Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256744
Identifier: 89256744
GI number: 89256744
Start: 1378117
End: 1378494
Strand: Reverse
Name: 89256744
Synonym: FTL_1451
Alternate gene names: NA
Gene position: 1378494-1378117 (Counterclockwise)
Preceding gene: 89256745
Following gene: 89256741
Centisome position: 72.71
GC content: 35.45
Gene sequence:
>378_bases ATGTCAGAACAAAAAAATGTCTTAGGAACTGCTCTAAAATCATGTTGTTTAAAACCAAAGACGGGATTTTATCGAGATGG ATTTTGTCGTACTGATAATCATGACTATGGTCGCCATGTTGTATGTGCAATAATGACTCAAGAGTTTTTAGAGTATACTG CATCTAGAGGTAATGATTTATCTACACCAAATCCTTTTTTTGATTTTCCTGGGCTTAAACCTGGAGATAAATGGTGTTTG TGTGCTCTGCGATGGTTAGAGGCATATCAAAATGGTGTTGCGCCAGAAGTTGTACTTGAATCAACTCATCAATCAGCTCT TGATGTAATCAAAAAAGAATATCTATTTGAGAAAGCCTATTCTAATGTCAATGCTTAG
Upstream 100 bases:
>100_bases ATATTACTAATATCTCTAAAACTTTAAACTAAAAATATTTATTTTATAACTACCTTATTTTATTATATTTACTATATGTA AAATCATTTATTAATTAAAT
Downstream 100 bases:
>100_bases TTAGATTGTTGTAGTTTCGCTTTTTGGTTTAATCTATGTATTCCAAATAGTATCACTATAGTAATCAACACAAAAACTAG TTGAGTATAAGGAGAGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MSEQKNVLGTALKSCCLKPKTGFYRDGFCRTDNHDYGRHVVCAIMTQEFLEYTASRGNDLSTPNPFFDFPGLKPGDKWCL CALRWLEAYQNGVAPEVVLESTHQSALDVIKKEYLFEKAYSNVNA
Sequences:
>Translated_125_residues MSEQKNVLGTALKSCCLKPKTGFYRDGFCRTDNHDYGRHVVCAIMTQEFLEYTASRGNDLSTPNPFFDFPGLKPGDKWCL CALRWLEAYQNGVAPEVVLESTHQSALDVIKKEYLFEKAYSNVNA >Mature_124_residues SEQKNVLGTALKSCCLKPKTGFYRDGFCRTDNHDYGRHVVCAIMTQEFLEYTASRGNDLSTPNPFFDFPGLKPGDKWCLC ALRWLEAYQNGVAPEVVLESTHQSALDVIKKEYLFEKAYSNVNA
Specific function: Unknown
COG id: COG3651
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14150; Mature: 14019
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQKNVLGTALKSCCLKPKTGFYRDGFCRTDNHDYGRHVVCAIMTQEFLEYTASRGNDL CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC STPNPFFDFPGLKPGDKWCLCALRWLEAYQNGVAPEVVLESTHQSALDVIKKEYLFEKAY CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SNVNA HCCCC >Mature Secondary Structure SEQKNVLGTALKSCCLKPKTGFYRDGFCRTDNHDYGRHVVCAIMTQEFLEYTASRGNDL CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC STPNPFFDFPGLKPGDKWCLCALRWLEAYQNGVAPEVVLESTHQSALDVIKKEYLFEKAY CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SNVNA HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA