Click here to switch to the map view.

The map label for this gene is 89885751

Identifier: 89885751

GI number: 89885751

Start: 19935

End: 20564

Strand: Reverse

Name: 89885751

Synonym: Rfer_4264

Alternate gene names: NA

Gene position: 20564-19935 (Counterclockwise)

Preceding gene: 89885752

Following gene: 89885750

Centisome position: 7.99

GC content: 49.68

Gene sequence:

>630_bases
ATGGTCAAGACACATGTAAAACTGTGGATCATTTTGCTGTTTCTGGCAATATTTATAGTTCCTGCCATCCTGTCGCCTGA
AATGGCTGAAGCCAGGCTGCGCTCCGAGTATGAATCGTCCGCTGCAATCTTTGGTGTTGCCAGAGTCGACACCATCACTG
CGCGCGCTAATGCTGTGTATGACGTCACCGTTGGCGCGTCGGGTATCGACAAGCTGATTCAAACCGGCTATGTGAAGAAG
AGCGACACCAGAAACATGATGATTGCGAAAAATGCGAACGAGACCGCATCGTCATTTACAAACAACTACCTCAAGTCGAT
GCTGCTGCAGATTTACGGCGTATTTTTCCGCGGCAGTCTCATGTTGCAGTGGTTGGTATATGTGGGCTTCTTTTTGTTTG
CAGCCATTGTGGATGGAGTCATGCAAAGAAGAATCAAGAAAGACCTCATTCAGATGAATGCGCCGATCCAGTTCGCGGTG
TCCTTCCACATCGTGATTGCGATTATTTTCACGCCGCTGGCCTATCTACTTCTGCCTGGGGCCGTTACGCCATGGTTTAT
GCCGATCTGGACTTTGGTCATTGCGTTGCCCCTATCAAAGGCCATAGCGAACGCTGCAAAGACGGGCTGA

Upstream 100 bases:

>100_bases
GAAACATGCTGCTGCAGCGATTGTTGCGATTCAAGGACACCATGTCCATTGGGCGTGCCGGCATCGATATGCATTCTTAC
GATATGTTTTGAGGTGAGCC

Downstream 100 bases:

>100_bases
TTTGGGAAAACCGAGCGTAAAACAGTAGTTTGTTCTTATATTTTCAGCACAGATTGGGTCAAAATCAGCTTATGGCAACT
GTTCAGATAGATGCAACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MVKTHVKLWIILLFLAIFIVPAILSPEMAEARLRSEYESSAAIFGVARVDTITARANAVYDVTVGASGIDKLIQTGYVKK
SDTRNMMIAKNANETASSFTNNYLKSMLLQIYGVFFRGSLMLQWLVYVGFFLFAAIVDGVMQRRIKKDLIQMNAPIQFAV
SFHIVIAIIFTPLAYLLLPGAVTPWFMPIWTLVIALPLSKAIANAAKTG

Sequences:

>Translated_209_residues
MVKTHVKLWIILLFLAIFIVPAILSPEMAEARLRSEYESSAAIFGVARVDTITARANAVYDVTVGASGIDKLIQTGYVKK
SDTRNMMIAKNANETASSFTNNYLKSMLLQIYGVFFRGSLMLQWLVYVGFFLFAAIVDGVMQRRIKKDLIQMNAPIQFAV
SFHIVIAIIFTPLAYLLLPGAVTPWFMPIWTLVIALPLSKAIANAAKTG
>Mature_209_residues
MVKTHVKLWIILLFLAIFIVPAILSPEMAEARLRSEYESSAAIFGVARVDTITARANAVYDVTVGASGIDKLIQTGYVKK
SDTRNMMIAKNANETASSFTNNYLKSMLLQIYGVFFRGSLMLQWLVYVGFFLFAAIVDGVMQRRIKKDLIQMNAPIQFAV
SFHIVIAIIFTPLAYLLLPGAVTPWFMPIWTLVIALPLSKAIANAAKTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23168; Mature: 23168

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKTHVKLWIILLFLAIFIVPAILSPEMAEARLRSEYESSAAIFGVARVDTITARANAVY
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
DVTVGASGIDKLIQTGYVKKSDTRNMMIAKNANETASSFTNNYLKSMLLQIYGVFFRGSL
EEECCHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLQWLVYVGFFLFAAIVDGVMQRRIKKDLIQMNAPIQFAVSFHIVIAIIFTPLAYLLLPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
AVTPWFMPIWTLVIALPLSKAIANAAKTG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKTHVKLWIILLFLAIFIVPAILSPEMAEARLRSEYESSAAIFGVARVDTITARANAVY
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
DVTVGASGIDKLIQTGYVKKSDTRNMMIAKNANETASSFTNNYLKSMLLQIYGVFFRGSL
EEECCHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLQWLVYVGFFLFAAIVDGVMQRRIKKDLIQMNAPIQFAVSFHIVIAIIFTPLAYLLLPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
AVTPWFMPIWTLVIALPLSKAIANAAKTG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA