Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
---|---|
Accession | NC_007880 |
Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is guaB [H]
Identifier: 89256767
GI number: 89256767
Start: 1403186
End: 1404646
Strand: Reverse
Name: guaB [H]
Synonym: FTL_1478
Alternate gene names: 89256767
Gene position: 1404646-1403186 (Counterclockwise)
Preceding gene: 89256768
Following gene: 89256766
Centisome position: 74.08
GC content: 38.4
Gene sequence:
>1461_bases ATGTTAAGAATTACTCAGCAGGCAATCACTTTTGATGATGTATTGCTATCACCTAGATATTCAAATGTTCTTCCTCATCA AGTTGATTTGAAGACAAATATAACTAGAGATATTCAGTTAAATATTCCTTTAGTATCTGCAGCTATGGATACGGTTACTG AGTCACGCCTAGCTATTGCGATAGCCCAGGAAGGTGGTATTGGTATTATTCATAAGAATATGTCTATTCAAGCCCAAGCC CAAGAAGTTAAAAAGGTAAAAAGATTTGAAAATGGAATGGTGATTGATCCCATTACCATTAAACAAGAAAGCTCAATTAA AGAAATCATGCAACTAGCTAAAGAACATAATTTCTCTGGTTTTCCCGTTGTTGATGATAATAATAAAATCATAGGTATTG TTACAAGGCGTGATTTTAGATTTGCAAAAGATTTAGATGAACCTGTTAGCTCTATTATGACACCTAGAGAAAAACTTGTA ACAGTGCCTGAAGATGCTTCTCAAGGAGCGATTAAAAAGAAACTTCATGAGCATAAAATTGAGAAGTTGCTTGTAGTTAA TGAACAAGGCGAGTTGGTCGGTCTTATTACAACAAAAGATATCGAAAGATCACAAAATAAACCAAATGCTTGTAAAGATT CTCTTGGGCGTTTGAGAGTTGGCGCTGCTGTTGGAACCGCTGTTAATACTAAAGAGCGTGTTGCAGCATTGGCAGCTGAA GGAGTCGATATTATTGTTGTAGATACTGCTCATGGACATTCACAAGGTGTGTTAGATACAGTTAAGTGGGTTAAAGATAA CTATCCACATATTCAGGTTATAGGTGGTAATATCGCTACAGCAGAAGCTGCTAAAGATCTAGTTAAAGCTGGTGCTGATG CTGTCAAGGTTGGTATTGGACCTGGCTCAATCTGTACTACCAGAATTGTTGCTGGTGTTGGTGTACCACAAATTACAGCG ATAGCTAATGTTGCAGAGGCATTAAAAGGAACTGGAGTGCCTGTGATTGCAGATGGCGGTATTAGATATTCCGGTGATAT TGCAAAAGCTATAGTTGCTGGAGCATCTGTAGTTATGATTGGAGGGCTTTTTGCAGGTACTGAAGAATCACCAGGGGAGG TTGAGCTTTTCCAAGGTCGCTCTTATAAATCATATCGTGGTATGGGTTCTCTTGGTGCTATGGAGAAAGGCTCATCTGAT AGATATTTCCAAAGTGAAACAGAGGCGAAAAAGTTTGTTCCAGAAGGCGTTGAAGGCAGAGTACCATACAAAGGTTTATT ATCTGCAGTGATTCATCAGCTAATAGGTGGTCTGAAATCTAGTATGGGCTATACTGGCTCAAAAGATATCCAAACAATGC GAACAGAACCGACATTTGTACAAATTACAGGTGCTGGATTTAATGAATCGCATGTACATAACGTCACGATTACTAAAGAA CCACCTAATTACCAGTCTTAA
Upstream 100 bases:
>100_bases TAAATTCTAATACTTATTTCTGGCATATTTTTTCTTATATGGTAAAATAGTTCTGTAATTAAATTCATACTCTTTAGATT TTAATTACGGAGATCAAAAA
Downstream 100 bases:
>100_bases AACCTCTTAATTATGATTTTAATAAGTTATAATCTATTAAATTTTACTTAATATTTAATAACTCAATGTCTGAAGCGATA CTTTTTCTAAATGGTAAAGT
Product: inosine-5-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MLRITQQAITFDDVLLSPRYSNVLPHQVDLKTNITRDIQLNIPLVSAAMDTVTESRLAIAIAQEGGIGIIHKNMSIQAQA QEVKKVKRFENGMVIDPITIKQESSIKEIMQLAKEHNFSGFPVVDDNNKIIGIVTRRDFRFAKDLDEPVSSIMTPREKLV TVPEDASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIERSQNKPNACKDSLGRLRVGAAVGTAVNTKERVAALAAE GVDIIVVDTAHGHSQGVLDTVKWVKDNYPHIQVIGGNIATAEAAKDLVKAGADAVKVGIGPGSICTTRIVAGVGVPQITA IANVAEALKGTGVPVIADGGIRYSGDIAKAIVAGASVVMIGGLFAGTEESPGEVELFQGRSYKSYRGMGSLGAMEKGSSD RYFQSETEAKKFVPEGVEGRVPYKGLLSAVIHQLIGGLKSSMGYTGSKDIQTMRTEPTFVQITGAGFNESHVHNVTITKE PPNYQS
Sequences:
>Translated_486_residues MLRITQQAITFDDVLLSPRYSNVLPHQVDLKTNITRDIQLNIPLVSAAMDTVTESRLAIAIAQEGGIGIIHKNMSIQAQA QEVKKVKRFENGMVIDPITIKQESSIKEIMQLAKEHNFSGFPVVDDNNKIIGIVTRRDFRFAKDLDEPVSSIMTPREKLV TVPEDASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIERSQNKPNACKDSLGRLRVGAAVGTAVNTKERVAALAAE GVDIIVVDTAHGHSQGVLDTVKWVKDNYPHIQVIGGNIATAEAAKDLVKAGADAVKVGIGPGSICTTRIVAGVGVPQITA IANVAEALKGTGVPVIADGGIRYSGDIAKAIVAGASVVMIGGLFAGTEESPGEVELFQGRSYKSYRGMGSLGAMEKGSSD RYFQSETEAKKFVPEGVEGRVPYKGLLSAVIHQLIGGLKSSMGYTGSKDIQTMRTEPTFVQITGAGFNESHVHNVTITKE PPNYQS >Mature_486_residues MLRITQQAITFDDVLLSPRYSNVLPHQVDLKTNITRDIQLNIPLVSAAMDTVTESRLAIAIAQEGGIGIIHKNMSIQAQA QEVKKVKRFENGMVIDPITIKQESSIKEIMQLAKEHNFSGFPVVDDNNKIIGIVTRRDFRFAKDLDEPVSSIMTPREKLV TVPEDASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIERSQNKPNACKDSLGRLRVGAAVGTAVNTKERVAALAAE GVDIIVVDTAHGHSQGVLDTVKWVKDNYPHIQVIGGNIATAEAAKDLVKAGADAVKVGIGPGSICTTRIVAGVGVPQITA IANVAEALKGTGVPVIADGGIRYSGDIAKAIVAGASVVMIGGLFAGTEESPGEVELFQGRSYKSYRGMGSLGAMEKGSSD RYFQSETEAKKFVPEGVEGRVPYKGLLSAVIHQLIGGLKSSMGYTGSKDIQTMRTEPTFVQITGAGFNESHVHNVTITKE PPNYQS
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=480, Percent_Identity=41.6666666666667, Blast_Score=356, Evalue=3e-98, Organism=Homo sapiens, GI217035146, Length=461, Percent_Identity=41.4316702819957, Blast_Score=352, Evalue=4e-97, Organism=Homo sapiens, GI34328930, Length=461, Percent_Identity=41.4316702819957, Blast_Score=351, Evalue=8e-97, Organism=Homo sapiens, GI34328928, Length=461, Percent_Identity=41.4316702819957, Blast_Score=351, Evalue=8e-97, Organism=Homo sapiens, GI156616279, Length=461, Percent_Identity=41.4316702819957, Blast_Score=351, Evalue=8e-97, Organism=Homo sapiens, GI217035152, Length=450, Percent_Identity=42, Blast_Score=346, Evalue=3e-95, Organism=Homo sapiens, GI217035148, Length=461, Percent_Identity=40.5639913232104, Blast_Score=338, Evalue=5e-93, Organism=Homo sapiens, GI217035150, Length=461, Percent_Identity=38.3947939262473, Blast_Score=312, Evalue=4e-85, Organism=Homo sapiens, GI156104880, Length=246, Percent_Identity=36.9918699186992, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI50541956, Length=248, Percent_Identity=37.5, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI50541954, Length=247, Percent_Identity=37.246963562753, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI50541952, Length=247, Percent_Identity=37.246963562753, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI50541948, Length=247, Percent_Identity=37.246963562753, Blast_Score=162, Evalue=6e-40, Organism=Escherichia coli, GI1788855, Length=485, Percent_Identity=61.8556701030928, Blast_Score=603, Evalue=1e-174, Organism=Escherichia coli, GI1786293, Length=221, Percent_Identity=34.841628959276, Blast_Score=150, Evalue=2e-37, Organism=Caenorhabditis elegans, GI71994385, Length=472, Percent_Identity=40.0423728813559, Blast_Score=318, Evalue=5e-87, Organism=Caenorhabditis elegans, GI71994389, Length=427, Percent_Identity=41.2177985948478, Blast_Score=305, Evalue=3e-83, Organism=Caenorhabditis elegans, GI17560440, Length=257, Percent_Identity=36.5758754863813, Blast_Score=174, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6323585, Length=494, Percent_Identity=39.2712550607287, Blast_Score=334, Evalue=2e-92, Organism=Saccharomyces cerevisiae, GI6322012, Length=486, Percent_Identity=39.7119341563786, Blast_Score=334, Evalue=2e-92, Organism=Saccharomyces cerevisiae, GI6323464, Length=464, Percent_Identity=39.2241379310345, Blast_Score=325, Evalue=7e-90, Organism=Saccharomyces cerevisiae, GI6319352, Length=342, Percent_Identity=38.8888888888889, Blast_Score=251, Evalue=3e-67, Organism=Saccharomyces cerevisiae, GI6319353, Length=114, Percent_Identity=41.2280701754386, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24641071, Length=483, Percent_Identity=40.3726708074534, Blast_Score=346, Evalue=2e-95, Organism=Drosophila melanogaster, GI24641073, Length=483, Percent_Identity=40.3726708074534, Blast_Score=346, Evalue=2e-95, Organism=Drosophila melanogaster, GI28571163, Length=441, Percent_Identity=41.0430839002268, Blast_Score=314, Evalue=7e-86,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52092; Mature: 52092
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRITQQAITFDDVLLSPRYSNVLPHQVDLKTNITRDIQLNIPLVSAAMDTVTESRLAIA CCEECCHHHHHHHHEECCCCCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHCCEEEEE IAQEGGIGIIHKNMSIQAQAQEVKKVKRFENGMVIDPITIKQESSIKEIMQLAKEHNFSG EECCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCEEECCHHHHHHHHHHHHHCCCCC FPVVDDNNKIIGIVTRRDFRFAKDLDEPVSSIMTPREKLVTVPEDASQGAIKKKLHEHKI CCEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCHHHEEECCCCCCCHHHHHHHHHHHH EKLLVVNEQGELVGLITTKDIERSQNKPNACKDSLGRLRVGAAVGTAVNTKERVAALAAE CEEEEECCCCCEEEEEEECCHHHCCCCCCHHHHHHHHEEECHHHCCCCCCHHHHHHHHHC GVDIIVVDTAHGHSQGVLDTVKWVKDNYPHIQVIGGNIATAEAAKDLVKAGADAVKVGIG CCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHCCCCEEEEECC PGSICTTRIVAGVGVPQITAIANVAEALKGTGVPVIADGGIRYSGDIAKAIVAGASVVMI CCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHCCCCEEEE GGLFAGTEESPGEVELFQGRSYKSYRGMGSLGAMEKGSSDRYFQSETEAKKFVPEGVEGR EEEEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC VPYKGLLSAVIHQLIGGLKSSMGYTGSKDIQTMRTEPTFVQITGAGFNESHVHNVTITKE CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCCEEEEEEECC PPNYQS CCCCCC >Mature Secondary Structure MLRITQQAITFDDVLLSPRYSNVLPHQVDLKTNITRDIQLNIPLVSAAMDTVTESRLAIA CCEECCHHHHHHHHEECCCCCCCCCCEEEECCCCCEEEEECCCHHHHHHHHHHCCEEEEE IAQEGGIGIIHKNMSIQAQAQEVKKVKRFENGMVIDPITIKQESSIKEIMQLAKEHNFSG EECCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCEEECCHHHHHHHHHHHHHCCCCC FPVVDDNNKIIGIVTRRDFRFAKDLDEPVSSIMTPREKLVTVPEDASQGAIKKKLHEHKI CCEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCHHHEEECCCCCCCHHHHHHHHHHHH EKLLVVNEQGELVGLITTKDIERSQNKPNACKDSLGRLRVGAAVGTAVNTKERVAALAAE CEEEEECCCCCEEEEEEECCHHHCCCCCCHHHHHHHHEEECHHHCCCCCCHHHHHHHHHC GVDIIVVDTAHGHSQGVLDTVKWVKDNYPHIQVIGGNIATAEAAKDLVKAGADAVKVGIG CCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHCCCCEEEEECC PGSICTTRIVAGVGVPQITAIANVAEALKGTGVPVIADGGIRYSGDIAKAIVAGASVVMI CCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHCCCCEEEE GGLFAGTEESPGEVELFQGRSYKSYRGMGSLGAMEKGSSDRYFQSETEAKKFVPEGVEGR EEEEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC VPYKGLLSAVIHQLIGGLKSSMGYTGSKDIQTMRTEPTFVQITGAGFNESHVHNVTITKE CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECCCCCCCCEEEEEEECC PPNYQS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA