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The map label for this gene is 89885865

Identifier: 89885865

GI number: 89885865

Start: 143560

End: 144132

Strand: Reverse

Name: 89885865

Synonym: Rfer_4379

Alternate gene names: NA

Gene position: 144132-143560 (Counterclockwise)

Preceding gene: 89885866

Following gene: 89885863

Centisome position: 55.99

GC content: 56.2

Gene sequence:

>573_bases
ATGACATTGCGTGCCGTACCACCCACAACCAGTCGGCTGATTGTCAAACGTGGCGGTAGCGCCATCACAAGCAAAATCCC
TAAACCGGTGGTGCTGGTCGACACACGAGAGCAGCAGCCGTTCACATTTGAGCGGTTCCCAAATTGGATCGCCAGCGAGC
GCCGGACAACCCTGCCCACCGGGGACTACAGCATCCTTGACATGGAGCATCTGGTGGCGCTGGAACGCAAATCACTCCCG
GACCTGATTGGCACCTTGATGCACAACCGTCAGCGTTTTTTTCGGGAATGTGAGCGTTTGACCACATTCCGCTGGCGCGC
GTTGCTGGTCGAAGCGTCCTACCACGACGTCAAGTCGCCCTATGTCAATTGCGAATACACATCAGCCGCCCCGAACGGGG
TCAGCGGCACGCTCGATGCCCTGGAAGTTAAATTTGGCATACCCGTCATCTACGCATCAAAACACCGCGCATTGGCGGAG
GAAAAAACAGCTTCCTGGCTCAGCAAGCTGTACACGTACTGGTGGCTTGAAGAAAATGGCATGGGGCGCGTTCTGCAGGA
AGGCGATTTATAG

Upstream 100 bases:

>100_bases
TTGTTTTTGCCACTTGATCAGTTCAAGGCTACACCAGTAGAAAATCGCTGCAAAGAGTGCGCAACGCGAATTACTGAACC
GAAATCCTGAGGGAAGACTC

Downstream 100 bases:

>100_bases
GCCAACGCCAGCACGCGACGCCAGCGGGCTCAGAATGGACGCATCAATGGGCGTGCCCGCTGTCATTGTCGACCACCACT
TGGGACATGGCGGCCGACAA

Product: ERCC4

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MTLRAVPPTTSRLIVKRGGSAITSKIPKPVVLVDTREQQPFTFERFPNWIASERRTTLPTGDYSILDMEHLVALERKSLP
DLIGTLMHNRQRFFRECERLTTFRWRALLVEASYHDVKSPYVNCEYTSAAPNGVSGTLDALEVKFGIPVIYASKHRALAE
EKTASWLSKLYTYWWLEENGMGRVLQEGDL

Sequences:

>Translated_190_residues
MTLRAVPPTTSRLIVKRGGSAITSKIPKPVVLVDTREQQPFTFERFPNWIASERRTTLPTGDYSILDMEHLVALERKSLP
DLIGTLMHNRQRFFRECERLTTFRWRALLVEASYHDVKSPYVNCEYTSAAPNGVSGTLDALEVKFGIPVIYASKHRALAE
EKTASWLSKLYTYWWLEENGMGRVLQEGDL
>Mature_189_residues
TLRAVPPTTSRLIVKRGGSAITSKIPKPVVLVDTREQQPFTFERFPNWIASERRTTLPTGDYSILDMEHLVALERKSLPD
LIGTLMHNRQRFFRECERLTTFRWRALLVEASYHDVKSPYVNCEYTSAAPNGVSGTLDALEVKFGIPVIYASKHRALAEE
KTASWLSKLYTYWWLEENGMGRVLQEGDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21762; Mature: 21631

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRAVPPTTSRLIVKRGGSAITSKIPKPVVLVDTREQQPFTFERFPNWIASERRTTLPT
CCCCCCCCCCCEEEEECCCCHHHHCCCCCEEEEECCCCCCEEHHHCCHHHHCCCCCCCCC
GDYSILDMEHLVALERKSLPDLIGTLMHNRQRFFRECERLTTFRWRALLVEASYHDVKSP
CCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHCCCC
YVNCEYTSAAPNGVSGTLDALEVKFGIPVIYASKHRALAEEKTASWLSKLYTYWWLEENG
EECEEECCCCCCCCCCCHHHEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHEEEECCCC
MGRVLQEGDL
CCCCCCCCCC
>Mature Secondary Structure 
TLRAVPPTTSRLIVKRGGSAITSKIPKPVVLVDTREQQPFTFERFPNWIASERRTTLPT
CCCCCCCCCCEEEEECCCCHHHHCCCCCEEEEECCCCCCEEHHHCCHHHHCCCCCCCCC
GDYSILDMEHLVALERKSLPDLIGTLMHNRQRFFRECERLTTFRWRALLVEASYHDVKSP
CCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHCCCC
YVNCEYTSAAPNGVSGTLDALEVKFGIPVIYASKHRALAEEKTASWLSKLYTYWWLEENG
EECEEECCCCCCCCCCCHHHEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHEEEECCCC
MGRVLQEGDL
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA