Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256852
Identifier: 89256852
GI number: 89256852
Start: 1502373
End: 1503209
Strand: Reverse
Name: 89256852
Synonym: FTL_1575
Alternate gene names: NA
Gene position: 1503209-1502373 (Counterclockwise)
Preceding gene: 89256853
Following gene: 89256844
Centisome position: 79.28
GC content: 29.87
Gene sequence:
>837_bases ATGCTTAGTTATTTTAAAGCTAGAAGTAGACTATTTAGTAATAGTGCTTTTAGTTATGCTTGTATAATGACAATTTGTAA TGCTGTTGTTGTCGGTATTGCGTATATTTCTATAAGTTGGCATTTATTATCTCTACGAAATAGTATAGAAGTCATTATGC TATTTATGTTTACTTGGTATATTTGCGGTTTTATTATCACCACTTACAGATTGGTGATGTTGATAGGGAGTTTATTAGCG ACACTATGCAGCTTTAAGATTATTCCAAAAAGAAATGTCAAAAATACAAAGATAAGTTTTTTAAGAAACTGGCAAGAAGT AATTAGTTTTCTTAACCAAAATAAAACTCTATATTGGTGTTATTTAGCTCAAATTGGTATGACATGTTTGTATATGATTG CTCCAGTATTTATTTCTCCATATGCAAAGAATATTCTTAAAGCTTCTTCACTAGAGTTTGGCTTGATTGAGGTGACTTTT TCGGTAGGCTTTATAGTTGGAAATGTTTTATTACCATACATGATAGAGAAAATCTCACCAAAACAGACATTGGTTTTCTC GATGACTATATCAGCATTAATGTATTTATTATTAGGACTAAATGAGAGTATATTTTTTGCTAGCATATATTATTTAGTTG CGGGTATATTTATATCAGCATGGGTAATAATTGTTACCATAGCTCAGAAAAATACTCCGATCACCTTACAAGGTAAAATT CAAGGTATCTGTTATGGTTTTTCAGGCTTGGTAGTAATGTTTATCTATCTAATATTTTTTGCGATTAACTATATCCATTA CCTAGTAATAAATGGTTCTACATCTTGGCAATGTTAG
Upstream 100 bases:
>100_bases TTAGTGTAGAATCACCTTAAATATATCAACATCTCTATTTTCAATAATCAACATAGTCAACATCTGACATTAAATGGTTA AAATGAGATAGGTTTTAAAT
Downstream 100 bases:
>100_bases CTTTGAGTACCTTGTGGCCAATATCTAAAGGTTTAAAAATCTTAAACTTGAAAAATAAAGTGTAAGAAATATCAAGGATT ATTATATTCATTCTTTTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Transporter Facilitator Family; Facilitator Family Transporter
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MLSYFKARSRLFSNSAFSYACIMTICNAVVVGIAYISISWHLLSLRNSIEVIMLFMFTWYICGFIITTYRLVMLIGSLLA TLCSFKIIPKRNVKNTKISFLRNWQEVISFLNQNKTLYWCYLAQIGMTCLYMIAPVFISPYAKNILKASSLEFGLIEVTF SVGFIVGNVLLPYMIEKISPKQTLVFSMTISALMYLLLGLNESIFFASIYYLVAGIFISAWVIIVTIAQKNTPITLQGKI QGICYGFSGLVVMFIYLIFFAINYIHYLVINGSTSWQC
Sequences:
>Translated_278_residues MLSYFKARSRLFSNSAFSYACIMTICNAVVVGIAYISISWHLLSLRNSIEVIMLFMFTWYICGFIITTYRLVMLIGSLLA TLCSFKIIPKRNVKNTKISFLRNWQEVISFLNQNKTLYWCYLAQIGMTCLYMIAPVFISPYAKNILKASSLEFGLIEVTF SVGFIVGNVLLPYMIEKISPKQTLVFSMTISALMYLLLGLNESIFFASIYYLVAGIFISAWVIIVTIAQKNTPITLQGKI QGICYGFSGLVVMFIYLIFFAINYIHYLVINGSTSWQC >Mature_278_residues MLSYFKARSRLFSNSAFSYACIMTICNAVVVGIAYISISWHLLSLRNSIEVIMLFMFTWYICGFIITTYRLVMLIGSLLA TLCSFKIIPKRNVKNTKISFLRNWQEVISFLNQNKTLYWCYLAQIGMTCLYMIAPVFISPYAKNILKASSLEFGLIEVTF SVGFIVGNVLLPYMIEKISPKQTLVFSMTISALMYLLLGLNESIFFASIYYLVAGIFISAWVIIVTIAQKNTPITLQGKI QGICYGFSGLVVMFIYLIFFAINYIHYLVINGSTSWQC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31632; Mature: 31632
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSYFKARSRLFSNSAFSYACIMTICNAVVVGIAYISISWHLLSLRNSIEVIMLFMFTWY CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ICGFIITTYRLVMLIGSLLATLCSFKIIPKRNVKNTKISFLRNWQEVISFLNQNKTLYWC HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEH YLAQIGMTCLYMIAPVFISPYAKNILKASSLEFGLIEVTFSVGFIVGNVLLPYMIEKISP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC KQTLVFSMTISALMYLLLGLNESIFFASIYYLVAGIFISAWVIIVTIAQKNTPITLQGKI CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEE QGICYGFSGLVVMFIYLIFFAINYIHYLVINGSTSWQC EEEEECHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC >Mature Secondary Structure MLSYFKARSRLFSNSAFSYACIMTICNAVVVGIAYISISWHLLSLRNSIEVIMLFMFTWY CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ICGFIITTYRLVMLIGSLLATLCSFKIIPKRNVKNTKISFLRNWQEVISFLNQNKTLYWC HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEH YLAQIGMTCLYMIAPVFISPYAKNILKASSLEFGLIEVTFSVGFIVGNVLLPYMIEKISP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC KQTLVFSMTISALMYLLLGLNESIFFASIYYLVAGIFISAWVIIVTIAQKNTPITLQGKI CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEE QGICYGFSGLVVMFIYLIFFAINYIHYLVINGSTSWQC EEEEECHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA