Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

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The map label for this gene is 89256718

Identifier: 89256718

GI number: 89256718

Start: 1355197

End: 1355958

Strand: Reverse

Name: 89256718

Synonym: FTL_1425

Alternate gene names: NA

Gene position: 1355958-1355197 (Counterclockwise)

Preceding gene: 89256719

Following gene: 89256717

Centisome position: 71.52

GC content: 23.1

Gene sequence:

>762_bases
TTGTCTTTAATTCGTAAAATAAAATTATCTCTTCGTAATATTATTCATACAATATTAGAAAATAAAAGAAATAAGTTTTT
GAAACGTAACGGCTTAGAAGTTTTAAAGTACACCACCAATCTTTTGCGTGATGAAAATATAAAGCATTGGATCGATGGAG
GAACTCTTTTGGGTATAATTAGAGATAAGGATTTCATTGTTAGAGATACAGATATTGATATTGGTATTTTAATTGATAGA
CCAGACTTTTTGTATGAGGTATTAGAAAAAAATAATTATCATATTGTTTATTATTATGTCGATCAAAATAATAAGAAATT
TTTAATTAGAGCAGAAATATATAATGTAGGTATTGATTTTGAAATATTTTTTGAAACAAAAGAATTTTATTATTATGATT
CACCAAGACAGCTTACAAAGTTAGCTAGTCGTAAAAAAGATAATCAGTACTCAAGATTAAGGTTTAAGTTTGATAAAAGT
TGTATAAATAATCTATCGTATTATCAGTTTAATGATATTAACCTACCTATACCATCTGATTTAGAGAAATATTTTAGTGT
TTATTATAAATCATGGAATATACCAGTAAATAAGAAGAAGTATTTAAAAGGATATTTTCACGTAGATATTAGTAATTATA
AACATCATAATAATACTGTTATATATATCAAAGATGATTTTTGTTATTTTATCAAAGTTGCACCTAGTTTAATTAATTTG
AAAATTTTAGAATTGCTTAGGTATTTTATAAATAGGAAATAA

Upstream 100 bases:

>100_bases
AATTGGTTTTAATAGTATTGAAAAAATTGATATTTATCCAAAAGAGTATAATCGATGGTCAAATACTCATTTTTATGCTT
TAGTATGTAAGAGGTGAAAT

Downstream 100 bases:

>100_bases
AATCTTTAATGAAATATTGTGAGCTTATAACTTTAGTTATTCCTATATATAATATAGAAAACTATTTAGGTAGATGTTTA
GATTCAGTTATTAATCAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSLIRKIKLSLRNIIHTILENKRNKFLKRNGLEVLKYTTNLLRDENIKHWIDGGTLLGIIRDKDFIVRDTDIDIGILIDR
PDFLYEVLEKNNYHIVYYYVDQNNKKFLIRAEIYNVGIDFEIFFETKEFYYYDSPRQLTKLASRKKDNQYSRLRFKFDKS
CINNLSYYQFNDINLPIPSDLEKYFSVYYKSWNIPVNKKKYLKGYFHVDISNYKHHNNTVIYIKDDFCYFIKVAPSLINL
KILELLRYFINRK

Sequences:

>Translated_253_residues
MSLIRKIKLSLRNIIHTILENKRNKFLKRNGLEVLKYTTNLLRDENIKHWIDGGTLLGIIRDKDFIVRDTDIDIGILIDR
PDFLYEVLEKNNYHIVYYYVDQNNKKFLIRAEIYNVGIDFEIFFETKEFYYYDSPRQLTKLASRKKDNQYSRLRFKFDKS
CINNLSYYQFNDINLPIPSDLEKYFSVYYKSWNIPVNKKKYLKGYFHVDISNYKHHNNTVIYIKDDFCYFIKVAPSLINL
KILELLRYFINRK
>Mature_252_residues
SLIRKIKLSLRNIIHTILENKRNKFLKRNGLEVLKYTTNLLRDENIKHWIDGGTLLGIIRDKDFIVRDTDIDIGILIDRP
DFLYEVLEKNNYHIVYYYVDQNNKKFLIRAEIYNVGIDFEIFFETKEFYYYDSPRQLTKLASRKKDNQYSRLRFKFDKSC
INNLSYYQFNDINLPIPSDLEKYFSVYYKSWNIPVNKKKYLKGYFHVDISNYKHHNNTVIYIKDDFCYFIKVAPSLINLK
ILELLRYFINRK

Specific function: Unknown

COG id: COG3475

COG function: function code M; LPS biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30761; Mature: 30630

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIRKIKLSLRNIIHTILENKRNKFLKRNGLEVLKYTTNLLRDENIKHWIDGGTLLGII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEECCCEEEEEE
RDKDFIVRDTDIDIGILIDRPDFLYEVLEKNNYHIVYYYVDQNNKKFLIRAEIYNVGIDF
ECCCEEEEECCCEEEEEECCHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEEEECCCE
EIFFETKEFYYYDSPRQLTKLASRKKDNQYSRLRFKFDKSCINNLSYYQFNDINLPIPSD
EEEEEEEEEEEECCHHHHHHHHHHCCCCCHHHEEEEECHHHHCCCCEEEECCCCCCCCHH
LEKYFSVYYKSWNIPVNKKKYLKGYFHVDISNYKHHNNTVIYIKDDFCYFIKVAPSLINL
HHHHHHHHHHCCCCCCCHHHHEEEEEEEEECCCEECCCEEEEEECCEEEEEEECCHHHHH
KILELLRYFINRK
HHHHHHHHHHCCC
>Mature Secondary Structure 
SLIRKIKLSLRNIIHTILENKRNKFLKRNGLEVLKYTTNLLRDENIKHWIDGGTLLGII
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEECCCEEEEEE
RDKDFIVRDTDIDIGILIDRPDFLYEVLEKNNYHIVYYYVDQNNKKFLIRAEIYNVGIDF
ECCCEEEEECCCEEEEEECCHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEEEECCCE
EIFFETKEFYYYDSPRQLTKLASRKKDNQYSRLRFKFDKSCINNLSYYQFNDINLPIPSD
EEEEEEEEEEEECCHHHHHHHHHHCCCCCHHHEEEEECHHHHCCCCEEEECCCCCCCCHH
LEKYFSVYYKSWNIPVNKKKYLKGYFHVDISNYKHHNNTVIYIKDDFCYFIKVAPSLINL
HHHHHHHHHHCCCCCCCHHHHEEEEEEEEECCCEECCCEEEEEECCEEEEEEECCHHHHH
KILELLRYFINRK
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA