Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is yjeK [H]

Identifier: 89256661

GI number: 89256661

Start: 1295070

End: 1296056

Strand: Reverse

Name: yjeK [H]

Synonym: FTL_1362

Alternate gene names: 89256661

Gene position: 1296056-1295070 (Counterclockwise)

Preceding gene: 89256663

Following gene: 89256659

Centisome position: 68.36

GC content: 31.81

Gene sequence:

>987_bases
ATGTCTACTAATGATTGGAAAAAAGTACTTAAAGAATCTTTCTCTTCACCTTTAGAATTATTAGAGTTTTTGGAAATAGA
TAGTGAAGAAGCCAAAGTTTCATTAAATATAGCCAAGAAGTTTAAAATGATAGTGCCTAGATCATTTGCTGATAGAATGC
AAAAAGGTAATATCAACGATCCTTTGCTCAAACAAGTTTTGCCAACTGCCGATGAGGAAGTGATAGATCAAGCCTATAGT
AGCGATCCACTTGATGAAAAAAACTATAATAAAGTTCCTGGGTTACTACACAAATATCATGGTAGAGTTCTGCTGATAGC
ACAAACAATCTGTGCGGTGCATTGTCGCTATTGTTTTCGTAAAGAGTTTGACTATAAAGAAAATATCCCCGGTAGAAAAG
ATTGGTTGCAAGCCTTTGAATATATAGCAAATGACCAAAGTATTGAGGAAGTCATATTAAGTGGAGGAGATCCTCTCTTA
AATAACGATGAAATATTAGAATTTTTTATAGAAAATATCCAGCGAATATCTCATATCAAAAGGCTTAGAATTCATTCAAG
AATACCTGTAGTGCTACCAGAGCGAATGACTACTAAACTTTTGAAAATTCTTTCAGAGCATAGACTTGATACTGTATTAG
TAATACATGTGAATCATCCAAATGAGCTAGATGGTAATGTTAGTAAAGTTTTAAAAGAAATACATAAACACGGCATAATT
ATCCTAAATCAAAGTACATTACTTAAAGATATAAATGATGATGCTAATGTATTATATGCTTTGAGTACAAAACTTATAAA
TGCAAAAGTAATTCCATACTATATACATTCACTAGATACTGTCTCAGGGACTAAACACTATAATGTTGATAATGATAAAG
ATATTATGAAAAAGCTTTCAGAAATTTCATCAGGATTTATGGTGCCTGTGTTGACCAAAGAAATTCCAGGATATCCATCG
AAGAAATGGCTATCTTTTCATAGCTAA

Upstream 100 bases:

>100_bases
GATATATTTTCATTTAAAAAATTGACAATTTGATGCCATATGAGAGAATTGGCAGATATCAAAAAATCACCTAGCAATTA
CAGCAAACTAATACAAATAT

Downstream 100 bases:

>100_bases
TTGAAGAATAAAAATATGAATTTGTTTTCTTAAGAAAGACTGTCCCTACAGTTATATAAGGATAATTAGATTAGATAGAT
TTTATATTAACAGCAGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSTNDWKKVLKESFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYS
SDPLDEKNYNKVPGLLHKYHGRVLLIAQTICAVHCRYCFRKEFDYKENIPGRKDWLQAFEYIANDQSIEEVILSGGDPLL
NNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGII
ILNQSTLLKDINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPS
KKWLSFHS

Sequences:

>Translated_328_residues
MSTNDWKKVLKESFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYS
SDPLDEKNYNKVPGLLHKYHGRVLLIAQTICAVHCRYCFRKEFDYKENIPGRKDWLQAFEYIANDQSIEEVILSGGDPLL
NNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGII
ILNQSTLLKDINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPS
KKWLSFHS
>Mature_327_residues
STNDWKKVLKESFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSS
DPLDEKNYNKVPGLLHKYHGRVLLIAQTICAVHCRYCFRKEFDYKENIPGRKDWLQAFEYIANDQSIEEVILSGGDPLLN
NDEILEFFIENIQRISHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIII
LNQSTLLKDINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSK
KWLSFHS

Specific function: With YjeA might be involved in the post-translational modification of elongation factor P (EF-P) [H]

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=329, Percent_Identity=46.5045592705167, Blast_Score=315, Evalue=3e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR022462
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37742; Mature: 37611

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNDWKKVLKESFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNIND
CCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHEEEHHHHHHHHHHCCHHHHHHHHCCCCCC
PLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTICAVHCRYCFR
HHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH
KEFDYKENIPGRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIK
HCCCHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
RLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGII
HHHHHCCCCEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCEE
ILNQSTLLKDINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDKDIMKKLS
EEECHHHHHHCCCCHHEEHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
EISSGFMVPVLTKEIPGYPSKKWLSFHS
HHHCCCEEEHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
STNDWKKVLKESFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNIND
CCHHHHHHHHHHHCCHHHHHHHHHCCCCHHEEEHHHHHHHHHHCCHHHHHHHHCCCCCC
PLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTICAVHCRYCFR
HHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHH
KEFDYKENIPGRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIK
HCCCHHCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
RLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGII
HHHHHCCCCEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCEE
ILNQSTLLKDINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDKDIMKKLS
EEECHHHHHHCCCCHHEEHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
EISSGFMVPVLTKEIPGYPSKKWLSFHS
HHHCCCEEEHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]