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The map label for this gene is 89885743

Identifier: 89885743

GI number: 89885743

Start: 11943

End: 12350

Strand: Reverse

Name: 89885743

Synonym: Rfer_4256

Alternate gene names: NA

Gene position: 12350-11943 (Counterclockwise)

Preceding gene: 89885744

Following gene: 89885742

Centisome position: 4.8

GC content: 46.81

Gene sequence:

>408_bases
ATGACTTCAACCACTCAAAAGACCAATTTTTCCAGTCGCATCGTGAATGCGACTGGCCTGATATACACGATTGTTTACCT
GATTGCCGCCGCGTGGGTCGGCACCCAAATATGGGTCTACAACGCTGGTTGGTATCTGACCGCGACTAACCAGTTGGGTC
CCCAATGGCAGCAGTCTGTAACCTCTTACTGTTTGAGACAGATCAAGGGTTGCCGGTCAGTCACCTTTGACATGGATTAT
CTGTCATCACTAGGTTGGTCATCAGGCGGCTTTGTTGCAGTCAAAAGGCGTGTAAATGTGACTATGGACGCTGGAATGGA
AGCGTATGACGCAATCAATACGTTTATCGAACCAACATACAGAGATCACGTATCAATTATTGTCCACAAAAGCAAGGGAG
CAAAATAA

Upstream 100 bases:

>100_bases
AAGCGGACCGGGCGGCGCCAAAAAGGCTCTGCTGTCCGAGCAGAAATAAAAGTTGCCAAATTGTGTTGTGTCCGTATCAT
GAATTCAAAGGACACAAGAA

Downstream 100 bases:

>100_bases
TGGACGCCGAAACAAAGAGGTCGATCACATTGGTTCCAGACAACAGTTTAGGTTTGACCGTAATCGCCACGGTACTCGCC
TTCTGTCTGTATGTGTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MTSTTQKTNFSSRIVNATGLIYTIVYLIAAAWVGTQIWVYNAGWYLTATNQLGPQWQQSVTSYCLRQIKGCRSVTFDMDY
LSSLGWSSGGFVAVKRRVNVTMDAGMEAYDAINTFIEPTYRDHVSIIVHKSKGAK

Sequences:

>Translated_135_residues
MTSTTQKTNFSSRIVNATGLIYTIVYLIAAAWVGTQIWVYNAGWYLTATNQLGPQWQQSVTSYCLRQIKGCRSVTFDMDY
LSSLGWSSGGFVAVKRRVNVTMDAGMEAYDAINTFIEPTYRDHVSIIVHKSKGAK
>Mature_134_residues
TSTTQKTNFSSRIVNATGLIYTIVYLIAAAWVGTQIWVYNAGWYLTATNQLGPQWQQSVTSYCLRQIKGCRSVTFDMDYL
SSLGWSSGGFVAVKRRVNVTMDAGMEAYDAINTFIEPTYRDHVSIIVHKSKGAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15090; Mature: 14959

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTTQKTNFSSRIVNATGLIYTIVYLIAAAWVGTQIWVYNAGWYLTATNQLGPQWQQSV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEECCCCCHHHHHHH
TSYCLRQIKGCRSVTFDMDYLSSLGWSSGGFVAVKRRVNVTMDAGMEAYDAINTFIEPTY
HHHHHHHHCCCCCEEECHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCC
RDHVSIIVHKSKGAK
CCCEEEEEECCCCCC
>Mature Secondary Structure 
TSTTQKTNFSSRIVNATGLIYTIVYLIAAAWVGTQIWVYNAGWYLTATNQLGPQWQQSV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEEECCCCCHHHHHHH
TSYCLRQIKGCRSVTFDMDYLSSLGWSSGGFVAVKRRVNVTMDAGMEAYDAINTFIEPTY
HHHHHHHHCCCCCEEECHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCC
RDHVSIIVHKSKGAK
CCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA