| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256671
Identifier: 89256671
GI number: 89256671
Start: 1304334
End: 1305683
Strand: Reverse
Name: 89256671
Synonym: FTL_1372
Alternate gene names: NA
Gene position: 1305683-1304334 (Counterclockwise)
Preceding gene: 89256675
Following gene: 89256670
Centisome position: 68.87
GC content: 35.19
Gene sequence:
>1350_bases ATGGAGTTTGAGGTGGCGCATGAATATGTTGGTCATTCATGTGCTGTATATGTAGAGCCATTGAGTCAAACATATGTTGA TCAGTTAGTCAAGAAAGTGATGATTAGTGAAGTAAGGCATGATGTTAGGCAAGTTAATCATAGTTTGAAATGGTATGGTT TAGAGGGTAGTAACTATATTGACTCTGATATATTAACGGAGCTTGATCTGAAGCAGTGTGATGATAGTGTATGTGATGAT ACTAAGAATCCAGTTGCTTACCAATTTCAGCAAGGTCAAGAGTATGTATCATTGGACGTACTAGGTAAGATGACTGTTAA TAACAAAGAATATGATATTAACAAGAAATATAATTTTGTCATAGAACTTATTTCAGCTCCGGTGATATCTGGGAAATGTG ATGACGAAAATGTATGTGTATTTTCTGTTACGAAGGATTCTGAGGGTGGTGTGAAGCCATATAATTACTATTGGTATGAT GGTTATCAGAATGTAGCTATAACCAAATCTACAGTTGATAATGGTGATTTCAAATATGAACTAAAGGATAATCTTAAGTA TAATATAGTGATGTCAACTGGGGATAAATTTGGTCGTAACTATTCAGAAGATTCAAATGAAGTTGTAGTATATGCAGATA TGTATAAAGCGCCTACAGTTGAAATTTTAAGTGAAGATGCTGTTGATGAGGGTAAACAAGCTTTATTAGCAGCTGAAGCG GTTGCATATGGTAATAAGACGATCCAGAAAGATGGTTATAATTGGACTGTTCCTGAAGGATGGGAAATTGTATCAGGTCA AGGTACAAATCTATTGGTAGTTAAAGTTCCAGGATATTCTAAGGATATGCCTAAAGGAAAGTTTAGTGTAGTTGCGACTG ATAGTGAAGGTATAGAGTCGAATGTTGCTACTAAAGAGGTTGCTGTTTTATTTGATAGTTCACTTAAGCCTACAAAGCCA TCATTAGTAGCGGCTGATTTAAATGGTCAGAAAGATGTAGTTGAGAAGAAGCAATACAAAGTAACGGCATTAACTACAGC TAATGGAGATAGAAAGATTGTAAAATATATATGGAAAGTTAATGGTGAAGAGTCTGAGACTACGACTAGTGTATTTACAG ATGTGGCACCTATTTATGATTCTAATGGTGAGAATAAGATAAAAGTAACAGTAATAGCTGTAGATAGTGCTAACCAAAGA TCAGAAGAATCAGCTGAGTTACAGATAGATGTTAAAACTAATACTACAATCAAGCTGACAAGACCATCATTATCGGCGGC TGATTTAAATGGTCAGAAGGATGTAGTTGAGAAGAAAGAATACAAAGTAACAGCCTACAGTGCAAGCTAG
Upstream 100 bases:
>100_bases GACGTGTTCAACAATCATAGTACTGAGTATTATAAGGATTTTTAAATTTATATTAGGAGCTCTACCTATTGCTTTAGCTG GCTGCGGTAGGGAAGATAAG
Downstream 100 bases:
>100_bases TGCAGGTAGAAAGATTGTAGGCTATGAATGGAAGGTTAATGGTACAAAGGTTGAGACTACTACTAATGTACTTCAACAAA CAGCGCCTGCTTTCAAAACT
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MEFEVAHEYVGHSCAVYVEPLSQTYVDQLVKKVMISEVRHDVRQVNHSLKWYGLEGSNYIDSDILTELDLKQCDDSVCDD TKNPVAYQFQQGQEYVSLDVLGKMTVNNKEYDINKKYNFVIELISAPVISGKCDDENVCVFSVTKDSEGGVKPYNYYWYD GYQNVAITKSTVDNGDFKYELKDNLKYNIVMSTGDKFGRNYSEDSNEVVVYADMYKAPTVEILSEDAVDEGKQALLAAEA VAYGNKTIQKDGYNWTVPEGWEIVSGQGTNLLVVKVPGYSKDMPKGKFSVVATDSEGIESNVATKEVAVLFDSSLKPTKP SLVAADLNGQKDVVEKKQYKVTALTTANGDRKIVKYIWKVNGEESETTTSVFTDVAPIYDSNGENKIKVTVIAVDSANQR SEESAELQIDVKTNTTIKLTRPSLSAADLNGQKDVVEKKEYKVTAYSAS
Sequences:
>Translated_449_residues MEFEVAHEYVGHSCAVYVEPLSQTYVDQLVKKVMISEVRHDVRQVNHSLKWYGLEGSNYIDSDILTELDLKQCDDSVCDD TKNPVAYQFQQGQEYVSLDVLGKMTVNNKEYDINKKYNFVIELISAPVISGKCDDENVCVFSVTKDSEGGVKPYNYYWYD GYQNVAITKSTVDNGDFKYELKDNLKYNIVMSTGDKFGRNYSEDSNEVVVYADMYKAPTVEILSEDAVDEGKQALLAAEA VAYGNKTIQKDGYNWTVPEGWEIVSGQGTNLLVVKVPGYSKDMPKGKFSVVATDSEGIESNVATKEVAVLFDSSLKPTKP SLVAADLNGQKDVVEKKQYKVTALTTANGDRKIVKYIWKVNGEESETTTSVFTDVAPIYDSNGENKIKVTVIAVDSANQR SEESAELQIDVKTNTTIKLTRPSLSAADLNGQKDVVEKKEYKVTAYSAS >Mature_449_residues MEFEVAHEYVGHSCAVYVEPLSQTYVDQLVKKVMISEVRHDVRQVNHSLKWYGLEGSNYIDSDILTELDLKQCDDSVCDD TKNPVAYQFQQGQEYVSLDVLGKMTVNNKEYDINKKYNFVIELISAPVISGKCDDENVCVFSVTKDSEGGVKPYNYYWYD GYQNVAITKSTVDNGDFKYELKDNLKYNIVMSTGDKFGRNYSEDSNEVVVYADMYKAPTVEILSEDAVDEGKQALLAAEA VAYGNKTIQKDGYNWTVPEGWEIVSGQGTNLLVVKVPGYSKDMPKGKFSVVATDSEGIESNVATKEVAVLFDSSLKPTKP SLVAADLNGQKDVVEKKQYKVTALTTANGDRKIVKYIWKVNGEESETTTSVFTDVAPIYDSNGENKIKVTVIAVDSANQR SEESAELQIDVKTNTTIKLTRPSLSAADLNGQKDVVEKKEYKVTAYSAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49947; Mature: 49947
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFEVAHEYVGHSCAVYVEPLSQTYVDQLVKKVMISEVRHDVRQVNHSLKWYGLEGSNYI CCCCHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC DSDILTELDLKQCDDSVCDDTKNPVAYQFQQGQEYVSLDVLGKMTVNNKEYDINKKYNFV CHHHHHHCCHHHCCCHHHCCCCCCEEEEEECCCEEEEEEEEEEEEECCCEEECCCCCEEE IELISAPVISGKCDDENVCVFSVTKDSEGGVKPYNYYWYDGYQNVAITKSTVDNGDFKYE EEEECCCEECCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEECCCCCEEEE LKDNLKYNIVMSTGDKFGRNYSEDSNEVVVYADMYKAPTVEILSEDAVDEGKQALLAAEA EECCCEEEEEEECCHHHCCCCCCCCCCEEEEEECCCCCCCEECCCCCHHHHHHHHHHHHH VAYGNKTIQKDGYNWTVPEGWEIVSGQGTNLLVVKVPGYSKDMPKGKFSVVATDSEGIES HHCCCCEEECCCCEECCCCCCEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCC NVATKEVAVLFDSSLKPTKPSLVAADLNGQKDVVEKKQYKVTALTTANGDRKIVKYIWKV CCCHHEEEEEECCCCCCCCCCEEEECCCCCHHHHHCCCEEEEEEEECCCCHHEEEEEEEC NGEESETTTSVFTDVAPIYDSNGENKIKVTVIAVDSANQRSEESAELQIDVKTNTTIKLT CCCCCCHHHHHHHHCCHHCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEE RPSLSAADLNGQKDVVEKKEYKVTAYSAS CCCCCCCCCCCCHHHHCCCCEEEEEEECC >Mature Secondary Structure MEFEVAHEYVGHSCAVYVEPLSQTYVDQLVKKVMISEVRHDVRQVNHSLKWYGLEGSNYI CCCCHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC DSDILTELDLKQCDDSVCDDTKNPVAYQFQQGQEYVSLDVLGKMTVNNKEYDINKKYNFV CHHHHHHCCHHHCCCHHHCCCCCCEEEEEECCCEEEEEEEEEEEEECCCEEECCCCCEEE IELISAPVISGKCDDENVCVFSVTKDSEGGVKPYNYYWYDGYQNVAITKSTVDNGDFKYE EEEECCCEECCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEECCCCCEEEE LKDNLKYNIVMSTGDKFGRNYSEDSNEVVVYADMYKAPTVEILSEDAVDEGKQALLAAEA EECCCEEEEEEECCHHHCCCCCCCCCCEEEEEECCCCCCCEECCCCCHHHHHHHHHHHHH VAYGNKTIQKDGYNWTVPEGWEIVSGQGTNLLVVKVPGYSKDMPKGKFSVVATDSEGIES HHCCCCEEECCCCEECCCCCCEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCC NVATKEVAVLFDSSLKPTKPSLVAADLNGQKDVVEKKQYKVTALTTANGDRKIVKYIWKV CCCHHEEEEEECCCCCCCCCCEEEECCCCCHHHHHCCCEEEEEEEECCCCHHEEEEEEEC NGEESETTTSVFTDVAPIYDSNGENKIKVTVIAVDSANQRSEESAELQIDVKTNTTIKLT CCCCCCHHHHHHHHCCHHCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEE RPSLSAADLNGQKDVVEKKEYKVTAYSAS CCCCCCCCCCCCHHHHCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA