Click here to switch to the map view.

The map label for this gene is deoD [H]

Identifier: 89256750

GI number: 89256750

Start: 1385873

End: 1386595

Strand: Reverse

Name: deoD [H]

Synonym: FTL_1461

Alternate gene names: 89256750

Gene position: 1386595-1385873 (Counterclockwise)

Preceding gene: 89256753

Following gene: 89256747

Centisome position: 73.13

GC content: 33.33

Gene sequence:

>723_bases
ATGTCATTGCCTACTCCTCATATAGAAACATTAAGAAAAGAAGAATTTGCTAAAACAGTAATTATGCCAGGCGATCCACT
AAGAGCTAAATACATTGCTGATAACTACCTAGAAAATGTTGTTAGAGTGAATGCTGTTAGAAATATGTTTGGCTATACAG
GCACTTACAAGGGTAAGAAAGTTAGTGTTATGGGATCTGGTATGGGTATGCCAAGTATGGGTATCTATGCTTATGAGCTT
TTTAAGTATTATGATGTAGATAATATTATTAGAGTTGGTTCAGCTGGATCATACAAAGCTGAATTTAAAGTTTATGATGT
TGTTCTTATCGAAGAGAGTTATTGTGAATCTAATTTTATTGAAATTGTTACAGGAAGTAAAACTAGTGATGTAAGATCAT
CGGAAGAACTTAATAAAGAACTTATTGCATCTGCACAAAGACAAGATATCGAGCTTAAGAAAGCAAAAGCACATTGTACA
GATGTTTTTTATAGAAAAAATTCTGATGATTATAAAAAAATAGTCAAAAAATACAACTGTGATTTAGTTGAAATGGAGAC
AGCGGCTTTATTTGCTACAGCAGCGGAGTTAGGCAAAAAAGCTTCTGCAGTTGTAACTATCTCTGACAGCTTTATAACCG
GTGAATCTACTACAGCTCAACAGCGAGAGCAATCTTTCACAAATATGATGGAAGTTGCTTTAGGTACTATCAAAGAAAAC
TAA

Upstream 100 bases:

>100_bases
TGTGTTTAACAAAATACTCTCGGATTAACTATAAAACTAAGATTTTTGCTTAAATTATGCTAATATAATCTCAAAGAACT
TAAGAATAAAGGAATAAGAT

Downstream 100 bases:

>100_bases
TCAATTTCTTTGTTTAAATCTCTACAAAATTGTTTTTTAATTTTATCTAATGCTTGTTTAGCAGTCTCATTATTTACACT
AGAGTTTGTTTTATTATTGT

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: PNP [H]

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSLPTPHIETLRKEEFAKTVIMPGDPLRAKYIADNYLENVVRVNAVRNMFGYTGTYKGKKVSVMGSGMGMPSMGIYAYEL
FKYYDVDNIIRVGSAGSYKAEFKVYDVVLIEESYCESNFIEIVTGSKTSDVRSSEELNKELIASAQRQDIELKKAKAHCT
DVFYRKNSDDYKKIVKKYNCDLVEMETAALFATAAELGKKASAVVTISDSFITGESTTAQQREQSFTNMMEVALGTIKEN

Sequences:

>Translated_240_residues
MSLPTPHIETLRKEEFAKTVIMPGDPLRAKYIADNYLENVVRVNAVRNMFGYTGTYKGKKVSVMGSGMGMPSMGIYAYEL
FKYYDVDNIIRVGSAGSYKAEFKVYDVVLIEESYCESNFIEIVTGSKTSDVRSSEELNKELIASAQRQDIELKKAKAHCT
DVFYRKNSDDYKKIVKKYNCDLVEMETAALFATAAELGKKASAVVTISDSFITGESTTAQQREQSFTNMMEVALGTIKEN
>Mature_239_residues
SLPTPHIETLRKEEFAKTVIMPGDPLRAKYIADNYLENVVRVNAVRNMFGYTGTYKGKKVSVMGSGMGMPSMGIYAYELF
KYYDVDNIIRVGSAGSYKAEFKVYDVVLIEESYCESNFIEIVTGSKTSDVRSSEELNKELIASAQRQDIELKKAKAHCTD
VFYRKNSDDYKKIVKKYNCDLVEMETAALFATAAELGKKASAVVTISDSFITGESTTAQQREQSFTNMMEVALGTIKEN

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI1790844, Length=235, Percent_Identity=39.1489361702128, Blast_Score=171, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845 [H]

Pfam domain/function: PF01048 PNP_UDP_1 [H]

EC number: =2.4.2.1 [H]

Molecular weight: Translated: 26866; Mature: 26735

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS01232 PNP_UDP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPTPHIETLRKEEFAKTVIMPGDPLRAKYIADNYLENVVRVNAVRNMFGYTGTYKGKK
CCCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
VSVMGSGMGMPSMGIYAYELFKYYDVDNIIRVGSAGSYKAEFKVYDVVLIEESYCESNFI
EEEEECCCCCCCCHHHHHHHHHHHCHHHHEEECCCCCCEEEEEEEEEEEEECCCCCCCCE
EIVTGSKTSDVRSSEELNKELIASAQRQDIELKKAKAHCTDVFYRKNSDDYKKIVKKYNC
EEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHCC
DLVEMETAALFATAAELGKKASAVVTISDSFITGESTTAQQREQSFTNMMEVALGTIKEN
CEEEHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLPTPHIETLRKEEFAKTVIMPGDPLRAKYIADNYLENVVRVNAVRNMFGYTGTYKGKK
CCCCCHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
VSVMGSGMGMPSMGIYAYELFKYYDVDNIIRVGSAGSYKAEFKVYDVVLIEESYCESNFI
EEEEECCCCCCCCHHHHHHHHHHHCHHHHEEECCCCCCEEEEEEEEEEEEECCCCCCCCE
EIVTGSKTSDVRSSEELNKELIASAQRQDIELKKAKAHCTDVFYRKNSDDYKKIVKKYNC
EEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCHHHHHHHHHHCC
DLVEMETAALFATAAELGKKASAVVTISDSFITGESTTAQQREQSFTNMMEVALGTIKEN
CEEEHHHHHHHHHHHHHCCCCEEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA