Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is pnuC [H]
Identifier: 89256814
GI number: 89256814
Start: 1459525
End: 1460289
Strand: Reverse
Name: pnuC [H]
Synonym: FTL_1529
Alternate gene names: 89256814
Gene position: 1460289-1459525 (Counterclockwise)
Preceding gene: 89256815
Following gene: 89256813
Centisome position: 77.02
GC content: 26.8
Gene sequence:
>765_bases ATGAATATTCAAGTTATTAATGATTTTTTTTCGCGACTAGCAAATTATTTTCGAGGATTTAAAAATATAAAGCTTTCGAA TATTTTTAATGATTGGAATATTTTTGAAATATTGTGGCTAGTGATTTCTGTAACTAGTCTAGGAATTATAAGTATTTTAA CAACAAATGATTATTTAGTTATTACAACTATAGCTACCGTTACTGGTATGCTAAATATTTTATTAGTAGCTAAAGGTAAA ATTATTAATTATTTTTTTGCATTTATTAATAACCTTACTTATGCATATGTTTGCTATAATCAAGGTATTTATGGCCAATT TTTACTCTTTACCTTTTTCTTTTTTCCTATGCAGTTTTATGGTTTATACACTTGGACTAAACCACAAAATATTAGCGAGA ATAATGATATCATTACAAAGAGTTTATCAGTAAAACAAAGAACCTATCTTACCATAGCTATAATTATTGCGACATATATT TATGGGACTTTTATTTTAAAGGGTTATTTTAACCAACAAGTTGGTTTGATTGCCGATTCATTGACTGGTGTAGTATCCGT TGTAGCTATTATCCTGATGGTTAAAGCCTATATTGAACAATGGGTTTTATGGATTATAATAAATATACTTTCAACGATTA TTTGGTTGCAACAATATTTTTCTGGCACAGGTGAAGGTATAGCGTTTTTAGCTATGTGGCTTATTTATCTGTTAAATGCT TTATATGGCTATATAAACTGGATAAAATTAAAAAAGATTGATTAA
Upstream 100 bases:
>100_bases TATGCAGAATGTGACTTTAAGCTAGCTAAACTTGGAGATCAAGCAGGTATTTATGGAGCTATGGAGCTAGTTGCTGGTTA ATCTATTTAGGATATATTGT
Downstream 100 bases:
>100_bases AATTTCTTTGTGAAACTTTTGATATAACTAACTTAACTTAATTAAAAGCTTTCTATATAATTTGCAATATTCATTATATA TCTTTCTTTGGAGGTTAGAG
Product: nicotinamide mononucleotide transport (NMT) family protein
Products: nicotinamide nucleotide [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MNIQVINDFFSRLANYFRGFKNIKLSNIFNDWNIFEILWLVISVTSLGIISILTTNDYLVITTIATVTGMLNILLVAKGK IINYFFAFINNLTYAYVCYNQGIYGQFLLFTFFFFPMQFYGLYTWTKPQNISENNDIITKSLSVKQRTYLTIAIIIATYI YGTFILKGYFNQQVGLIADSLTGVVSVVAIILMVKAYIEQWVLWIIINILSTIIWLQQYFSGTGEGIAFLAMWLIYLLNA LYGYINWIKLKKID
Sequences:
>Translated_254_residues MNIQVINDFFSRLANYFRGFKNIKLSNIFNDWNIFEILWLVISVTSLGIISILTTNDYLVITTIATVTGMLNILLVAKGK IINYFFAFINNLTYAYVCYNQGIYGQFLLFTFFFFPMQFYGLYTWTKPQNISENNDIITKSLSVKQRTYLTIAIIIATYI YGTFILKGYFNQQVGLIADSLTGVVSVVAIILMVKAYIEQWVLWIIINILSTIIWLQQYFSGTGEGIAFLAMWLIYLLNA LYGYINWIKLKKID >Mature_254_residues MNIQVINDFFSRLANYFRGFKNIKLSNIFNDWNIFEILWLVISVTSLGIISILTTNDYLVITTIATVTGMLNILLVAKGK IINYFFAFINNLTYAYVCYNQGIYGQFLLFTFFFFPMQFYGLYTWTKPQNISENNDIITKSLSVKQRTYLTIAIIIATYI YGTFILKGYFNQQVGLIADSLTGVVSVVAIILMVKAYIEQWVLWIIINILSTIIWLQQYFSGTGEGIAFLAMWLIYLLNA LYGYINWIKLKKID
Specific function: Required for nicotinamide riboside transport across the inner membrane [H]
COG id: COG3201
COG function: function code H; Nicotinamide mononucleotide transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nicotinamide ribonucleoside (NR) uptake permease (TC 4.B.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006419 [H]
Pfam domain/function: PF04973 NMN_transporter [H]
EC number: NA
Molecular weight: Translated: 29401; Mature: 29401
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIQVINDFFSRLANYFRGFKNIKLSNIFNDWNIFEILWLVISVTSLGIISILTTNDYLV CCEEEHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHEEEEECCCEEE ITTIATVTGMLNILLVAKGKIINYFFAFINNLTYAYVCYNQGIYGQFLLFTFFFFPMQFY EHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHH GLYTWTKPQNISENNDIITKSLSVKQRTYLTIAIIIATYIYGTFILKGYFNQQVGLIADS HEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LTGVVSVVAIILMVKAYIEQWVLWIIINILSTIIWLQQYFSGTGEGIAFLAMWLIYLLNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LYGYINWIKLKKID HHHHHHHHEEEECC >Mature Secondary Structure MNIQVINDFFSRLANYFRGFKNIKLSNIFNDWNIFEILWLVISVTSLGIISILTTNDYLV CCEEEHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHEEEEECCCEEE ITTIATVTGMLNILLVAKGKIINYFFAFINNLTYAYVCYNQGIYGQFLLFTFFFFPMQFY EHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHH GLYTWTKPQNISENNDIITKSLSVKQRTYLTIAIIIATYIYGTFILKGYFNQQVGLIADS HEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LTGVVSVVAIILMVKAYIEQWVLWIIINILSTIIWLQQYFSGTGEGIAFLAMWLIYLLNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LYGYINWIKLKKID HHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nicotinamide nucleotide [Periplasm] [C]
Specific reaction: nicotinamide nucleotide [Periplasm] = nicotinamide nucleotide [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12446641; 7542800 [H]