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The map label for this gene is 89885842

Identifier: 89885842

GI number: 89885842

Start: 119343

End: 120860

Strand: Reverse

Name: 89885842

Synonym: Rfer_4356

Alternate gene names: NA

Gene position: 120860-119343 (Counterclockwise)

Preceding gene: 89885844

Following gene: 89885837

Centisome position: 46.95

GC content: 52.24

Gene sequence:

>1518_bases
GTGAAGAAACAAGACAAGCCTGCCATCGATCGACCAGATCCAGATTTTGAGACCCGTAGTCGCGCCCAGGACCAGCCGTC
CCTTTTTGCGACGGAAGATCTGATCATTCCCGATGGGATCAGGAGCTACCGGAAAGCGGTCAGTGCCATTCATGTTGTGC
CCGTCAACTCGTCGCACACACTTCATACATCCAAGTTGTTTGATGCGTGCATCCTGATCGCTCAACTAGACTTCAAACTG
AGGCCTCGCGATCAGGTAGCCCGCATCAAGACCGAGCGAATTTCCATAACATTTGAAACCAGAATCACAGACTTGGTTCG
GCTGGCCGGCATCCCCGGCAAGAACTACAAGCGAATCTACGAGGACCTTGATTTTCTGTTTGAAATGATTCTGAAGTGGA
ACGTACTGGACGAGGACGCGGCCGTGGCGTTCGAAATGAAGTCTCATTTTTTTACTATGCTTGGCATAGGCGTTGGACAC
AAACGGGGCGCTATTCGGTTTTCATTTCACCCGGATGTTATGGACATCGTGCTGGAGCCAAGTAACTGGGCCACGCTGTC
CTTAAAAGCCATGGATGGGCTGGGCACGCTACCAAGTTATGCCCTGTACCAACAGACATTTCGCTACCTCGGGACAACCG
CGAAATGCACAGCCAGCTTGCCGACCGAAACCTGGATAGACCTTCTGCTGGGGCCATCGCGGTACGTCAAGACAGATCCC
GCGACTGGTAAAAAAACTGTCACTTCCTACGGCGACTTCAAAAGGCGTGTTTTAAACGATGCGATCACGCGCGTCAATGA
AGCCAAAGCCCTCAACTACACATTGCGTCTAGACGAAAAAAGGGCTGGGAACAGAGTATCCAAACTTCAATTCTTTTTCA
TCCCAAAAAAGCAGGCGTCGCTTGGCTTGCCATTAACATGGCCCGAGGATGGATTGAAACTTCTGACAAATATGGGTTTC
AGTGAGGCTGAAATAAACGACATGAGCCAGTCGGATTCATACGAGGTCATTGCTGAGTCGTTGACCAGGTTGAAGGCCGC
GGAGGTCCGGGCGCGTGAGCGGGGCAAGCCGATAACTTCAAGGAAGGCGTACTTCAGTGGCATCTTGTCGCGCGTCTCGC
AGGGCGCAACAGGCGCCGATCTGGAAATTGATCGAGTGGAGGAAGAGGTACGAATCCAAGCGGAGGCCAAAGCTGATAAG
GAGCGACAGGAAAGGCAGAGGGAGGCCTTTGAAAAACATCAGTCGGATGTTTCGACGCAGCGGTTGTTTGCCATGGACGC
GAATCTCCGAGATGCCTTGTTTGCAAGATTTGAAGGCACTCCTGAGGGGAAAAAAGCAAGGGTGTTCATTGACAAAGGCT
GGACCCCGCGAAACACGCCGGCGGTCGCAAGTTTTAAGAATTGGCTGAAAGAGAGCAACAACGAGGTCTATCTGAGCTTG
CTTCAGGAACCCGAAGACAGGTCATTCGACTCCTGGGTGGCTTGGCGCCTTGAGGCCTTGGCGAACCAAAGTCCTTAG

Upstream 100 bases:

>100_bases
GTCGGTGGCAGTTTTGCATACTTATGGAGCACTTGAGAGGTCTATTGAAATGTCTATGGCAAGAAAATGTCACATCGTGC
CATAGAGTAAACTTATCTGT

Downstream 100 bases:

>100_bases
CTGGCGAGAAACAGTGAGGCCCGCAAGGACGCAGGGACGTCCTTTTATCAATGCGGGCGCATTTAGTCAGCCCTCAAAAG
GCAGGATCGGCGCATTTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MKKQDKPAIDRPDPDFETRSRAQDQPSLFATEDLIIPDGIRSYRKAVSAIHVVPVNSSHTLHTSKLFDACILIAQLDFKL
RPRDQVARIKTERISITFETRITDLVRLAGIPGKNYKRIYEDLDFLFEMILKWNVLDEDAAVAFEMKSHFFTMLGIGVGH
KRGAIRFSFHPDVMDIVLEPSNWATLSLKAMDGLGTLPSYALYQQTFRYLGTTAKCTASLPTETWIDLLLGPSRYVKTDP
ATGKKTVTSYGDFKRRVLNDAITRVNEAKALNYTLRLDEKRAGNRVSKLQFFFIPKKQASLGLPLTWPEDGLKLLTNMGF
SEAEINDMSQSDSYEVIAESLTRLKAAEVRARERGKPITSRKAYFSGILSRVSQGATGADLEIDRVEEEVRIQAEAKADK
ERQERQREAFEKHQSDVSTQRLFAMDANLRDALFARFEGTPEGKKARVFIDKGWTPRNTPAVASFKNWLKESNNEVYLSL
LQEPEDRSFDSWVAWRLEALANQSP

Sequences:

>Translated_505_residues
MKKQDKPAIDRPDPDFETRSRAQDQPSLFATEDLIIPDGIRSYRKAVSAIHVVPVNSSHTLHTSKLFDACILIAQLDFKL
RPRDQVARIKTERISITFETRITDLVRLAGIPGKNYKRIYEDLDFLFEMILKWNVLDEDAAVAFEMKSHFFTMLGIGVGH
KRGAIRFSFHPDVMDIVLEPSNWATLSLKAMDGLGTLPSYALYQQTFRYLGTTAKCTASLPTETWIDLLLGPSRYVKTDP
ATGKKTVTSYGDFKRRVLNDAITRVNEAKALNYTLRLDEKRAGNRVSKLQFFFIPKKQASLGLPLTWPEDGLKLLTNMGF
SEAEINDMSQSDSYEVIAESLTRLKAAEVRARERGKPITSRKAYFSGILSRVSQGATGADLEIDRVEEEVRIQAEAKADK
ERQERQREAFEKHQSDVSTQRLFAMDANLRDALFARFEGTPEGKKARVFIDKGWTPRNTPAVASFKNWLKESNNEVYLSL
LQEPEDRSFDSWVAWRLEALANQSP
>Mature_505_residues
MKKQDKPAIDRPDPDFETRSRAQDQPSLFATEDLIIPDGIRSYRKAVSAIHVVPVNSSHTLHTSKLFDACILIAQLDFKL
RPRDQVARIKTERISITFETRITDLVRLAGIPGKNYKRIYEDLDFLFEMILKWNVLDEDAAVAFEMKSHFFTMLGIGVGH
KRGAIRFSFHPDVMDIVLEPSNWATLSLKAMDGLGTLPSYALYQQTFRYLGTTAKCTASLPTETWIDLLLGPSRYVKTDP
ATGKKTVTSYGDFKRRVLNDAITRVNEAKALNYTLRLDEKRAGNRVSKLQFFFIPKKQASLGLPLTWPEDGLKLLTNMGF
SEAEINDMSQSDSYEVIAESLTRLKAAEVRARERGKPITSRKAYFSGILSRVSQGATGADLEIDRVEEEVRIQAEAKADK
ERQERQREAFEKHQSDVSTQRLFAMDANLRDALFARFEGTPEGKKARVFIDKGWTPRNTPAVASFKNWLKESNNEVYLSL
LQEPEDRSFDSWVAWRLEALANQSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57386; Mature: 57386

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQDKPAIDRPDPDFETRSRAQDQPSLFATEDLIIPDGIRSYRKAVSAIHVVPVNSSHT
CCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCEECCCHHHHHHHHHHEEEEEECCCCCC
LHTSKLFDACILIAQLDFKLRPRDQVARIKTERISITFETRITDLVRLAGIPGKNYKRIY
CHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEEEEEEHHHHHHHHHHCCCCCCHHHHHH
EDLDFLFEMILKWNVLDEDAAVAFEMKSHFFTMLGIGVGHKRGAIRFSFHPDVMDIVLEP
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECC
SNWATLSLKAMDGLGTLPSYALYQQTFRYLGTTAKCTASLPTETWIDLLLGPSRYVKTDP
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCEECCC
ATGKKTVTSYGDFKRRVLNDAITRVNEAKALNYTLRLDEKRAGNRVSKLQFFFIPKKQAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHCCCCHHEEEEEEEECCCCC
LGLPLTWPEDGLKLLTNMGFSEAEINDMSQSDSYEVIAESLTRLKAAEVRARERGKPITS
CCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
RKAYFSGILSRVSQGATGADLEIDRVEEEVRIQAEAKADKERQERQREAFEKHQSDVSTQ
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
RLFAMDANLRDALFARFEGTPEGKKARVFIDKGWTPRNTPAVASFKNWLKESNNEVYLSL
HEEEECCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEE
LQEPEDRSFDSWVAWRLEALANQSP
ECCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKQDKPAIDRPDPDFETRSRAQDQPSLFATEDLIIPDGIRSYRKAVSAIHVVPVNSSHT
CCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCEECCCHHHHHHHHHHEEEEEECCCCCC
LHTSKLFDACILIAQLDFKLRPRDQVARIKTERISITFETRITDLVRLAGIPGKNYKRIY
CHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEEEEEEHHHHHHHHHHCCCCCCHHHHHH
EDLDFLFEMILKWNVLDEDAAVAFEMKSHFFTMLGIGVGHKRGAIRFSFHPDVMDIVLEP
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECC
SNWATLSLKAMDGLGTLPSYALYQQTFRYLGTTAKCTASLPTETWIDLLLGPSRYVKTDP
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCCCEECCC
ATGKKTVTSYGDFKRRVLNDAITRVNEAKALNYTLRLDEKRAGNRVSKLQFFFIPKKQAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHCCCCHHEEEEEEEECCCCC
LGLPLTWPEDGLKLLTNMGFSEAEINDMSQSDSYEVIAESLTRLKAAEVRARERGKPITS
CCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCH
RKAYFSGILSRVSQGATGADLEIDRVEEEVRIQAEAKADKERQERQREAFEKHQSDVSTQ
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
RLFAMDANLRDALFARFEGTPEGKKARVFIDKGWTPRNTPAVASFKNWLKESNNEVYLSL
HEEEECCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEE
LQEPEDRSFDSWVAWRLEALANQSP
ECCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA