Click here to switch to the map view.

The map label for this gene is 89256841

Identifier: 89256841

GI number: 89256841

Start: 1488815

End: 1489495

Strand: Reverse

Name: 89256841

Synonym: FTL_1557

Alternate gene names: NA

Gene position: 1489495-1488815 (Counterclockwise)

Preceding gene: 89256842

Following gene: 89256836

Centisome position: 78.56

GC content: 30.98

Gene sequence:

>681_bases
ATGTCGAGAGTTTATGATAAGTTTATTATTTCTGAGTTGATTCAGGGTAAAGAATATTTTGTAGATGCTTTTTCTATTAA
TGGAAAACATTATATATCTTCAATTCAGAAGTATGATAAGCTAATCTTTAAAGGTACGCCGATTCCCATATCATCAGAAC
TTGAAAAAGATCCAACTATTCTAGATATAATCACTCAATACATAGAGCCAGTCCTTACAGCACTAGGTTTAGAAAATGGT
TTCTCTCATAGTGAGCTTTTTCTTACGGCAGATAATAAACCGGTATTAATAGAGTTAAATCCTAGAGTGTCTGGAGCAAC
TGGGGCTGCAAATATTACTGCTGCATTCGCTGGTAATAATACCCAATTAGATATATTTGCCGAGAAGATCTTAGCTAGAA
ATATACCACAAAGGCAAGCAATGTTTGCAAAAACACTGTATTTGTATAATTTTACTAACAATCCATTAATTGATCTTAAC
ACTTTAAAATCTACGTTTTCATCTATAAAAGTAGTTAATCAGCTAAAGCCTATTGGTTATGTTAGGAATCATGACTCAAA
TTTATCAATACTTGATATTGTTGCCTTTATGGTATTACAAAATGATAGTTTTGAAAAGCTAGAAAAAGATGCTCAACAAA
TACTTAAATGCGATATAGAAACAGGTTATACAATTGTATAA

Upstream 100 bases:

>100_bases
CTTGTTTTATAAAGCCCTTAGATGGTAGTGCAAGTATAGGTGCCCAACGCTTAAACTCTGATATCGACAAAGAGAATTAT
ATGCAACAGTAGTATCACCA

Downstream 100 bases:

>100_bases
ATTTATTTAAATACAAGTAATATACCCTAAGTTTTAATTTAAATTGCTTGCTTTAATATGTTTAAGAAGAGTTAGATTTA
GGCAAAATTTTTTGTTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSRVYDKFIISELIQGKEYFVDAFSINGKHYISSIQKYDKLIFKGTPIPISSELEKDPTILDIITQYIEPVLTALGLENG
FSHSELFLTADNKPVLIELNPRVSGATGAANITAAFAGNNTQLDIFAEKILARNIPQRQAMFAKTLYLYNFTNNPLIDLN
TLKSTFSSIKVVNQLKPIGYVRNHDSNLSILDIVAFMVLQNDSFEKLEKDAQQILKCDIETGYTIV

Sequences:

>Translated_226_residues
MSRVYDKFIISELIQGKEYFVDAFSINGKHYISSIQKYDKLIFKGTPIPISSELEKDPTILDIITQYIEPVLTALGLENG
FSHSELFLTADNKPVLIELNPRVSGATGAANITAAFAGNNTQLDIFAEKILARNIPQRQAMFAKTLYLYNFTNNPLIDLN
TLKSTFSSIKVVNQLKPIGYVRNHDSNLSILDIVAFMVLQNDSFEKLEKDAQQILKCDIETGYTIV
>Mature_225_residues
SRVYDKFIISELIQGKEYFVDAFSINGKHYISSIQKYDKLIFKGTPIPISSELEKDPTILDIITQYIEPVLTALGLENGF
SHSELFLTADNKPVLIELNPRVSGATGAANITAAFAGNNTQLDIFAEKILARNIPQRQAMFAKTLYLYNFTNNPLIDLNT
LKSTFSSIKVVNQLKPIGYVRNHDSNLSILDIVAFMVLQNDSFEKLEKDAQQILKCDIETGYTIV

Specific function: Unknown

COG id: COG0439

COG function: function code I; Biotin carboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25360; Mature: 25229

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS50975 ATP_GRASP ; PS00867 CPSASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVYDKFIISELIQGKEYFVDAFSINGKHYISSIQKYDKLIFKGTPIPISSELEKDPTI
CCHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
LDIITQYIEPVLTALGLENGFSHSELFLTADNKPVLIELNPRVSGATGAANITAAFAGNN
HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCC
TQLDIFAEKILARNIPQRQAMFAKTLYLYNFTNNPLIDLNTLKSTFSSIKVVNQLKPIGY
CCHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHHCCCCE
VRNHDSNLSILDIVAFMVLQNDSFEKLEKDAQQILKCDIETGYTIV
EECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEC
>Mature Secondary Structure 
SRVYDKFIISELIQGKEYFVDAFSINGKHYISSIQKYDKLIFKGTPIPISSELEKDPTI
CHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
LDIITQYIEPVLTALGLENGFSHSELFLTADNKPVLIELNPRVSGATGAANITAAFAGNN
HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCC
TQLDIFAEKILARNIPQRQAMFAKTLYLYNFTNNPLIDLNTLKSTFSSIKVVNQLKPIGY
CCHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHHCCCCE
VRNHDSNLSILDIVAFMVLQNDSFEKLEKDAQQILKCDIETGYTIV
EECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA