| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256670
Identifier: 89256670
GI number: 89256670
Start: 1303481
End: 1304344
Strand: Reverse
Name: 89256670
Synonym: FTL_1371
Alternate gene names: NA
Gene position: 1304344-1303481 (Counterclockwise)
Preceding gene: 89256671
Following gene: 89256669
Centisome position: 68.79
GC content: 42.82
Gene sequence:
>864_bases GTGCAAGCTAGTGCAGGTAGAAAGATTGTAGGCTATGAATGGAAGGTTAATGGTACAAAGGTTGAGACTACTACTAATGT ACTTCAACAAACAGCGCCTGCTTTCAAAACTACAGCTGGAGCTGAAAATAAGATAAAAGTAACGGTAGTAGCTATAGACA ATGCTGGAGTAAGATCAGATGAATCAGCGGAGTTAGGTATAGCTGTTAAAGCTGATATGAGCATTAAACCAAGTACACCT TCTTTGAGCGCTCCTAATTTAGCGAATGAAAAGACTACAATTAAACTATCCGCAGAATCCAGTCCAAACGGAGACAGACA GATAAGAGAGTACGAGTGGAAGCTTGATGGTGTCGTGATTTCGGGTATGACGGCGAAGGGGATAGAAGTAACTCTACCAG AAACCAATCCAAGTAAGAGAAAGAATGTTTTTTCAGTTGTAGCGATTGATATAGCGGGTGTAAGGTCGGACCCTCAGTCC CGTGATGTAACTAATGTACCGGTGCTAGATACTTCAAAAAAAGTCTCGGAAAATGGGATCACAAGCAGCCAACTCTACCA ACCGTTATTAGATTTATTGAACGCACAGAAAGAAAAGACACATGCGACTTTTAGGTATGTTGATCAACAGCTCGGCAATC GATATAAAATGGTATGTGAGCCGGGTTACTCTTCCAGTAATAGACCCGGTATCGTAGGTCCGGCGTTCATAGCCGCAGCG CAATATATTCCACACACGGCGAACAGAGGTGATTGGGTATATGCTCACGATCATGGAATCATGGGAGCACCGGATTTCAA GTACGAGAAAGATTTTACAACGTTTGGTTTGAAGTTCTCTGGTGGATGTGGTCCTATACTGTAG
Upstream 100 bases:
>100_bases AATACTACAATCAAGCTGACAAGACCATCATTATCGGCGGCTGATTTAAATGGTCAGAAGGATGTAGTTGAGAAGAAAGA ATACAAAGTAACAGCCTACA
Downstream 100 bases:
>100_bases ATGTGTCACCAAATATCTGCAAGATGTTGATAGTAATGCAGATATACTTTCAAGCTTCTTATAAACTTCTTAATTATTTC CAATTCAAGTATATTTATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MQASAGRKIVGYEWKVNGTKVETTTNVLQQTAPAFKTTAGAENKIKVTVVAIDNAGVRSDESAELGIAVKADMSIKPSTP SLSAPNLANEKTTIKLSAESSPNGDRQIREYEWKLDGVVISGMTAKGIEVTLPETNPSKRKNVFSVVAIDIAGVRSDPQS RDVTNVPVLDTSKKVSENGITSSQLYQPLLDLLNAQKEKTHATFRYVDQQLGNRYKMVCEPGYSSSNRPGIVGPAFIAAA QYIPHTANRGDWVYAHDHGIMGAPDFKYEKDFTTFGLKFSGGCGPIL
Sequences:
>Translated_287_residues MQASAGRKIVGYEWKVNGTKVETTTNVLQQTAPAFKTTAGAENKIKVTVVAIDNAGVRSDESAELGIAVKADMSIKPSTP SLSAPNLANEKTTIKLSAESSPNGDRQIREYEWKLDGVVISGMTAKGIEVTLPETNPSKRKNVFSVVAIDIAGVRSDPQS RDVTNVPVLDTSKKVSENGITSSQLYQPLLDLLNAQKEKTHATFRYVDQQLGNRYKMVCEPGYSSSNRPGIVGPAFIAAA QYIPHTANRGDWVYAHDHGIMGAPDFKYEKDFTTFGLKFSGGCGPIL >Mature_287_residues MQASAGRKIVGYEWKVNGTKVETTTNVLQQTAPAFKTTAGAENKIKVTVVAIDNAGVRSDESAELGIAVKADMSIKPSTP SLSAPNLANEKTTIKLSAESSPNGDRQIREYEWKLDGVVISGMTAKGIEVTLPETNPSKRKNVFSVVAIDIAGVRSDPQS RDVTNVPVLDTSKKVSENGITSSQLYQPLLDLLNAQKEKTHATFRYVDQQLGNRYKMVCEPGYSSSNRPGIVGPAFIAAA QYIPHTANRGDWVYAHDHGIMGAPDFKYEKDFTTFGLKFSGGCGPIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31010; Mature: 31010
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQASAGRKIVGYEWKVNGTKVETTTNVLQQTAPAFKTTAGAENKIKVTVVAIDNAGVRSD CCCCCCCEEEEEEEEECCEEEEHHHHHHHHHCCCHHHCCCCCCEEEEEEEEECCCCCCCC ESAELGIAVKADMSIKPSTPSLSAPNLANEKTTIKLSAESSPNGDRQIREYEWKLDGVVI CCCEEEEEEEECCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCEEE SGMTAKGIEVTLPETNPSKRKNVFSVVAIDIAGVRSDPQSRDVTNVPVLDTSKKVSENGI ECCEECCEEEEECCCCCHHHHCEEEEEEEEEECCCCCCCCCCCCCCCEECCCCHHHHCCC TSSQLYQPLLDLLNAQKEKTHATFRYVDQQLGNRYKMVCEPGYSSSNRPGIVGPAFIAAA CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHH QYIPHTANRGDWVYAHDHGIMGAPDFKYEKDFTTFGLKFSGGCGPIL HHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCC >Mature Secondary Structure MQASAGRKIVGYEWKVNGTKVETTTNVLQQTAPAFKTTAGAENKIKVTVVAIDNAGVRSD CCCCCCCEEEEEEEEECCEEEEHHHHHHHHHCCCHHHCCCCCCEEEEEEEEECCCCCCCC ESAELGIAVKADMSIKPSTPSLSAPNLANEKTTIKLSAESSPNGDRQIREYEWKLDGVVI CCCEEEEEEEECCEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCEEE SGMTAKGIEVTLPETNPSKRKNVFSVVAIDIAGVRSDPQSRDVTNVPVLDTSKKVSENGI ECCEECCEEEEECCCCCHHHHCEEEEEEEEEECCCCCCCCCCCCCCCEECCCCHHHHCCC TSSQLYQPLLDLLNAQKEKTHATFRYVDQQLGNRYKMVCEPGYSSSNRPGIVGPAFIAAA CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHH QYIPHTANRGDWVYAHDHGIMGAPDFKYEKDFTTFGLKFSGGCGPIL HHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA