWLDCGNTAHSGQVILGVLTEGVVELPSAGHLFPEM
CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHCCCCCCCCHHH
VDASLDASDDMPSCSLPEALAKQDLFTNRTIADTAMNLLWKLFRYGETDVHGAFVNLQTM
HHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEE
RTNPLPIDPIAWARMGYAAEVEEEA
ECCCCCCCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
STYKIPSAFLAKPVNVAVIGAGGTGSAVIACLAQMCVALEALGAPGLDVTVIDDDRVSP
CCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCH
ANIGRQAFAPCDVGQFKASVLVNRVNQTFGLDWDAKNERLAVLPARHNYDMPRIYIGCVD
HHCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEECC
TRKARQAIKSHWEASSNSGFNGTAWWLDCGNTAHSGQVILGVLTEGVVELPSAGHLFPEM
CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHCCCCCCCCHHH
VDASLDASDDMPSCSLPEALAKQDLFTNRTIADTAMNLLWKLFRYGETDVHGAFVNLQTM
HHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEE
RTNPLPIDPIAWARMGYAAEVEEEA
ECCCCCCCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA