BacMap

Definition	Rhodoferax ferrireducens T118 plasmid1, complete sequence.
Accession	NC_007901
Length	257,447

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The map label for this gene is cdcH [H]

Identifier: 89885742

GI number: 89885742

Start: 9877

End: 11943

Strand: Reverse

Name: cdcH [H]

Synonym: Rfer_4255

Alternate gene names: 89885742

Gene position: 11943-9877 (Counterclockwise)

Preceding gene: 89885743

Following gene: 89885741

Centisome position: 4.64

GC content: 54.57

Gene sequence:

>2067_bases
ATGGACGCCGAAACAAAGAGGTCGATCACATTGGTTCCAGACAACAGTTTAGGTTTGACCGTAATCGCCACGGTACTCGC
CTTCTGTCTGTATGTGTGGCTCGTCAACTCAGCGATGGCGCGGGCTCCGTTCGTTTCATGGGCGTCGAGCAGCAGTGCCG
TCACCGCTGTCCAGTGGGGGGGGATGATTTACTTTCTATGTATCTTTGCGGCGCAGATTCCAGAGGCCACTATTCGTGCC
GCCACATACCTGTATGTATTCTTTTTTCCGTTTCTCATGGCGGTGGTCGCCGCTGTAACGGCGCAAGGCATTGGCGAATT
TGGTCCAGTAATGCTACCCCTTGCGTTTTTGACGGTGGGAATTATCTTCCCGGTCCTGATCGGTTGGTTAATGGCGGTTA
CAACAAGAACAGTCATCAGGTTTTTCATCATCAGTCCTGTAGCATGGTCTGCAGGCATCAAGTCGCCTCAAGCAGATCTT
CCCAAGGGACAGAACACAACGGAAGTACAGCGTCCTCAACCTGCAGAAAACAGCACTGCAAACACAGAGACTCAGAGCCA
TAGTTTTGCGTGGAAGAACCCGACGGTGGGTTTAGACAGCATGGTGGGGATGGCTGACTTCAAAGCCGAGTTGCTAAAAA
ACATCCAACCTTTCCGCGATTACGCTGCCCGTAAAGGGACGGTTGCTGACACAAATGGCATTCTGCTTTCTGGCCCATCG
GGAAACGGAAAGACGACTATCGCTGAATTAATTGCGGGGGAGCTCGGTCTACCCTTTGTGAAACTTGGCTGCCAAGATCT
CACAAGCAAATGGGTCAATGAGTCTCCAGCAGTTTTGAAAGAGCTTTTCCGCCAAGCTGCCTTAGAGCCCTGCGTTGTTT
TCTTTGACGAATTTGATGGTGTCGCCATGAGCCGGGGCAATGGAAACATGCACGACGAAGACCGCAAGCTGGTCACAGCA
TTGCTCTCCGAAATCGACAACGCACGAAAATCGCGGATTGTCCTGATTGCCGCAACAAACTTTGCGGAGAAAATTGACTC
CGCCATAGCTCGCGACGGGCGTTTTGACTTCCGCATTGAAGTTCCCTACCCGGACCAGGAAGCCCGGGAGGCAATTTTGC
GCGGGATGCTCAAGAAATTCAATGTCACCGCCGAAGAGTCCACCGTGCATCACGTAGCCGAACTCTGGGTGCGCCGCTCA
ATCGCCTTTATCGAATCCACCGTCAAACGCCTGCGTGACAATGGCAAAGGGATCAAGAGCACTATCGCCACGGTCGAGGA
CTTCAAACAGGCTTCGCGCGAGGCCTCGCGCCGCGCCAGCGCAATCCCCAATTTTGGTGCTAAGTTGTCGGAAATTGCAT
TGACCTCTGAGGTGCGCCGCGAAACCGACAGTCTGGTCTACCGGTTGCGCCACTGGGAAGAAATCACAGAACGCGGTGGG
GAGCCACCGAGCGGGGTCTTGCTGTATGGCCCACCGGGCACCGGCAAGACCAACCTCGTGCGCGCGCTGGCCCGTGAACT
CGAATACTGGCACGTGTTCGAGGTCAATGCCTCCGATGTTTTACAAGACCCGCGCAAGTTCCGCGACACCATGGACCTTG
CCTCCAATCATCGCCCGGCCATCATCTTCATTGACGAGGCCGATGAATTGCTGCGCGATCGCACACATTCAAACGCCGCA
GGCGCGACCAATGAAATCCTCAAAGCCATGGACGGCATGATGGGCAAAATTCCAGAAATCGTGTTTATGGCGGCGACCAA
CAATGCCGAGATCATTGACGGAGCCGCGCTGCGCGGCGGCCGCTTTGCAGAGAAGATTTTCATGGGCAAACTCACGGGTG
AGGATCTGGTGACCTTTCTGGAGAAAGACTTCGTCTCCAAGACAAAGGTAACGTTTGCGCCGGACCTGACTCCCAGAGCC
CTTGCTGCAAAACTTCGCGAGGCTGCACCATCGGACGCCCTGGGTCTGTTGCGCAAGGCCATCAATTACACATTCGGTCA
AGGATGTGATGCCCGGCCGGTTTGCATGGCTGACATCGACAAGGCGATCATTTCGACGCAGCTGTAG

Upstream 100 bases:

>100_bases
ACGCTGGAATGGAAGCGTATGACGCAATCAATACGTTTATCGAACCAACATACAGAGATCACGTATCAATTATTGTCCAC
AAAAGCAAGGGAGCAAAATA

Downstream 100 bases:

>100_bases
TTGGCCAAATTGCCGGGCCATCCGGCAACGCTGGACTGGCGATTCACACCATACCCCCTTGCCACAGCACGACGGCATGG
GGGTAATGCGTCAAAACTGC

Product: AAA ATPase, central region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 688; Mature: 688

Protein sequence:

>688_residues
MDAETKRSITLVPDNSLGLTVIATVLAFCLYVWLVNSAMARAPFVSWASSSSAVTAVQWGGMIYFLCIFAAQIPEATIRA
ATYLYVFFFPFLMAVVAAVTAQGIGEFGPVMLPLAFLTVGIIFPVLIGWLMAVTTRTVIRFFIISPVAWSAGIKSPQADL
PKGQNTTEVQRPQPAENSTANTETQSHSFAWKNPTVGLDSMVGMADFKAELLKNIQPFRDYAARKGTVADTNGILLSGPS
GNGKTTIAELIAGELGLPFVKLGCQDLTSKWVNESPAVLKELFRQAALEPCVVFFDEFDGVAMSRGNGNMHDEDRKLVTA
LLSEIDNARKSRIVLIAATNFAEKIDSAIARDGRFDFRIEVPYPDQEAREAILRGMLKKFNVTAEESTVHHVAELWVRRS
IAFIESTVKRLRDNGKGIKSTIATVEDFKQASREASRRASAIPNFGAKLSEIALTSEVRRETDSLVYRLRHWEEITERGG
EPPSGVLLYGPPGTGKTNLVRALARELEYWHVFEVNASDVLQDPRKFRDTMDLASNHRPAIIFIDEADELLRDRTHSNAA
GATNEILKAMDGMMGKIPEIVFMAATNNAEIIDGAALRGGRFAEKIFMGKLTGEDLVTFLEKDFVSKTKVTFAPDLTPRA
LAAKLREAAPSDALGLLRKAINYTFGQGCDARPVCMADIDKAIISTQL

Sequences:

>Translated_688_residues
MDAETKRSITLVPDNSLGLTVIATVLAFCLYVWLVNSAMARAPFVSWASSSSAVTAVQWGGMIYFLCIFAAQIPEATIRA
ATYLYVFFFPFLMAVVAAVTAQGIGEFGPVMLPLAFLTVGIIFPVLIGWLMAVTTRTVIRFFIISPVAWSAGIKSPQADL
PKGQNTTEVQRPQPAENSTANTETQSHSFAWKNPTVGLDSMVGMADFKAELLKNIQPFRDYAARKGTVADTNGILLSGPS
GNGKTTIAELIAGELGLPFVKLGCQDLTSKWVNESPAVLKELFRQAALEPCVVFFDEFDGVAMSRGNGNMHDEDRKLVTA
LLSEIDNARKSRIVLIAATNFAEKIDSAIARDGRFDFRIEVPYPDQEAREAILRGMLKKFNVTAEESTVHHVAELWVRRS
IAFIESTVKRLRDNGKGIKSTIATVEDFKQASREASRRASAIPNFGAKLSEIALTSEVRRETDSLVYRLRHWEEITERGG
EPPSGVLLYGPPGTGKTNLVRALARELEYWHVFEVNASDVLQDPRKFRDTMDLASNHRPAIIFIDEADELLRDRTHSNAA
GATNEILKAMDGMMGKIPEIVFMAATNNAEIIDGAALRGGRFAEKIFMGKLTGEDLVTFLEKDFVSKTKVTFAPDLTPRA
LAAKLREAAPSDALGLLRKAINYTFGQGCDARPVCMADIDKAIISTQL
>Mature_688_residues
MDAETKRSITLVPDNSLGLTVIATVLAFCLYVWLVNSAMARAPFVSWASSSSAVTAVQWGGMIYFLCIFAAQIPEATIRA
ATYLYVFFFPFLMAVVAAVTAQGIGEFGPVMLPLAFLTVGIIFPVLIGWLMAVTTRTVIRFFIISPVAWSAGIKSPQADL
PKGQNTTEVQRPQPAENSTANTETQSHSFAWKNPTVGLDSMVGMADFKAELLKNIQPFRDYAARKGTVADTNGILLSGPS
GNGKTTIAELIAGELGLPFVKLGCQDLTSKWVNESPAVLKELFRQAALEPCVVFFDEFDGVAMSRGNGNMHDEDRKLVTA
LLSEIDNARKSRIVLIAATNFAEKIDSAIARDGRFDFRIEVPYPDQEAREAILRGMLKKFNVTAEESTVHHVAELWVRRS
IAFIESTVKRLRDNGKGIKSTIATVEDFKQASREASRRASAIPNFGAKLSEIALTSEVRRETDSLVYRLRHWEEITERGG
EPPSGVLLYGPPGTGKTNLVRALARELEYWHVFEVNASDVLQDPRKFRDTMDLASNHRPAIIFIDEADELLRDRTHSNAA
GATNEILKAMDGMMGKIPEIVFMAATNNAEIIDGAALRGGRFAEKIFMGKLTGEDLVTFLEKDFVSKTKVTFAPDLTPRA
LAAKLREAAPSDALGLLRKAINYTFGQGCDARPVCMADIDKAIISTQL

Specific function: May be part of a transduction pathway connecting light to cell division [H]

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI6005942, Length=449, Percent_Identity=30.7349665924276, Blast_Score=162, Evalue=1e-39,
Organism=Homo sapiens, GI157671927, Length=462, Percent_Identity=29.4372294372294, Blast_Score=157, Evalue=4e-38,
Organism=Homo sapiens, GI229577436, Length=460, Percent_Identity=26.304347826087, Blast_Score=126, Evalue=9e-29,
Organism=Homo sapiens, GI21327685, Length=172, Percent_Identity=38.3720930232558, Blast_Score=116, Evalue=7e-26,
Organism=Homo sapiens, GI7657689, Length=172, Percent_Identity=38.3720930232558, Blast_Score=116, Evalue=8e-26,
Organism=Homo sapiens, GI45643125, Length=160, Percent_Identity=38.75, Blast_Score=109, Evalue=8e-24,
Organism=Homo sapiens, GI45643123, Length=160, Percent_Identity=38.75, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI31742536, Length=183, Percent_Identity=34.9726775956284, Blast_Score=103, Evalue=6e-22,
Organism=Homo sapiens, GI112789543, Length=183, Percent_Identity=34.9726775956284, Blast_Score=103, Evalue=6e-22,
Organism=Homo sapiens, GI4505725, Length=202, Percent_Identity=33.1683168316832, Blast_Score=102, Evalue=2e-21,
Organism=Homo sapiens, GI194018488, Length=260, Percent_Identity=30, Blast_Score=100, Evalue=6e-21,
Organism=Homo sapiens, GI5901990, Length=280, Percent_Identity=29.6428571428571, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI300192933, Length=185, Percent_Identity=32.972972972973, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI24497435, Length=162, Percent_Identity=35.1851851851852, Blast_Score=96, Evalue=1e-19,
Organism=Homo sapiens, GI153792536, Length=174, Percent_Identity=37.3563218390805, Blast_Score=94, Evalue=6e-19,
Organism=Homo sapiens, GI11875211, Length=148, Percent_Identity=37.8378378378378, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI40806170, Length=148, Percent_Identity=37.8378378378378, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI24497618, Length=174, Percent_Identity=36.2068965517241, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI89064750, Length=208, Percent_Identity=28.3653846153846, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI24430155, Length=208, Percent_Identity=28.3653846153846, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI14149767, Length=202, Percent_Identity=31.1881188118812, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI62177112, Length=202, Percent_Identity=31.1881188118812, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI5729991, Length=208, Percent_Identity=28.3653846153846, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI24430151, Length=147, Percent_Identity=32.6530612244898, Blast_Score=90, Evalue=7e-18,
Organism=Homo sapiens, GI226371754, Length=188, Percent_Identity=30.8510638297872, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI195539395, Length=147, Percent_Identity=34.0136054421769, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI21361144, Length=201, Percent_Identity=32.3383084577114, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI31377644, Length=154, Percent_Identity=35.0649350649351, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI7019569, Length=165, Percent_Identity=33.9393939393939, Blast_Score=84, Evalue=6e-16,
Organism=Homo sapiens, GI4507173, Length=213, Percent_Identity=29.5774647887324, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI156564401, Length=312, Percent_Identity=27.2435897435897, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI4506209, Length=148, Percent_Identity=33.1081081081081, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI64084766, Length=195, Percent_Identity=30.7692307692308, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI17865802, Length=149, Percent_Identity=36.9127516778523, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI310125282, Length=158, Percent_Identity=34.8101265822785, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI310125280, Length=158, Percent_Identity=34.8101265822785, Blast_Score=74, Evalue=6e-13,
Organism=Escherichia coli, GI1789568, Length=151, Percent_Identity=37.0860927152318, Blast_Score=103, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17532375, Length=507, Percent_Identity=30.7692307692308, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17531535, Length=507, Percent_Identity=29.585798816568, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17537217, Length=493, Percent_Identity=25.3549695740365, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17508053, Length=211, Percent_Identity=34.5971563981043, Blast_Score=108, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17554264, Length=150, Percent_Identity=38.6666666666667, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI25146157, Length=195, Percent_Identity=36.4102564102564, Blast_Score=103, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71994521, Length=173, Percent_Identity=36.4161849710983, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI25144278, Length=161, Percent_Identity=34.7826086956522, Blast_Score=97, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI25144281, Length=159, Percent_Identity=34.5911949685535, Blast_Score=97, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI32563584, Length=185, Percent_Identity=32.972972972973, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17508421, Length=185, Percent_Identity=32.972972972973, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17554786, Length=161, Percent_Identity=34.1614906832298, Blast_Score=94, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17562804, Length=196, Percent_Identity=32.6530612244898, Blast_Score=94, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI25153574, Length=156, Percent_Identity=32.6923076923077, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI193209502, Length=156, Percent_Identity=32.6923076923077, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71987364, Length=147, Percent_Identity=34.0136054421769, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71987372, Length=147, Percent_Identity=34.0136054421769, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI86561515, Length=160, Percent_Identity=35, Blast_Score=86, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI193206116, Length=149, Percent_Identity=36.9127516778523, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193206114, Length=149, Percent_Identity=36.9127516778523, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI133931034, Length=149, Percent_Identity=36.9127516778523, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17563250, Length=147, Percent_Identity=31.9727891156463, Blast_Score=85, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115534323, Length=218, Percent_Identity=33.0275229357798, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17508701, Length=157, Percent_Identity=30.5732484076433, Blast_Score=84, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17563248, Length=156, Percent_Identity=32.6923076923077, Blast_Score=83, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17505546, Length=189, Percent_Identity=29.1005291005291, Blast_Score=83, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17541224, Length=204, Percent_Identity=31.3725490196078, Blast_Score=82, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17541226, Length=204, Percent_Identity=31.3725490196078, Blast_Score=82, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17554784, Length=171, Percent_Identity=28.6549707602339, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17560432, Length=232, Percent_Identity=30.1724137931034, Blast_Score=79, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI133901662, Length=158, Percent_Identity=34.8101265822785, Blast_Score=75, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI133901658, Length=158, Percent_Identity=35.4430379746835, Blast_Score=75, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6320077, Length=512, Percent_Identity=28.125, Blast_Score=162, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6323429, Length=414, Percent_Identity=29.4685990338164, Blast_Score=149, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6322994, Length=229, Percent_Identity=33.1877729257642, Blast_Score=112, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6324000, Length=193, Percent_Identity=33.6787564766839, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6325281, Length=214, Percent_Identity=31.7757009345794, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6320854, Length=156, Percent_Identity=34.6153846153846, Blast_Score=98, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6325431, Length=229, Percent_Identity=31.4410480349345, Blast_Score=96, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6321390, Length=162, Percent_Identity=34.5679012345679, Blast_Score=95, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6322651, Length=147, Percent_Identity=36.0544217687075, Blast_Score=92, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6323736, Length=158, Percent_Identity=34.1772151898734, Blast_Score=91, Evalue=6e-19,
Organism=Saccharomyces cerevisiae, GI6319554, Length=314, Percent_Identity=27.7070063694268, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6324833, Length=159, Percent_Identity=32.7044025157233, Blast_Score=88, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6321709, Length=191, Percent_Identity=31.9371727748691, Blast_Score=87, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6320602, Length=146, Percent_Identity=40.4109589041096, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6322704, Length=156, Percent_Identity=33.974358974359, Blast_Score=84, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6320197, Length=166, Percent_Identity=33.7349397590361, Blast_Score=84, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6325183, Length=169, Percent_Identity=32.5443786982249, Blast_Score=83, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6320887, Length=215, Percent_Identity=29.3023255813954, Blast_Score=81, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6324691, Length=167, Percent_Identity=29.3413173652695, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6321465, Length=211, Percent_Identity=28.9099526066351, Blast_Score=79, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6320583, Length=243, Percent_Identity=28.3950617283951, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI161076488, Length=451, Percent_Identity=31.4855875831486, Blast_Score=168, Evalue=1e-41,
Organism=Drosophila melanogaster, GI17137560, Length=451, Percent_Identity=31.4855875831486, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI161076486, Length=451, Percent_Identity=31.4855875831486, Blast_Score=167, Evalue=3e-41,
Organism=Drosophila melanogaster, GI24652279, Length=170, Percent_Identity=37.6470588235294, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281363136, Length=497, Percent_Identity=26.1569416498994, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI78707192, Length=497, Percent_Identity=26.1569416498994, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28574878, Length=204, Percent_Identity=31.3725490196078, Blast_Score=103, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24665814, Length=210, Percent_Identity=31.4285714285714, Blast_Score=103, Evalue=5e-22,
Organism=Drosophila melanogaster, GI19921202, Length=411, Percent_Identity=23.3576642335766, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI45552965, Length=167, Percent_Identity=35.9281437125749, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI281365776, Length=167, Percent_Identity=35.9281437125749, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24660075, Length=167, Percent_Identity=35.9281437125749, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24581396, Length=263, Percent_Identity=30.7984790874525, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24658770, Length=173, Percent_Identity=33.5260115606936, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24644145, Length=202, Percent_Identity=33.6633663366337, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI21355121, Length=188, Percent_Identity=33.5106382978723, Blast_Score=96, Evalue=7e-20,
Organism=Drosophila melanogaster, GI281360144, Length=160, Percent_Identity=36.25, Blast_Score=96, Evalue=8e-20,
Organism=Drosophila melanogaster, GI281360140, Length=160, Percent_Identity=36.25, Blast_Score=96, Evalue=8e-20,
Organism=Drosophila melanogaster, GI281360136, Length=160, Percent_Identity=36.25, Blast_Score=96, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24644411, Length=160, Percent_Identity=36.25, Blast_Score=96, Evalue=9e-20,
Organism=Drosophila melanogaster, GI281360142, Length=160, Percent_Identity=36.25, Blast_Score=96, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21357333, Length=160, Percent_Identity=36.25, Blast_Score=96, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281360146, Length=160, Percent_Identity=36.25, Blast_Score=96, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281360138, Length=160, Percent_Identity=36.25, Blast_Score=96, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571849, Length=159, Percent_Identity=36.4779874213836, Blast_Score=94, Evalue=4e-19,
Organism=Drosophila melanogaster, GI28571847, Length=159, Percent_Identity=36.4779874213836, Blast_Score=94, Evalue=4e-19,
Organism=Drosophila melanogaster, GI19920408, Length=163, Percent_Identity=34.9693251533742, Blast_Score=94, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24651451, Length=161, Percent_Identity=33.5403726708075, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24640100, Length=147, Percent_Identity=34.6938775510204, Blast_Score=92, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281361487, Length=154, Percent_Identity=32.4675324675325, Blast_Score=91, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24649446, Length=145, Percent_Identity=33.7931034482759, Blast_Score=89, Evalue=8e-18,
Organism=Drosophila melanogaster, GI18860063, Length=200, Percent_Identity=27.5, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24663015, Length=162, Percent_Identity=32.0987654320988, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17738151, Length=165, Percent_Identity=37.5757575757576, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24639391, Length=191, Percent_Identity=32.4607329842932, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI20129423, Length=158, Percent_Identity=34.8101265822785, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI17137738, Length=148, Percent_Identity=32.4324324324324, Blast_Score=83, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24656825, Length=151, Percent_Identity=31.7880794701987, Blast_Score=83, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24656820, Length=151, Percent_Identity=31.7880794701987, Blast_Score=83, Evalue=8e-16,
Organism=Drosophila melanogaster, GI18859657, Length=142, Percent_Identity=36.6197183098592, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28573010, Length=287, Percent_Identity=28.2229965156794, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI17864540, Length=267, Percent_Identity=28.4644194756554, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI20129529, Length=184, Percent_Identity=33.1521739130435, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI45554047, Length=162, Percent_Identity=31.4814814814815, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24639486, Length=149, Percent_Identity=30.8724832214765, Blast_Score=72, Evalue=9e-13,
Organism=Drosophila melanogaster, GI28573181, Length=260, Percent_Identity=27.6923076923077, Blast_Score=72, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 75417; Mature: 75417

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00039 DEAD_ATP_HELICASE ; PS00674 AAA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAETKRSITLVPDNSLGLTVIATVLAFCLYVWLVNSAMARAPFVSWASSSSAVTAVQWG
CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEHHHC
GMIYFLCIFAAQIPEATIRAATYLYVFFFPFLMAVVAAVTAQGIGEFGPVMLPLAFLTVG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
IIFPVLIGWLMAVTTRTVIRFFIISPVAWSAGIKSPQADLPKGQNTTEVQRPQPAENSTA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NTETQSHSFAWKNPTVGLDSMVGMADFKAELLKNIQPFRDYAARKGTVADTNGILLSGPS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEECCC
GNGKTTIAELIAGELGLPFVKLGCQDLTSKWVNESPAVLKELFRQAALEPCVVFFDEFDG
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHEEHHHCCCC
VAMSRGNGNMHDEDRKLVTALLSEIDNARKSRIVLIAATNFAEKIDSAIARDGRFDFRIE
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCEEEEE
VPYPDQEAREAILRGMLKKFNVTAEESTVHHVAELWVRRSIAFIESTVKRLRDNGKGIKS
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TIATVEDFKQASREASRRASAIPNFGAKLSEIALTSEVRRETDSLVYRLRHWEEITERGG
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EPPSGVLLYGPPGTGKTNLVRALARELEYWHVFEVNASDVLQDPRKFRDTMDLASNHRPA
CCCCCEEEECCCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHCHHHHHHHHHHHCCCCCE
IIFIDEADELLRDRTHSNAAGATNEILKAMDGMMGKIPEIVFMAATNNAEIIDGAALRGG
EEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCCCC
RFAEKIFMGKLTGEDLVTFLEKDFVSKTKVTFAPDLTPRALAAKLREAAPSDALGLLRKA
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHH
INYTFGQGCDARPVCMADIDKAIISTQL
HHHHCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MDAETKRSITLVPDNSLGLTVIATVLAFCLYVWLVNSAMARAPFVSWASSSSAVTAVQWG
CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEHHHC
GMIYFLCIFAAQIPEATIRAATYLYVFFFPFLMAVVAAVTAQGIGEFGPVMLPLAFLTVG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
IIFPVLIGWLMAVTTRTVIRFFIISPVAWSAGIKSPQADLPKGQNTTEVQRPQPAENSTA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NTETQSHSFAWKNPTVGLDSMVGMADFKAELLKNIQPFRDYAARKGTVADTNGILLSGPS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEECCC
GNGKTTIAELIAGELGLPFVKLGCQDLTSKWVNESPAVLKELFRQAALEPCVVFFDEFDG
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHEEHHHCCCC
VAMSRGNGNMHDEDRKLVTALLSEIDNARKSRIVLIAATNFAEKIDSAIARDGRFDFRIE
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCEEEEE
VPYPDQEAREAILRGMLKKFNVTAEESTVHHVAELWVRRSIAFIESTVKRLRDNGKGIKS
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TIATVEDFKQASREASRRASAIPNFGAKLSEIALTSEVRRETDSLVYRLRHWEEITERGG
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EPPSGVLLYGPPGTGKTNLVRALARELEYWHVFEVNASDVLQDPRKFRDTMDLASNHRPA
CCCCCEEEECCCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHCHHHHHHHHHHHCCCCCE
IIFIDEADELLRDRTHSNAAGATNEILKAMDGMMGKIPEIVFMAATNNAEIIDGAALRGG
EEEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEECCCCCCCC
RFAEKIFMGKLTGEDLVTFLEKDFVSKTKVTFAPDLTPRALAAKLREAAPSDALGLLRKA
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCCHHHHHHHHHH
INYTFGQGCDARPVCMADIDKAIISTQL
HHHHCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11016950 [H]