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The map label for this gene is 89885844

Identifier: 89885844

GI number: 89885844

Start: 122104

End: 123726

Strand: Reverse

Name: 89885844

Synonym: Rfer_4358

Alternate gene names: NA

Gene position: 123726-122104 (Counterclockwise)

Preceding gene: 89885845

Following gene: 89885842

Centisome position: 48.06

GC content: 55.27

Gene sequence:

>1623_bases
ATGGAAAACATCAGACCAATGCCCGATGCACGGGCCAACAGCGGATACGAATTGACTCTGCCCAATGGGGCAACCGAGAG
CTTCAACACGCTGGGCGACGTCTTGTATCGCATGAATCAAAAGCCTGCCGCCGGGGCTGAAAGCCTTTATGGCAAAGCGG
ACCGGATGGAAGTCTGCTCACCTGCAGGCAAGATCTATTTCGTTGAACAACGGTACAGCGAGCTTGGAATTCGCATGCCA
CCGGGGCAAGGCCACGTCCAGGACATCATGAACCGGATGTTGGTCGAGGTCATGCCGTACGCCCAGGGCGATCTGGGCAC
GATCAAGGCACCTTGGCAGATGACCGCTTCACAGTGGGGCGCCATCAACGCAATCGGCAAAGTGGCCTATGGGGTATATC
CCTGCCTTTCTGACGAACATCGCAAACAGTCCTGCGTCACGCGCGACGGAAATCAACACGATGTGGTTGACTACGTCAAT
TCAGAATTCATAGTGCGGCTTGGCTACGGCCACAATGGGCCGCTGTATGACGGACAACAAACCAACAGTCGACACGAGAT
ACATGTCGCCTACGCGTTGGCGCGCGGGGACACCGTCCCAGAGCATGTGCTGGCCGAGTACCAGGACGAAGAGAAGGTTA
ATGCCTTCAGTGGTCTTCACTGGTTTTCGACTCTGCTGAAGAAGCCGTACCTCCGGGGACGGATCTCCGCCGACAGACTT
TCCCAATTGGTGACACTGCTGAATTCAGATCGTCCCCATGTCCATGAAATCACGGTTGAAAACGCACCGTTCTTCATTGG
GCTGATGAACAGCTTGCCAGCAGAGGCAACCTCCGTGGATTTCGACAATCTGTTGTACGAAAAAGGTGTGCTGCATGTCC
GGCCGATGCCGGTGCCCGCACAGGAGCCCAACATTGGCGTTCCGGTCAATGCGTTTGCAACTGAACTGCGCAAGATGCAA
GTTGAGAAGCGAAAAAGGACTCAATCGAAGCACATTGAAGAGCAGATGGCAAAGCGAAATATGACCCTGCGAGAAATGCA
TTACCAGTTGAAACTGGTTGAAGGCATTGATACGTGGGAAACCCATAATTGGGCCAACCGGGTCGCGCAAGCGGTCGAAA
GCAAAAATCTGGTCGTTCTGCTTGACGTCCTAGACGGTCCGAGCAACGACACGACCAAACGCGCCATCGAAAAGTTCTAC
CCTGTGAAGCTGCTGAATGTATCGGCGGCCAAGCGGCGGCGAGCAATATTCGCGCTCGCAGGGCATGTGACCGATGAACA
TTACGCAGTGGCCGAAGCGGCTTACAAGGCCGAACGAAAAGCGACGGCTGAAGCCCAGGAAGCCGAAAAGGAGCGCAAGC
GCAATGAAACCCGCCTTGAAGACACCAGGGCGGTCGCCACCGGTACCAACTACCGGGTAAACGGGGTGGCGATGAACGGC
GCTGAGTTCGTCGAAAAAATCATTCGGGAAGGGTACACCCAGCTCGATGCGCGCAAGCGCGGGGCGGTTGCTCAATCCAT
CCTTCGCAACCCGCAAACAAGCAGCTTTTACAAGCTCAAACGAAAAGACGGAACGCTGGACTACGCAGAAGTGTTGCTCG
AAAAGGAAACCGCTGCAGCCTGA

Upstream 100 bases:

>100_bases
TAGCTCAACAAAGCATCTGCCTCATCCGGTAATTTTCAATCCCAACGGGACCACCTCCCGTTGGGCTGGTGGTCCCGTTT
TCATTACCACCGAAGAAAAT

Downstream 100 bases:

>100_bases
TATGGCCGCACATTTTTAAGATCAAACCCACCAACGCCATGCGTCGGTGGGTTTTTTTTCGCCCCTCGCAAACAGGCTAA
ATGAGCCCACCCCTCGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MENIRPMPDARANSGYELTLPNGATESFNTLGDVLYRMNQKPAAGAESLYGKADRMEVCSPAGKIYFVEQRYSELGIRMP
PGQGHVQDIMNRMLVEVMPYAQGDLGTIKAPWQMTASQWGAINAIGKVAYGVYPCLSDEHRKQSCVTRDGNQHDVVDYVN
SEFIVRLGYGHNGPLYDGQQTNSRHEIHVAYALARGDTVPEHVLAEYQDEEKVNAFSGLHWFSTLLKKPYLRGRISADRL
SQLVTLLNSDRPHVHEITVENAPFFIGLMNSLPAEATSVDFDNLLYEKGVLHVRPMPVPAQEPNIGVPVNAFATELRKMQ
VEKRKRTQSKHIEEQMAKRNMTLREMHYQLKLVEGIDTWETHNWANRVAQAVESKNLVVLLDVLDGPSNDTTKRAIEKFY
PVKLLNVSAAKRRRAIFALAGHVTDEHYAVAEAAYKAERKATAEAQEAEKERKRNETRLEDTRAVATGTNYRVNGVAMNG
AEFVEKIIREGYTQLDARKRGAVAQSILRNPQTSSFYKLKRKDGTLDYAEVLLEKETAAA

Sequences:

>Translated_540_residues
MENIRPMPDARANSGYELTLPNGATESFNTLGDVLYRMNQKPAAGAESLYGKADRMEVCSPAGKIYFVEQRYSELGIRMP
PGQGHVQDIMNRMLVEVMPYAQGDLGTIKAPWQMTASQWGAINAIGKVAYGVYPCLSDEHRKQSCVTRDGNQHDVVDYVN
SEFIVRLGYGHNGPLYDGQQTNSRHEIHVAYALARGDTVPEHVLAEYQDEEKVNAFSGLHWFSTLLKKPYLRGRISADRL
SQLVTLLNSDRPHVHEITVENAPFFIGLMNSLPAEATSVDFDNLLYEKGVLHVRPMPVPAQEPNIGVPVNAFATELRKMQ
VEKRKRTQSKHIEEQMAKRNMTLREMHYQLKLVEGIDTWETHNWANRVAQAVESKNLVVLLDVLDGPSNDTTKRAIEKFY
PVKLLNVSAAKRRRAIFALAGHVTDEHYAVAEAAYKAERKATAEAQEAEKERKRNETRLEDTRAVATGTNYRVNGVAMNG
AEFVEKIIREGYTQLDARKRGAVAQSILRNPQTSSFYKLKRKDGTLDYAEVLLEKETAAA
>Mature_540_residues
MENIRPMPDARANSGYELTLPNGATESFNTLGDVLYRMNQKPAAGAESLYGKADRMEVCSPAGKIYFVEQRYSELGIRMP
PGQGHVQDIMNRMLVEVMPYAQGDLGTIKAPWQMTASQWGAINAIGKVAYGVYPCLSDEHRKQSCVTRDGNQHDVVDYVN
SEFIVRLGYGHNGPLYDGQQTNSRHEIHVAYALARGDTVPEHVLAEYQDEEKVNAFSGLHWFSTLLKKPYLRGRISADRL
SQLVTLLNSDRPHVHEITVENAPFFIGLMNSLPAEATSVDFDNLLYEKGVLHVRPMPVPAQEPNIGVPVNAFATELRKMQ
VEKRKRTQSKHIEEQMAKRNMTLREMHYQLKLVEGIDTWETHNWANRVAQAVESKNLVVLLDVLDGPSNDTTKRAIEKFY
PVKLLNVSAAKRRRAIFALAGHVTDEHYAVAEAAYKAERKATAEAQEAEKERKRNETRLEDTRAVATGTNYRVNGVAMNG
AEFVEKIIREGYTQLDARKRGAVAQSILRNPQTSSFYKLKRKDGTLDYAEVLLEKETAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60720; Mature: 60720

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENIRPMPDARANSGYELTLPNGATESFNTLGDVLYRMNQKPAAGAESLYGKADRMEVCS
CCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHCC
PAGKIYFVEQRYSELGIRMPPGQGHVQDIMNRMLVEVMPYAQGDLGTIKAPWQMTASQWG
CCCCEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
AINAIGKVAYGVYPCLSDEHRKQSCVTRDGNQHDVVDYVNSEFIVRLGYGHNGPLYDGQQ
HHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCC
TNSRHEIHVAYALARGDTVPEHVLAEYQDEEKVNAFSGLHWFSTLLKKPYLRGRISADRL
CCCCCEEEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHH
SQLVTLLNSDRPHVHEITVENAPFFIGLMNSLPAEATSVDFDNLLYEKGVLHVRPMPVPA
HHHHHHHCCCCCCEEEEEECCCCEEEEEHHCCCCCCCCCCHHHHHHHCCCEEECCCCCCC
QEPNIGVPVNAFATELRKMQVEKRKRTQSKHIEEQMAKRNMTLREMHYQLKLVEGIDTWE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHH
THNWANRVAQAVESKNLVVLLDVLDGPSNDTTKRAIEKFYPVKLLNVSAAKRRRAIFALA
CCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCEEEEECHHHHHHHHHHHHC
GHVTDEHYAVAEAAYKAERKATAEAQEAEKERKRNETRLEDTRAVATGTNYRVNGVAMNG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEECH
AEFVEKIIREGYTQLDARKRGAVAQSILRNPQTSSFYKLKRKDGTLDYAEVLLEKETAAA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MENIRPMPDARANSGYELTLPNGATESFNTLGDVLYRMNQKPAAGAESLYGKADRMEVCS
CCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHCC
PAGKIYFVEQRYSELGIRMPPGQGHVQDIMNRMLVEVMPYAQGDLGTIKAPWQMTASQWG
CCCCEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
AINAIGKVAYGVYPCLSDEHRKQSCVTRDGNQHDVVDYVNSEFIVRLGYGHNGPLYDGQQ
HHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCCC
TNSRHEIHVAYALARGDTVPEHVLAEYQDEEKVNAFSGLHWFSTLLKKPYLRGRISADRL
CCCCCEEEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHH
SQLVTLLNSDRPHVHEITVENAPFFIGLMNSLPAEATSVDFDNLLYEKGVLHVRPMPVPA
HHHHHHHCCCCCCEEEEEECCCCEEEEEHHCCCCCCCCCCHHHHHHHCCCEEECCCCCCC
QEPNIGVPVNAFATELRKMQVEKRKRTQSKHIEEQMAKRNMTLREMHYQLKLVEGIDTWE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHH
THNWANRVAQAVESKNLVVLLDVLDGPSNDTTKRAIEKFYPVKLLNVSAAKRRRAIFALA
CCHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCEEEEECHHHHHHHHHHHHC
GHVTDEHYAVAEAAYKAERKATAEAQEAEKERKRNETRLEDTRAVATGTNYRVNGVAMNG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEECH
AEFVEKIIREGYTQLDARKRGAVAQSILRNPQTSSFYKLKRKDGTLDYAEVLLEKETAAA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHEEECCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA