Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is yitW [H]

Identifier: 89256635

GI number: 89256635

Start: 1266390

End: 1266941

Strand: Reverse

Name: yitW [H]

Synonym: FTL_1331

Alternate gene names: 89256635

Gene position: 1266941-1266390 (Counterclockwise)

Preceding gene: 89256636

Following gene: 89256634

Centisome position: 66.82

GC content: 34.06

Gene sequence:

>552_bases
ATGAAACCAACAGATGTAACAATAATAAGAAGACAGGTAAAAGCAATTGCTGTACCATTTGGTAATGAGATTGAGTTAAT
GCCTGGTCAAGAAGTTTTAGTAACGCAAGATAAGGGTGGAAGCTTTACTTTAAATGTAAACGGTAATTTACTTCATCTAG
ATGGTAAAGATGCTGATGCGATAGGTAAGCAAATCATCAGATATCCTGTAGAGGGGTATGATATTAAGCCAGGTGATCCA
ATTAATATGGATGCTATTTGGGATCAAATGAGAACAGTTTATGATCCTGAAATTCCTGTCAATATTGTTGATCTTGGTTT
GATTTATAATATTATTACTAGAAAGTTAGAGAATGGTAATTTTCATGTAATAATTGATATGACATTAACAGCACCTGGTT
GTGGTATGGGACCAGTGCTTATGACAGATGTTGAAAAAAGAGTAGCAATGCTTCCTAATGTTGATAAAGTTGATGTAGTA
ATGGTTTTTGATCCGCCATGGAATTCAGAAATGATGACTGAAGCTGCTAAGTTAGAGTTAGGTTTATTTTAG

Upstream 100 bases:

>100_bases
AAGCATGATTTTGGATTATATAAGTTAGAATATACAAATCCAAACGAATCAGCACGTTGTGGTTGTGGTGAAAGTTTTAC
AGTTTAGGAATATATAAATA

Downstream 100 bases:

>100_bases
TAATTTAGCTTATGAATAAGATAGCAATTTATCCAGGTACTTTTGACCCAATTACCAATGGTCATGTTGATCTAGTAGAG
CGTGCATTAAATATCTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKPTDVTIIRRQVKAIAVPFGNEIELMPGQEVLVTQDKGGSFTLNVNGNLLHLDGKDADAIGKQIIRYPVEGYDIKPGDP
INMDAIWDQMRTVYDPEIPVNIVDLGLIYNIITRKLENGNFHVIIDMTLTAPGCGMGPVLMTDVEKRVAMLPNVDKVDVV
MVFDPPWNSEMMTEAAKLELGLF

Sequences:

>Translated_183_residues
MKPTDVTIIRRQVKAIAVPFGNEIELMPGQEVLVTQDKGGSFTLNVNGNLLHLDGKDADAIGKQIIRYPVEGYDIKPGDP
INMDAIWDQMRTVYDPEIPVNIVDLGLIYNIITRKLENGNFHVIIDMTLTAPGCGMGPVLMTDVEKRVAMLPNVDKVDVV
MVFDPPWNSEMMTEAAKLELGLF
>Mature_183_residues
MKPTDVTIIRRQVKAIAVPFGNEIELMPGQEVLVTQDKGGSFTLNVNGNLLHLDGKDADAIGKQIIRYPVEGYDIKPGDP
INMDAIWDQMRTVYDPEIPVNIVDLGLIYNIITRKLENGNFHVIIDMTLTAPGCGMGPVLMTDVEKRVAMLPNVDKVDVV
MVFDPPWNSEMMTEAAKLELGLF

Specific function: May Be Part Of A Multicomponent Oxygenase Involved In Phenylacetyl-CoA Hydroxylation. [C]

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MIP18 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002744 [H]

Pfam domain/function: PF01883 DUF59 [H]

EC number: NA

Molecular weight: Translated: 20295; Mature: 20295

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTDVTIIRRQVKAIAVPFGNEIELMPGQEVLVTQDKGGSFTLNVNGNLLHLDGKDADA
CCCCCHHHHEEEEEEEECCCCCEEEECCCCEEEEEECCCCEEEEEECCCEEEECCCCHHH
IGKQIIRYPVEGYDIKPGDPINMDAIWDQMRTVYDPEIPVNIVDLGLIYNIITRKLENGN
HHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCC
FHVIIDMTLTAPGCGMGPVLMTDVEKRVAMLPNVDKVDVVMVFDPPWNSEMMTEAAKLEL
EEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHEEE
GLF
CCC
>Mature Secondary Structure
MKPTDVTIIRRQVKAIAVPFGNEIELMPGQEVLVTQDKGGSFTLNVNGNLLHLDGKDADA
CCCCCHHHHEEEEEEEECCCCCEEEECCCCEEEEEECCCCEEEEEECCCEEEECCCCHHH
IGKQIIRYPVEGYDIKPGDPINMDAIWDQMRTVYDPEIPVNIVDLGLIYNIITRKLENGN
HHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCCC
FHVIIDMTLTAPGCGMGPVLMTDVEKRVAMLPNVDKVDVVMVFDPPWNSEMMTEAAKLEL
EEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHEEE
GLF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]